| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
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The map label for this gene is 123966624
Identifier: 123966624
GI number: 123966624
Start: 1228628
End: 1229422
Strand: Direct
Name: 123966624
Synonym: P9515_13911
Alternate gene names: NA
Gene position: 1228628-1229422 (Clockwise)
Preceding gene: 123966623
Following gene: 123966627
Centisome position: 72.1
GC content: 23.9
Gene sequence:
>795_bases ATGTTTTTAAAAAAAATAAAGAAAAATTTTCCTTTTAGGATAATTTCAAAAAATAAGTTTGATTTTACAGATAGAGGTGG GAAATTCAAGAAATATGAAATATACAATTTATTTAATAAAAAAGAAAAAGAAATCCTATCTAATGAGTTTATAAATTACT CATTTTCTCAGTTAGGTCAAGACTTAATTGCAATAGTATTAGCAGAAGGAAAACAAGAAGGATATTTTGTAGAATTTGGA GCCTGCGATGGTATAAGACATAGTAATACTTTTGCTTTAGAAAAAATATTTAACTGGAATGGTATACTCGCCGAACCTTC AAAAGTTTGGCATGATTCTTTAATAAAGAACAGAAATTGTTTAATTGATAAAAGATGTGTTTATTCAGAAAGTGATCTTC TAATGCCATTTTTTGAAGTGCAAAAAAACAAAAATATTTCTCATGGTGCATCATCTCTTTCCAGATTTGCAAATAATGGG GACTGGGCAAGTAAATTAAGATTAGAAAATTATATAGAATATGAAGTTAAAACTATTTCTTTAAATGATCTTTTAGAAGA AAACAATGCACCAAATAAAATTGATTTCATGTCTATAGATACTGAGGGAAGTGAGTTAGAAATAATAAAGAATTTCAATT TTAATAAATATAAAATAAAATTTCTATGTATTGAACATAATTTTGTAAATAAAACTAGGAAAGAAATAAATCAAATACTT ACATTGAATGGTTATAAACAAATATATAAAAAATTATCAGAATTTGATGATTGGTATATATATATAAATTTCTAA
Upstream 100 bases:
>100_bases TATTTTTAAAGTGAAATCCTCAAGTGCATCACTAGTAAAAAAAACTAAGAATTTAATAAGATATTATCAATACAAATTTT TTTCTATAGAGTAATACTTG
Downstream 100 bases:
>100_bases ATTATTCATATTACTAAGATTTTTTGTTATTAAAACTATCAACTAGACATATACATTTTTGACAAATATAATTTGCCCAT ACCTGATCATAATGGGTTGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 264; Mature: 264
Protein sequence:
>264_residues MFLKKIKKNFPFRIISKNKFDFTDRGGKFKKYEIYNLFNKKEKEILSNEFINYSFSQLGQDLIAIVLAEGKQEGYFVEFG ACDGIRHSNTFALEKIFNWNGILAEPSKVWHDSLIKNRNCLIDKRCVYSESDLLMPFFEVQKNKNISHGASSLSRFANNG DWASKLRLENYIEYEVKTISLNDLLEENNAPNKIDFMSIDTEGSELEIIKNFNFNKYKIKFLCIEHNFVNKTRKEINQIL TLNGYKQIYKKLSEFDDWYIYINF
Sequences:
>Translated_264_residues MFLKKIKKNFPFRIISKNKFDFTDRGGKFKKYEIYNLFNKKEKEILSNEFINYSFSQLGQDLIAIVLAEGKQEGYFVEFG ACDGIRHSNTFALEKIFNWNGILAEPSKVWHDSLIKNRNCLIDKRCVYSESDLLMPFFEVQKNKNISHGASSLSRFANNG DWASKLRLENYIEYEVKTISLNDLLEENNAPNKIDFMSIDTEGSELEIIKNFNFNKYKIKFLCIEHNFVNKTRKEINQIL TLNGYKQIYKKLSEFDDWYIYINF >Mature_264_residues MFLKKIKKNFPFRIISKNKFDFTDRGGKFKKYEIYNLFNKKEKEILSNEFINYSFSQLGQDLIAIVLAEGKQEGYFVEFG ACDGIRHSNTFALEKIFNWNGILAEPSKVWHDSLIKNRNCLIDKRCVYSESDLLMPFFEVQKNKNISHGASSLSRFANNG DWASKLRLENYIEYEVKTISLNDLLEENNAPNKIDFMSIDTEGSELEIIKNFNFNKYKIKFLCIEHNFVNKTRKEINQIL TLNGYKQIYKKLSEFDDWYIYINF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31223; Mature: 31223
Theoretical pI: Translated: 8.77; Mature: 8.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFLKKIKKNFPFRIISKNKFDFTDRGGKFKKYEIYNLFNKKEKEILSNEFINYSFSQLGQ CCHHHHHHCCCEEEEECCCCCCCCCCCCEEEEEHHHHHCHHHHHHHHHHHCCCCHHHHHH DLIAIVLAEGKQEGYFVEFGACDGIRHSNTFALEKIFNWNGILAEPSKVWHDSLIKNRNC HHEEEHEECCCCCCEEEEEECCCCCCCCCCEEEHHHCCCCCEEECCHHHHHHHHHCCCCC LIDKRCVYSESDLLMPFFEVQKNKNISHGASSLSRFANNGDWASKLRLENYIEYEVKTIS EEECCCEECCCCCCCHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHEEEEEEEEEE LNDLLEENNAPNKIDFMSIDTEGSELEIIKNFNFNKYKIKFLCIEHNFVNKTRKEINQIL HHHHHHHCCCCCEEEEEEECCCCCEEEEEECCCCCEEEEEEEEEECCHHHHHHHHHHHHE TLNGYKQIYKKLSEFDDWYIYINF ECCCHHHHHHHHHCCCCEEEEEEC >Mature Secondary Structure MFLKKIKKNFPFRIISKNKFDFTDRGGKFKKYEIYNLFNKKEKEILSNEFINYSFSQLGQ CCHHHHHHCCCEEEEECCCCCCCCCCCCEEEEEHHHHHCHHHHHHHHHHHCCCCHHHHHH DLIAIVLAEGKQEGYFVEFGACDGIRHSNTFALEKIFNWNGILAEPSKVWHDSLIKNRNC HHEEEHEECCCCCCEEEEEECCCCCCCCCCEEEHHHCCCCCEEECCHHHHHHHHHCCCCC LIDKRCVYSESDLLMPFFEVQKNKNISHGASSLSRFANNGDWASKLRLENYIEYEVKTIS EEECCCEECCCCCCCHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHEEEEEEEEEE LNDLLEENNAPNKIDFMSIDTEGSELEIIKNFNFNKYKIKFLCIEHNFVNKTRKEINQIL HHHHHHHCCCCCEEEEEEECCCCCEEEEEECCCCCEEEEEEEEEECCHHHHHHHHHHHHE TLNGYKQIYKKLSEFDDWYIYINF ECCCHHHHHHHHHCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA