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The map label for this gene is yidC [H]

Identifier: 123966591

GI number: 123966591

Start: 1189542

End: 1190681

Strand: Direct

Name: yidC [H]

Synonym: P9515_13581

Alternate gene names: 123966591

Gene position: 1189542-1190681 (Clockwise)

Preceding gene: 123966590

Following gene: 123966592

Centisome position: 69.8

GC content: 35.09

Gene sequence:

>1140_bases
GTGATCGGGTTCATTTCAGAAAAACTACTAATCCCGATTCTAGATTTTTTCTATGGATTAGTTCCAAGTTACGGATTAGC
AATTGTTGCACTAACTGTTGTAATTAGAATTGCGCTATTCCCTCTCAGCGCAGGATCTATAAGAAGCGCTAGAAGAATGA
AAATAGCTCAACCTGTAATGCAAAAGAGGCAAGCGGAGATTAAATCAAAATTTTCAGGTGATCCAAAAAAACAACAAGAA
GAACTTGGTAAATTAATGAATGAATTTGGTAGCCCTCTTGCAGGTTGTTTACCTTTAATAGTTCAAATGCCTGTTTTATT
TGCCTTATTCGCGACACTAAGAGGTTCACCATTTGCAGATGTTCCTTATAATATAAATCTAAAAGTTTTACCCCAAGAAC
AAATAGCAGCTATTGATCCAAAACCCTATAAATCCCCAAGACATTCTATATTTGTAACAGAAAAGTCCCATTTCCCTGTT
GTAGCGACATTACCTAACGGCACAAAACTAGGTTCTGAAGAGTCAGTAAAGATAAACTTGCAGACAACTAATGGTAATAG
TTATTCTGAAGTCCTTTCAAAATATGATAATGGCTCAAAATTTCTTCCTACTTGGACAGTTTCAAAAGGTTCAGAAAACA
TCAAGGTTTCTCAAGATGGTTTAGTTACGGCTATCAAACCTGGTGATGCAACTATAGAAGCTAAAATTCCTGGCCTCGCT
GCAAAAAGTGGATTTTTGTTTATAAAAGCTCTTGGTCAGGTTGGATTCTATGTGGATGGTTCAATAAACTGGGATATAGC
TACATTAGTTGGGGCTTTCGGATTAACCTTGCTTCTATCACAGGTTTTATCTAGTCAAGGGATGCCTTCAAACGCTCAAC
AATCTACTGCAAACAAAATTACTCCAGTAATGATTACTGGAATGTTCTTATTTTTCCCTTTACCTGCAGGTGTATTGCTA
TATATGGTTGTAGCGAACATTTTCCAAGCTTTTCAAACTTTTCTTCTTAATAAAGAAGCTCTTCCATCAAACTTACAAAA
AATTCTGGATGAACAATTAATAAATAAAAATAAAGTAATTCCTTCTACTGCCAATGTCTCAGATAAAAGATTACCATTTG
AACCTAACAACAAAAAATAA

Upstream 100 bases:

>100_bases
GGTTGAAGGATTTGCTACGAAATCTTGAAAATTTTAATTACAAAAGTGTTTTTATCCTGTAAGATAAAGTTTCAAATAAA
ATTTTAATTGTCTTAGTATT

Downstream 100 bases:

>100_bases
TCATATCTCTTATCAAAAATAATGGATTCTTGGAGTAAAAATTTAGAATTACTTATCAAATCAAGAACTCCTTTAATTTG
GATAAGAACGAAAGAAGAAG

Product: putative inner membrane protein translocase component YidC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 379; Mature: 379

Protein sequence:

>379_residues
MIGFISEKLLIPILDFFYGLVPSYGLAIVALTVVIRIALFPLSAGSIRSARRMKIAQPVMQKRQAEIKSKFSGDPKKQQE
ELGKLMNEFGSPLAGCLPLIVQMPVLFALFATLRGSPFADVPYNINLKVLPQEQIAAIDPKPYKSPRHSIFVTEKSHFPV
VATLPNGTKLGSEESVKINLQTTNGNSYSEVLSKYDNGSKFLPTWTVSKGSENIKVSQDGLVTAIKPGDATIEAKIPGLA
AKSGFLFIKALGQVGFYVDGSINWDIATLVGAFGLTLLLSQVLSSQGMPSNAQQSTANKITPVMITGMFLFFPLPAGVLL
YMVVANIFQAFQTFLLNKEALPSNLQKILDEQLINKNKVIPSTANVSDKRLPFEPNNKK

Sequences:

>Translated_379_residues
MIGFISEKLLIPILDFFYGLVPSYGLAIVALTVVIRIALFPLSAGSIRSARRMKIAQPVMQKRQAEIKSKFSGDPKKQQE
ELGKLMNEFGSPLAGCLPLIVQMPVLFALFATLRGSPFADVPYNINLKVLPQEQIAAIDPKPYKSPRHSIFVTEKSHFPV
VATLPNGTKLGSEESVKINLQTTNGNSYSEVLSKYDNGSKFLPTWTVSKGSENIKVSQDGLVTAIKPGDATIEAKIPGLA
AKSGFLFIKALGQVGFYVDGSINWDIATLVGAFGLTLLLSQVLSSQGMPSNAQQSTANKITPVMITGMFLFFPLPAGVLL
YMVVANIFQAFQTFLLNKEALPSNLQKILDEQLINKNKVIPSTANVSDKRLPFEPNNKK
>Mature_379_residues
MIGFISEKLLIPILDFFYGLVPSYGLAIVALTVVIRIALFPLSAGSIRSARRMKIAQPVMQKRQAEIKSKFSGDPKKQQE
ELGKLMNEFGSPLAGCLPLIVQMPVLFALFATLRGSPFADVPYNINLKVLPQEQIAAIDPKPYKSPRHSIFVTEKSHFPV
VATLPNGTKLGSEESVKINLQTTNGNSYSEVLSKYDNGSKFLPTWTVSKGSENIKVSQDGLVTAIKPGDATIEAKIPGLA
AKSGFLFIKALGQVGFYVDGSINWDIATLVGAFGLTLLLSQVLSSQGMPSNAQQSTANKITPVMITGMFLFFPLPAGVLL
YMVVANIFQAFQTFLLNKEALPSNLQKILDEQLINKNKVIPSTANVSDKRLPFEPNNKK

Specific function: Required for the insertion of integral membrane proteins into the membrane. Probably plays an essential role in the integration of proteins of the respiratory chain complexes. Involved in integration of membrane proteins that insert dependently and indepe

COG id: COG0706

COG function: function code U; Preprotein translocase subunit YidC

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the OXA1/oxaA family. Type 1 subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790140, Length=126, Percent_Identity=31.7460317460317, Blast_Score=70, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001708 [H]

Pfam domain/function: PF02096 60KD_IMP [H]

EC number: NA

Molecular weight: Translated: 41277; Mature: 41277

Theoretical pI: Translated: 10.17; Mature: 10.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIGFISEKLLIPILDFFYGLVPSYGLAIVALTVVIRIALFPLSAGSIRSARRMKIAQPVM
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
QKRQAEIKSKFSGDPKKQQEELGKLMNEFGSPLAGCLPLIVQMPVLFALFATLRGSPFAD
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
VPYNINLKVLPQEQIAAIDPKPYKSPRHSIFVTEKSHFPVVATLPNGTKLGSEESVKINL
CCEECEEEEECHHHHHCCCCCCCCCCCCEEEEEECCCCCEEEECCCCCCCCCCCEEEEEE
QTTNGNSYSEVLSKYDNGSKFLPTWTVSKGSENIKVSQDGLVTAIKPGDATIEAKIPGLA
EECCCCCHHHHHHHCCCCCEECEEEEECCCCCCEEEECCCCEEEECCCCCEEEEECCCCC
AKSGFLFIKALGQVGFYVDGSINWDIATLVGAFGLTLLLSQVLSSQGMPSNAQQSTANKI
CCCCHHHEEEHHCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCC
TPVMITGMFLFFPLPAGVLLYMVVANIFQAFQTFLLNKEALPSNLQKILDEQLINKNKVI
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCC
PSTANVSDKRLPFEPNNKK
CCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MIGFISEKLLIPILDFFYGLVPSYGLAIVALTVVIRIALFPLSAGSIRSARRMKIAQPVM
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
QKRQAEIKSKFSGDPKKQQEELGKLMNEFGSPLAGCLPLIVQMPVLFALFATLRGSPFAD
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
VPYNINLKVLPQEQIAAIDPKPYKSPRHSIFVTEKSHFPVVATLPNGTKLGSEESVKINL
CCEECEEEEECHHHHHCCCCCCCCCCCCEEEEEECCCCCEEEECCCCCCCCCCCEEEEEE
QTTNGNSYSEVLSKYDNGSKFLPTWTVSKGSENIKVSQDGLVTAIKPGDATIEAKIPGLA
EECCCCCHHHHHHHCCCCCEECEEEEECCCCCCEEEECCCCEEEECCCCCEEEEECCCCC
AKSGFLFIKALGQVGFYVDGSINWDIATLVGAFGLTLLLSQVLSSQGMPSNAQQSTANKI
CCCCHHHEEEHHCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCC
TPVMITGMFLFFPLPAGVLLYMVVANIFQAFQTFLLNKEALPSNLQKILDEQLINKNKVI
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCC
PSTANVSDKRLPFEPNNKK
CCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12917642 [H]