| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
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The map label for this gene is 123966587
Identifier: 123966587
GI number: 123966587
Start: 1187942
End: 1188490
Strand: Direct
Name: 123966587
Synonym: P9515_13541
Alternate gene names: NA
Gene position: 1187942-1188490 (Clockwise)
Preceding gene: 123966586
Following gene: 123966588
Centisome position: 69.71
GC content: 30.78
Gene sequence:
>549_bases ATGAAGAATAAATTCAAAATTTTTAAATTTTTACTACTCACTCCATTCTTTATTTCAATTCCATTTTTGAATAACAGTAA AGTTAATGCAGGATTGGAGTTTCAATGGGATCAAGATTCAGGTTATAGAAGATTAAAATGGCTTCAAAAAGATGGCGAAA GTAGAGCAAGGAATACAATATTTTTCTTTTTAAGACCCACTGATAGAAGAGCGGATCTTTTAAAAATAACCATGACAATA CCTAAAAGATTTAAATCAACCATTAAAGAAGAAAAAATAAGTCTTTGCAAAGTAAAAATAGGTGGCTACGATACTCGTAC CAAATGTATTACTGAAATACCAGCAGATTTCGAACTTAAAGAAGACAATACTTCACTAGATATTTTTCCGTACAATCCAA TACCTAGTAATAAGGACAGTTACGCAATAGTATTTAAAGTATTTAATCCCAAAAGGACTGGTCTTTACCAATTTCATTCT TATGGGCAGTATTTTGGGAAGGATACCGTTTCAAGTTATTTAGGGAGCTCAACTATAGTGATCGATTAA
Upstream 100 bases:
>100_bases AGGAGCTTCGAATTTGAGGACAGATAGATGTTAATCTTTTTAAAAAGTTTTAATGTAAACTTTAAGCAATAAAAAAACAA CCCTTTACCCCCGAAAGACA
Downstream 100 bases:
>100_bases ATGATAAATTGTTAAAGAGCACAAAAAAATAATGACTAAAAGAACATTTGGTGGAACATCAAGAAAAAGAAAGCGTGTAT CTGGCTTTAGAGTAAGAATG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 182; Mature: 182
Protein sequence:
>182_residues MKNKFKIFKFLLLTPFFISIPFLNNSKVNAGLEFQWDQDSGYRRLKWLQKDGESRARNTIFFFLRPTDRRADLLKITMTI PKRFKSTIKEEKISLCKVKIGGYDTRTKCITEIPADFELKEDNTSLDIFPYNPIPSNKDSYAIVFKVFNPKRTGLYQFHS YGQYFGKDTVSSYLGSSTIVID
Sequences:
>Translated_182_residues MKNKFKIFKFLLLTPFFISIPFLNNSKVNAGLEFQWDQDSGYRRLKWLQKDGESRARNTIFFFLRPTDRRADLLKITMTI PKRFKSTIKEEKISLCKVKIGGYDTRTKCITEIPADFELKEDNTSLDIFPYNPIPSNKDSYAIVFKVFNPKRTGLYQFHS YGQYFGKDTVSSYLGSSTIVID >Mature_182_residues MKNKFKIFKFLLLTPFFISIPFLNNSKVNAGLEFQWDQDSGYRRLKWLQKDGESRARNTIFFFLRPTDRRADLLKITMTI PKRFKSTIKEEKISLCKVKIGGYDTRTKCITEIPADFELKEDNTSLDIFPYNPIPSNKDSYAIVFKVFNPKRTGLYQFHS YGQYFGKDTVSSYLGSSTIVID
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21261; Mature: 21261
Theoretical pI: Translated: 10.16; Mature: 10.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNKFKIFKFLLLTPFFISIPFLNNSKVNAGLEFQWDQDSGYRRLKWLQKDGESRARNTI CCCHHHHHHHHHHHHHHEEECCCCCCCCCCCEEEEECCCCCHHHHHHHHHCCCCCCCEEE FFFLRPTDRRADLLKITMTIPKRFKSTIKEEKISLCKVKIGGYDTRTKCITEIPADFELK EEEECCCCCCCEEEEEEEECCHHHHHHHHHHCEEEEEEEECCCCCCCHHEEECCCCEEEE EDNTSLDIFPYNPIPSNKDSYAIVFKVFNPKRTGLYQFHSYGQYFGKDTVSSYLGSSTIV CCCCEEEEEECCCCCCCCCCEEEEEEEECCCCCCCEEHHHHHHHCCHHHHHHHHCCEEEE ID EC >Mature Secondary Structure MKNKFKIFKFLLLTPFFISIPFLNNSKVNAGLEFQWDQDSGYRRLKWLQKDGESRARNTI CCCHHHHHHHHHHHHHHEEECCCCCCCCCCCEEEEECCCCCHHHHHHHHHCCCCCCCEEE FFFLRPTDRRADLLKITMTIPKRFKSTIKEEKISLCKVKIGGYDTRTKCITEIPADFELK EEEECCCCCCCEEEEEEEECCHHHHHHHHHHCEEEEEEEECCCCCCCHHEEECCCCEEEE EDNTSLDIFPYNPIPSNKDSYAIVFKVFNPKRTGLYQFHSYGQYFGKDTVSSYLGSSTIV CCCCEEEEEECCCCCCCCCCEEEEEEEECCCCCCCEEHHHHHHHCCHHHHHHHHCCEEEE ID EC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA