| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
Click here to switch to the map view.
The map label for this gene is 123966610
Identifier: 123966610
GI number: 123966610
Start: 1211498
End: 1212577
Strand: Reverse
Name: 123966610
Synonym: P9515_13771
Alternate gene names: NA
Gene position: 1212577-1211498 (Counterclockwise)
Preceding gene: 123966611
Following gene: 123966609
Centisome position: 71.15
GC content: 25.65
Gene sequence:
>1080_bases ATGATGAAAGTTTTACATATATCTTATTCTTATGACTTCAAAGATGGCGGCATAACAACTGTTGTTGAACAATTAATAAG AGAACAAAAAAAAACTAAAATAAAAGTTGAATGGTTAGCAAGTAATCTTTTTCTAAGTCCTTTTAAACGTAAAAAATTAA TCAAAGAAATTTTAAAAATCAATCCAACAATTGTTCATTTACATGGTCTTTGGAGAGTTCATACAAGAATTACTAATGAT TTATTAAAAGCAGATATCCCATATGTTATTACTCCACATGGAATGTTGGATAAATGGGCTTTAAATCAATCACAATTAAA GAAAATAATATCTTGGTATTTATGGGAAAAAAAAGCATTAAATAATAGTTCATTTATTCAAGTACTTTCATCTGGAGAAT TTGAAGCTATAAAAAAAATAAATTCTGCATGGAAATGTCATCTAATTTCAAATGGTATATTTATGCCTCAAAAGAAAGAA TTGAAGTTAAATGAATATCCTAAATCTTGGGAAGATAAAATTCCTAGAAATTCAAATGTATTACTTTTTTTAGGCAGATT TCATAAAAAAAAGGGTATTAATGAGTTAATCAAAGCATGGGAGATTGTATCAAAATATTCATATAGCAAAAATTGGTGGA TTTGCTTTGCGGGTTCTGGAAATTTGAAGATACTTAAAAAATTTGATAATAAATCGTTAATAAAAAGAATTATTGTTTCA AAACCAGTTTTTGATTTAGAAAAAGAAAAAGTATTTCGAAATTCTTCTGCTTTTATTCTAAGTTCATTTTCAGAAGGATT ACCTATGGCTGCTTTGGAGGCTATGTCTTATGGGATTCCATGCTTAATAAGTGAAAATTGTAATCTTTCTGAAACTCTAA ATATTGGTGCTGCAATAAAAACTAATCCATCAGTAAATGAAATCATTAAATCTTTAAAATATTTAATAAAAATGGATGAT AATGAGAAAAAAAAGATTTCAAAACTTGCCTATAATTATGTTTCTATAAATCATAATTGGTCTAATTTAACATCCCAATT AAATGATTTATATAGATCAGTTTGTGAAGATATCTTATGA
Upstream 100 bases:
>100_bases TAGTGTTTACTAGAGGATATTTACTTCAATTGACTTTTTTATATTTTACAATTTTTATTCCTTTCCATTATTTTTCTAAT ATTTGGAATAAAAGATATAG
Downstream 100 bases:
>100_bases AATTGTAAATATTTAAAATAATTAAAGATGTTTAATATAAATTTAAAATAAGGAAATTATTGATAATGCGACTTCAAAAT TTAAATTTATATGAAAAGAA
Product: hypothetical protein
Products: NA
Alternate protein names: Glycosyl Transferase Group 1 Family Protein; Glycosyltransferase; Glycosyl Transferase Group 1 Family; Glycosyl Transferase Group 1 Protein; Glycosyl Transferase; LPS Biosynthesis RfbU Related Protein; Glycosyl Transferase GT4 Family; Poly(Glycerol-Phosphate) Alpha-Glucosyltransferase; Transferase; A-Glycosyltransferase; Glycosyltransferase Family 4 Protein; Glycosyl Transferase Family Protein
Number of amino acids: Translated: 359; Mature: 359
Protein sequence:
>359_residues MMKVLHISYSYDFKDGGITTVVEQLIREQKKTKIKVEWLASNLFLSPFKRKKLIKEILKINPTIVHLHGLWRVHTRITND LLKADIPYVITPHGMLDKWALNQSQLKKIISWYLWEKKALNNSSFIQVLSSGEFEAIKKINSAWKCHLISNGIFMPQKKE LKLNEYPKSWEDKIPRNSNVLLFLGRFHKKKGINELIKAWEIVSKYSYSKNWWICFAGSGNLKILKKFDNKSLIKRIIVS KPVFDLEKEKVFRNSSAFILSSFSEGLPMAALEAMSYGIPCLISENCNLSETLNIGAAIKTNPSVNEIIKSLKYLIKMDD NEKKKISKLAYNYVSINHNWSNLTSQLNDLYRSVCEDIL
Sequences:
>Translated_359_residues MMKVLHISYSYDFKDGGITTVVEQLIREQKKTKIKVEWLASNLFLSPFKRKKLIKEILKINPTIVHLHGLWRVHTRITND LLKADIPYVITPHGMLDKWALNQSQLKKIISWYLWEKKALNNSSFIQVLSSGEFEAIKKINSAWKCHLISNGIFMPQKKE LKLNEYPKSWEDKIPRNSNVLLFLGRFHKKKGINELIKAWEIVSKYSYSKNWWICFAGSGNLKILKKFDNKSLIKRIIVS KPVFDLEKEKVFRNSSAFILSSFSEGLPMAALEAMSYGIPCLISENCNLSETLNIGAAIKTNPSVNEIIKSLKYLIKMDD NEKKKISKLAYNYVSINHNWSNLTSQLNDLYRSVCEDIL >Mature_359_residues MMKVLHISYSYDFKDGGITTVVEQLIREQKKTKIKVEWLASNLFLSPFKRKKLIKEILKINPTIVHLHGLWRVHTRITND LLKADIPYVITPHGMLDKWALNQSQLKKIISWYLWEKKALNNSSFIQVLSSGEFEAIKKINSAWKCHLISNGIFMPQKKE LKLNEYPKSWEDKIPRNSNVLLFLGRFHKKKGINELIKAWEIVSKYSYSKNWWICFAGSGNLKILKKFDNKSLIKRIIVS KPVFDLEKEKVFRNSSAFILSSFSEGLPMAALEAMSYGIPCLISENCNLSETLNIGAAIKTNPSVNEIIKSLKYLIKMDD NEKKKISKLAYNYVSINHNWSNLTSQLNDLYRSVCEDIL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41577; Mature: 41577
Theoretical pI: Translated: 10.24; Mature: 10.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMKVLHISYSYDFKDGGITTVVEQLIREQKKTKIKVEWLASNLFLSPFKRKKLIKEILKI CEEEEEEEEEEECCCCCHHHHHHHHHHHHHHCEEEEEEEHHHHHHCHHHHHHHHHHHHHC NPTIVHLHGLWRVHTRITNDLLKADIPYVITPHGMLDKWALNQSQLKKIISWYLWEKKAL CCEEEEEEHHHHHHHHHHHHHHHCCCCEEECCCCCHHHHCCCHHHHHHHHHHHHHHHHHC NNSSFIQVLSSGEFEAIKKINSAWKCHLISNGIFMPQKKELKLNEYPKSWEDKIPRNSNV CCCHHHHHHCCCCHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCCCHHHCCCCCCCE LLFLGRFHKKKGINELIKAWEIVSKYSYSKNWWICFAGSGNLKILKKFDNKSLIKRIIVS EEEEECHHHHCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEECCCHHHHHHHHHC KPVFDLEKEKVFRNSSAFILSSFSEGLPMAALEAMSYGIPCLISENCNLSETLNIGAAIK CCCCCCHHHHHHCCCCHHEEEHHCCCCCHHHHHHHHCCCCEEEECCCCCHHHCCCCEEEE TNPSVNEIIKSLKYLIKMDDNEKKKISKLAYNYVSINHNWSNLTSQLNDLYRSVCEDIL CCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHEEEEECCHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MMKVLHISYSYDFKDGGITTVVEQLIREQKKTKIKVEWLASNLFLSPFKRKKLIKEILKI CEEEEEEEEEEECCCCCHHHHHHHHHHHHHHCEEEEEEEHHHHHHCHHHHHHHHHHHHHC NPTIVHLHGLWRVHTRITNDLLKADIPYVITPHGMLDKWALNQSQLKKIISWYLWEKKAL CCEEEEEEHHHHHHHHHHHHHHHCCCCEEECCCCCHHHHCCCHHHHHHHHHHHHHHHHHC NNSSFIQVLSSGEFEAIKKINSAWKCHLISNGIFMPQKKELKLNEYPKSWEDKIPRNSNV CCCHHHHHHCCCCHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCCCHHHCCCCCCCE LLFLGRFHKKKGINELIKAWEIVSKYSYSKNWWICFAGSGNLKILKKFDNKSLIKRIIVS EEEEECHHHHCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEECCCHHHHHHHHHC KPVFDLEKEKVFRNSSAFILSSFSEGLPMAALEAMSYGIPCLISENCNLSETLNIGAAIK CCCCCCHHHHHHCCCCHHEEEHHCCCCCHHHHHHHHCCCCEEEECCCCCHHHCCCCEEEE TNPSVNEIIKSLKYLIKMDDNEKKKISKLAYNYVSINHNWSNLTSQLNDLYRSVCEDIL CCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHEEEEECCHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA