| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
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The map label for this gene is 123966561
Identifier: 123966561
GI number: 123966561
Start: 1166889
End: 1167134
Strand: Direct
Name: 123966561
Synonym: P9515_13281
Alternate gene names: NA
Gene position: 1166889-1167134 (Clockwise)
Preceding gene: 123966560
Following gene: 123966565
Centisome position: 68.47
GC content: 36.59
Gene sequence:
>246_bases TTGACAAACTCTAAAATTAAAATCACTTGGCCAAATAATATTGATACATATGCCTATGATGGAGACGATTGGTTTCTAAT TGCTGAAAAGGTAGGTTTGGAAATCCCGACTGGCTGTCTAACAGGGAGTTGTGGTGCCTGTGAAATAGATGTCAATGGGG GAACAGTGAGGCCTTGTATAAGTAGTATAAAAAAGAATAAAGAATCTACATTAAAAGTTTCATTTACTACTGACCCATTC TGGTGA
Upstream 100 bases:
>100_bases TAGACAAGAAATCAAGATCATATAAAATGAAACGAGAATCTATTATTAACAATTTAGCGAACGAATTTAATAATCATTTC AATATTTCATTGCTATTAAA
Downstream 100 bases:
>100_bases AACTAGATTATCTAAAATATAAAATTCAACTTAATGCCAAATCGATATACTTTATCCTCAAGAAGCTGTCCAATATCCTG AACACCTGCTGCATTGGAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 81; Mature: 80
Protein sequence:
>81_residues MTNSKIKITWPNNIDTYAYDGDDWFLIAEKVGLEIPTGCLTGSCGACEIDVNGGTVRPCISSIKKNKESTLKVSFTTDPF W
Sequences:
>Translated_81_residues MTNSKIKITWPNNIDTYAYDGDDWFLIAEKVGLEIPTGCLTGSCGACEIDVNGGTVRPCISSIKKNKESTLKVSFTTDPF W >Mature_80_residues TNSKIKITWPNNIDTYAYDGDDWFLIAEKVGLEIPTGCLTGSCGACEIDVNGGTVRPCISSIKKNKESTLKVSFTTDPFW
Specific function: Unknown
COG id: COG0633
COG function: function code C; Ferredoxin
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8907; Mature: 8776
Theoretical pI: Translated: 4.61; Mature: 4.61
Prosite motif: PS00197 2FE2S_FER_1 ; PS51085 2FE2S_FER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.9 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 5.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNSKIKITWPNNIDTYAYDGDDWFLIAEKVGLEIPTGCLTGSCGACEIDVNGGTVRPCI CCCCEEEEECCCCCCCEEECCCCEEEEEECCCCCCCCCEECCCCCEEEEECCCCCCHHHH SSIKKNKESTLKVSFTTDPFW HHHHCCCCCEEEEEEECCCCC >Mature Secondary Structure TNSKIKITWPNNIDTYAYDGDDWFLIAEKVGLEIPTGCLTGSCGACEIDVNGGTVRPCI CCCEEEEECCCCCCCEEECCCCEEEEEECCCCCCCCCEECCCCCEEEEECCCCCCHHHH SSIKKNKESTLKVSFTTDPFW HHHHCCCCCEEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA