Definition Prochlorococcus marinus str. MIT 9515, complete genome.
Accession NC_008817
Length 1,704,176

Click here to switch to the map view.

The map label for this gene is 123966522

Identifier: 123966522

GI number: 123966522

Start: 1133607

End: 1133768

Strand: Reverse

Name: 123966522

Synonym: P9515_12891

Alternate gene names: NA

Gene position: 1133768-1133607 (Counterclockwise)

Preceding gene: 123966523

Following gene: 123966519

Centisome position: 66.53

GC content: 26.54

Gene sequence:

>162_bases
ATGTCGCCTGGAACTCCTGATTTGATAATTTTAATATTTGTTTTTTTTGGTCTCCAAGCTTGGTGGGTTATTCCATTAAT
TAATAAAAATAATAAATTGAATGAGAAAGGCAAAGTATTAAGGGAGGAAATAAAAAAATTAGAAAAACTTTATAAAAAGT
AG

Upstream 100 bases:

>100_bases
TTGACTTGGAAGCTGCTTAGACTTATAAAGTTTGTTTGTTAAAAGTAATAATCGACTTTTATTGTGGATTAACTCATTAA
ACAAATCATTTAAGATATTT

Downstream 100 bases:

>100_bases
AAGATTTTGTGTGCCTTTAATAACTTCACTTATTTTGTAAATGTTTAACTTTTATAAAAAATTACTCACTTTAGCGTCAT
TATAGTTGTTTTCCTCTTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 53; Mature: 52

Protein sequence:

>53_residues
MSPGTPDLIILIFVFFGLQAWWVIPLINKNNKLNEKGKVLREEIKKLEKLYKK

Sequences:

>Translated_53_residues
MSPGTPDLIILIFVFFGLQAWWVIPLINKNNKLNEKGKVLREEIKKLEKLYKK
>Mature_52_residues
SPGTPDLIILIFVFFGLQAWWVIPLINKNNKLNEKGKVLREEIKKLEKLYKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 6256; Mature: 6124

Theoretical pI: Translated: 10.55; Mature: 10.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPGTPDLIILIFVFFGLQAWWVIPLINKNNKLNEKGKVLREEIKKLEKLYKK
CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SPGTPDLIILIFVFFGLQAWWVIPLINKNNKLNEKGKVLREEIKKLEKLYKK
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA