| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
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The map label for this gene is 123966562
Identifier: 123966562
GI number: 123966562
Start: 1167146
End: 1168114
Strand: Reverse
Name: 123966562
Synonym: P9515_13291
Alternate gene names: NA
Gene position: 1168114-1167146 (Counterclockwise)
Preceding gene: 123966563
Following gene: 123966559
Centisome position: 68.54
GC content: 27.24
Gene sequence:
>969_bases ATGAGGTTATTTTTTTTTATCTTTATATTTACTCAATTATTAAATTCTTTGGTTGTTTTTGCAGAAAAAGATAAAAAAGA GTCTCGCGAAATAAATTCAATTAGATGGGAGAAAGTTCAAGAAAAAAATTCAAATAATCTAGAAAAGATTATTTGGAAAT CATATAAGGATGATGAAAGTTATTTTCAAAATGAAATTGACTTAAAACCTAATATAGAAAACCTTAATGATTATAGAAAT AAAGGTAAAGATAAGGATAAAGATATATTCACGCAGTCTCTCAATAAAAGAAATAGATTACTTAATTTTGGTGGAATCAC GGTCAGCAATGCTTTGATACCTAATGAGGGGACTTCACAAATAAATTTGAATTATGACTCAAAAGGTAATTTGTTTGGAT TTTATGGTTATTCTTTATCAAATATATTTCAATTAGAACTAAGTGCTGGATCTTTTGATGGTGTGAGTTTAGTTGATAAT AAACATTCAAGTCTGCAAAGGACATTTTTGAGCAAGAACAATTTTAATTATAGAGTAGGAGGTAAATTATTAATTCTTAG TCCACAAAATTTTGATCCTTTTTGGATGACATTTAGAACATCCTTTGGAAGTAATGAAAAGACTAATCAAGGTTACCTAA TCACTGAATTAATAAATACTATAAGAATTAATGATAAGGTTGTTTTTAATATTAGTCCAAAATACTTTTTTAGTGAGATA GAAACTTTTGGGGCGGTTGGTATCTCAAGTTATATTAATTTATTAGATAATTTGCAGCTTATTCCTGAAATAAATACTTC ATTGAAAAATGAACAAGATTTCAGCTCCTCATTAGGATTAAGATATTCTTTCCGACCAGGAAAATCAATTGATTTATATT ATTCCAATGCAGCAGGTGTTCAGGATATTGGACAGCTTCTTGAGGATAAAGTATATCGATTTGGCATTAAGTTGAATTTT ATATTTTAG
Upstream 100 bases:
>100_bases CGAGTGCCTACGGCTATTTGATTTCTAAGTTGAATTGATAGATATAGTTTATAAGGAGTATTATTAAAGGGTTAAATTGA TAAGTCGAAGATTTTTCTAA
Downstream 100 bases:
>100_bases ATAATCTAGTTTCACCAGAATGGGTCAGTAGTAAATGAAACTTTTAATGTAGATTCTTTATTCTTTTTTATACTACTTAT ACAAGGCCTCACTGTTCCCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 322; Mature: 322
Protein sequence:
>322_residues MRLFFFIFIFTQLLNSLVVFAEKDKKESREINSIRWEKVQEKNSNNLEKIIWKSYKDDESYFQNEIDLKPNIENLNDYRN KGKDKDKDIFTQSLNKRNRLLNFGGITVSNALIPNEGTSQINLNYDSKGNLFGFYGYSLSNIFQLELSAGSFDGVSLVDN KHSSLQRTFLSKNNFNYRVGGKLLILSPQNFDPFWMTFRTSFGSNEKTNQGYLITELINTIRINDKVVFNISPKYFFSEI ETFGAVGISSYINLLDNLQLIPEINTSLKNEQDFSSSLGLRYSFRPGKSIDLYYSNAAGVQDIGQLLEDKVYRFGIKLNF IF
Sequences:
>Translated_322_residues MRLFFFIFIFTQLLNSLVVFAEKDKKESREINSIRWEKVQEKNSNNLEKIIWKSYKDDESYFQNEIDLKPNIENLNDYRN KGKDKDKDIFTQSLNKRNRLLNFGGITVSNALIPNEGTSQINLNYDSKGNLFGFYGYSLSNIFQLELSAGSFDGVSLVDN KHSSLQRTFLSKNNFNYRVGGKLLILSPQNFDPFWMTFRTSFGSNEKTNQGYLITELINTIRINDKVVFNISPKYFFSEI ETFGAVGISSYINLLDNLQLIPEINTSLKNEQDFSSSLGLRYSFRPGKSIDLYYSNAAGVQDIGQLLEDKVYRFGIKLNF IF >Mature_322_residues MRLFFFIFIFTQLLNSLVVFAEKDKKESREINSIRWEKVQEKNSNNLEKIIWKSYKDDESYFQNEIDLKPNIENLNDYRN KGKDKDKDIFTQSLNKRNRLLNFGGITVSNALIPNEGTSQINLNYDSKGNLFGFYGYSLSNIFQLELSAGSFDGVSLVDN KHSSLQRTFLSKNNFNYRVGGKLLILSPQNFDPFWMTFRTSFGSNEKTNQGYLITELINTIRINDKVVFNISPKYFFSEI ETFGAVGISSYINLLDNLQLIPEINTSLKNEQDFSSSLGLRYSFRPGKSIDLYYSNAAGVQDIGQLLEDKVYRFGIKLNF IF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37238; Mature: 37238
Theoretical pI: Translated: 8.96; Mature: 8.96
Prosite motif: PS00430 TONB_DEPENDENT_REC_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 0.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLFFFIFIFTQLLNSLVVFAEKDKKESREINSIRWEKVQEKNSNNLEKIIWKSYKDDES CHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCHH YFQNEIDLKPNIENLNDYRNKGKDKDKDIFTQSLNKRNRLLNFGGITVSNALIPNEGTSQ HHHCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHCEEEECCEEEECEECCCCCCCE INLNYDSKGNLFGFYGYSLSNIFQLELSAGSFDGVSLVDNKHSSLQRTFLSKNNFNYRVG EEEEECCCCCEEEEECCCCCEEEEEEECCCCCCCEEEECCCHHHHHHHHHCCCCCCEEEC GKLLILSPQNFDPFWMTFRTSFGSNEKTNQGYLITELINTIRINDKVVFNISPKYFFSEI CEEEEECCCCCCCEEEEEEECCCCCCCCCCCEEHHHHHHHEECCCEEEEEECHHHHHHHH ETFGAVGISSYINLLDNLQLIPEINTSLKNEQDFSSSLGLRYSFRPGKSIDLYYSNAAGV HHHHHHHHHHHHHHHHCCEECCCCCCCCCCCCCHHHCCCEEEEECCCCEEEEEECCCCCH QDIGQLLEDKVYRFGIKLNFIF HHHHHHHHHHHHHEEEEEEEEC >Mature Secondary Structure MRLFFFIFIFTQLLNSLVVFAEKDKKESREINSIRWEKVQEKNSNNLEKIIWKSYKDDES CHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCHH YFQNEIDLKPNIENLNDYRNKGKDKDKDIFTQSLNKRNRLLNFGGITVSNALIPNEGTSQ HHHCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHCEEEECCEEEECEECCCCCCCE INLNYDSKGNLFGFYGYSLSNIFQLELSAGSFDGVSLVDNKHSSLQRTFLSKNNFNYRVG EEEEECCCCCEEEEECCCCCEEEEEEECCCCCCCEEEECCCHHHHHHHHHCCCCCCEEEC GKLLILSPQNFDPFWMTFRTSFGSNEKTNQGYLITELINTIRINDKVVFNISPKYFFSEI CEEEEECCCCCCCEEEEEEECCCCCCCCCCCEEHHHHHHHEECCCEEEEEECHHHHHHHH ETFGAVGISSYINLLDNLQLIPEINTSLKNEQDFSSSLGLRYSFRPGKSIDLYYSNAAGV HHHHHHHHHHHHHHHHCCEECCCCCCCCCCCCCHHHCCCEEEEECCCCEEEEEECCCCCH QDIGQLLEDKVYRFGIKLNFIF HHHHHHHHHHHHHEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA