| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
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The map label for this gene is piuC [C]
Identifier: 123966565
GI number: 123966565
Start: 1171915
End: 1172484
Strand: Direct
Name: piuC [C]
Synonym: P9515_13321
Alternate gene names: 123966565
Gene position: 1171915-1172484 (Clockwise)
Preceding gene: 123966561
Following gene: 123966566
Centisome position: 68.77
GC content: 32.28
Gene sequence:
>570_bases ATGACCGCCGGTAGTCAGGCATCAAAAGTCAAAGAAAATTTGCAATTAAATAGGAATTCTGAAATTTCAAAAAAATATTC TCAATTAATCAGAAAAAAAATCATCACTAACCCATTAATTAAAAGTTTTGCTTTACCAAAGACAATCCATGGAATCATGT TTACAAAATCATTACAAAACATGCATTATGGAAGACACATTGACAATCCTTTTATGTCCTCAGGCAGGTCGGATTTATCT TTTACAATTTCATTAACTAACAAAGCCGATTACCAGGGTGGTGAATTAGTAATCGAAACACTAAATTCAGAAAAAAAATT AAAGCTAGATGCTGGAGAGATAATAATCTATCCAAGCACATACCTGCATTCCGTAAAAAAAGTTAAAAATGGTGAAAGAT TAGTATGCGTAGGCTGGATTGAAAGTTATGTTAAGTCAATTGAGGAAAGAGAATATTTATTTGACCTTGATGCTGGAGCG AAGGGTTTATTAGCCAAATATGGGAGGTCCGACGAACTTGACAATATTTTTAAGTCTTATTCAAACTTATTGAGATTACT AGGTAACTAA
Upstream 100 bases:
>100_bases CAAAATGAATTTTTTAACTTATAAGCTACTAAATTTAGAAGAATTAAAGATATTAAAACTAAATTTAAATAAGCAAAATG AACTTTGGGAAAGTGGCAAA
Downstream 100 bases:
>100_bases AGAAACATTTTATACATCTCGTAGAAAAAAGCTCTCAATATCTGTACTATATAAATAGTACGGATATTTTACCTTAAATG CCCAAAAGAAGTTCAATAGC
Product: putative hydroxylase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 189; Mature: 188
Protein sequence:
>189_residues MTAGSQASKVKENLQLNRNSEISKKYSQLIRKKIITNPLIKSFALPKTIHGIMFTKSLQNMHYGRHIDNPFMSSGRSDLS FTISLTNKADYQGGELVIETLNSEKKLKLDAGEIIIYPSTYLHSVKKVKNGERLVCVGWIESYVKSIEEREYLFDLDAGA KGLLAKYGRSDELDNIFKSYSNLLRLLGN
Sequences:
>Translated_189_residues MTAGSQASKVKENLQLNRNSEISKKYSQLIRKKIITNPLIKSFALPKTIHGIMFTKSLQNMHYGRHIDNPFMSSGRSDLS FTISLTNKADYQGGELVIETLNSEKKLKLDAGEIIIYPSTYLHSVKKVKNGERLVCVGWIESYVKSIEEREYLFDLDAGA KGLLAKYGRSDELDNIFKSYSNLLRLLGN >Mature_188_residues TAGSQASKVKENLQLNRNSEISKKYSQLIRKKIITNPLIKSFALPKTIHGIMFTKSLQNMHYGRHIDNPFMSSGRSDLSF TISLTNKADYQGGELVIETLNSEKKLKLDAGEIIIYPSTYLHSVKKVKNGERLVCVGWIESYVKSIEEREYLFDLDAGAK GLLAKYGRSDELDNIFKSYSNLLRLLGN
Specific function: Unknown
COG id: COG3128
COG function: function code S; Uncharacterized iron-regulated protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 Fe2OG dioxygenase domain
Homologues:
Organism=Escherichia coli, GI87081784, Length=190, Percent_Identity=33.1578947368421, Blast_Score=120, Evalue=5e-29,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1332_PROM5 (A2BXM8)
Other databases:
- EMBL: CP000552 - RefSeq: YP_001011646.1 - STRING: A2BXM8 - GeneID: 4718853 - GenomeReviews: CP000552_GR - KEGG: pmc:P9515_13321 - eggNOG: COG3128 - HOGENOM: HBG285605 - ProtClustDB: PRK05467 - HAMAP: MF_00657 - InterPro: IPR006620 - SMART: SM00702
Pfam domain/function: NA
EC number: 1.14.11.- [C]
Molecular weight: Translated: 21382; Mature: 21251
Theoretical pI: Translated: 9.94; Mature: 9.94
Prosite motif: PS51471 FE2OG_OXY
Important sites: BINDING 165-165
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAGSQASKVKENLQLNRNSEISKKYSQLIRKKIITNPLIKSFALPKTIHGIMFTKSLQN CCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH MHYGRHIDNPFMSSGRSDLSFTISLTNKADYQGGELVIETLNSEKKLKLDAGEIIIYPST HHCCCCCCCHHHHCCCCCEEEEEEECCCCCCCCCCEEEEECCCCCEEEECCCCEEEECHH YLHSVKKVKNGERLVCVGWIESYVKSIEEREYLFDLDAGAKGLLAKYGRSDELDNIFKSY HHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHEEECCCCCHHHHHHCCCCCCHHHHHHHH SNLLRLLGN HHHHHHHCC >Mature Secondary Structure TAGSQASKVKENLQLNRNSEISKKYSQLIRKKIITNPLIKSFALPKTIHGIMFTKSLQN CCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH MHYGRHIDNPFMSSGRSDLSFTISLTNKADYQGGELVIETLNSEKKLKLDAGEIIIYPST HHCCCCCCCHHHHCCCCCEEEEEEECCCCCCCCCCEEEEECCCCCEEEECCCCEEEECHH YLHSVKKVKNGERLVCVGWIESYVKSIEEREYLFDLDAGAKGLLAKYGRSDELDNIFKSY HHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHEEECCCCCHHHHHHCCCCCCHHHHHHHH SNLLRLLGN HHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA