| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
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The map label for this gene is 123966511
Identifier: 123966511
GI number: 123966511
Start: 1121468
End: 1122448
Strand: Direct
Name: 123966511
Synonym: P9515_12781
Alternate gene names: NA
Gene position: 1121468-1122448 (Clockwise)
Preceding gene: 123966510
Following gene: 123966512
Centisome position: 65.81
GC content: 29.36
Gene sequence:
>981_bases ATGGTTTTAAACTTTTGCAAGAAAATAATCTTAAAGTTCATACCATTAAAAGTTGTTGATAAATTCTTTTACTACCAATT ATTGATTATTGCCCCATTTATAAAACTATATACTAAATATACCGGAGCAAGTTTACCAAAATCTAGAGAACTTTTAAAAA AAGTAGGCGTATACCCTCTTTTAGATCATTATTATCAGCCATTATTTAATGATGCCAGATTAAAAAAATCTTTAAGAGAA CCAAGACATCTTCCAGGAATTAATTTAAATCATAATGAACAAATTGTTTTAATAAAAGAACTAATTTATAGCAAAGAGCT TTTAGATCTAAATCTTACTAAATTTCCTGAATCAATTTACGATTTTGATATTAGAGGAGCTTTTAAATTTGGAGATGCAG AATTTCTTTACCAGATTATAAGACTTTTAAAACCAAAGAAATTTGTTGAAATCGGATCAGGCAGCTCAACAAAAATTGCT TACCAAGCCTTGATGAAAAATAAAGATGAAAGCAATATTAAATGTGAACATCTATGTATAGAGCCCTATGAAATGCCATG GTTAGAAGATCTTGGAGTAAAAGTAATTAGAAAACTTGCAGAGGATTGTGATACAAGTATTTTTTCCAGTCTTGAAGAAA ATGATATTCTTTTTATTGACTCTTCACATATAATCAGGCCACAAGGGGATGTGCTTAAGGAATATCTTGAAATAATTCCA ACTTTAAAAAAAGGAGTATATGTGCACGTTCATGATATTTTCACACCAAGAGATTACTTAGACGAATGGATAAGAGAGGA AGTACATTTTTGGAATGAGCAATACCTTCTAGAGGCCTTGTTGTCAGATTCAAATAAATATGAAGTAGTTGCAGCACTAA ATCACCTTTACCACAATAACTTTAATGAACTAAAAATAGTTTGTCCATACATTACAGAAGGATTGGAACCCGGTTCATTT TATTTTAAAATTAAAGCTTAA
Upstream 100 bases:
>100_bases ATAATAGAATATTTCTAGACTTTCATTATAATTATCAAACACGTCTTGACTTGGTATTATGTTACTTAATATCAAAATGA ACTAAAATTAGACTTTTATA
Downstream 100 bases:
>100_bases ATGTTTAAGATTGCATTCATCAAAGAGGCCTGTTATCAGGATCTATGGATTGGTGACAATAAAGATACCTCTTCTGATCT TATAAGGTCAACTTTGTTTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 326; Mature: 326
Protein sequence:
>326_residues MVLNFCKKIILKFIPLKVVDKFFYYQLLIIAPFIKLYTKYTGASLPKSRELLKKVGVYPLLDHYYQPLFNDARLKKSLRE PRHLPGINLNHNEQIVLIKELIYSKELLDLNLTKFPESIYDFDIRGAFKFGDAEFLYQIIRLLKPKKFVEIGSGSSTKIA YQALMKNKDESNIKCEHLCIEPYEMPWLEDLGVKVIRKLAEDCDTSIFSSLEENDILFIDSSHIIRPQGDVLKEYLEIIP TLKKGVYVHVHDIFTPRDYLDEWIREEVHFWNEQYLLEALLSDSNKYEVVAALNHLYHNNFNELKIVCPYITEGLEPGSF YFKIKA
Sequences:
>Translated_326_residues MVLNFCKKIILKFIPLKVVDKFFYYQLLIIAPFIKLYTKYTGASLPKSRELLKKVGVYPLLDHYYQPLFNDARLKKSLRE PRHLPGINLNHNEQIVLIKELIYSKELLDLNLTKFPESIYDFDIRGAFKFGDAEFLYQIIRLLKPKKFVEIGSGSSTKIA YQALMKNKDESNIKCEHLCIEPYEMPWLEDLGVKVIRKLAEDCDTSIFSSLEENDILFIDSSHIIRPQGDVLKEYLEIIP TLKKGVYVHVHDIFTPRDYLDEWIREEVHFWNEQYLLEALLSDSNKYEVVAALNHLYHNNFNELKIVCPYITEGLEPGSF YFKIKA >Mature_326_residues MVLNFCKKIILKFIPLKVVDKFFYYQLLIIAPFIKLYTKYTGASLPKSRELLKKVGVYPLLDHYYQPLFNDARLKKSLRE PRHLPGINLNHNEQIVLIKELIYSKELLDLNLTKFPESIYDFDIRGAFKFGDAEFLYQIIRLLKPKKFVEIGSGSSTKIA YQALMKNKDESNIKCEHLCIEPYEMPWLEDLGVKVIRKLAEDCDTSIFSSLEENDILFIDSSHIIRPQGDVLKEYLEIIP TLKKGVYVHVHDIFTPRDYLDEWIREEVHFWNEQYLLEALLSDSNKYEVVAALNHLYHNNFNELKIVCPYITEGLEPGSF YFKIKA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38300; Mature: 38300
Theoretical pI: Translated: 6.85; Mature: 6.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVLNFCKKIILKFIPLKVVDKFFYYQLLIIAPFIKLYTKYTGASLPKSRELLKKVGVYPL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHH LDHYYQPLFNDARLKKSLREPRHLPGINLNHNEQIVLIKELIYSKELLDLNLTKFPESIY HHHHHHHHHCHHHHHHHHCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHCCCHHHCCHHHH DFDIRGAFKFGDAEFLYQIIRLLKPKKFVEIGSGSSTKIAYQALMKNKDESNIKCEHLCI CCCCCCEEECCCHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHCCCCCCCCEEEEEEC EPYEMPWLEDLGVKVIRKLAEDCDTSIFSSLEENDILFIDSSHIIRPQGDVLKEYLEIIP CCCCCCCHHHHHHHHHHHHHHHHCHHHHHCCCCCCEEEECCCCEECCCHHHHHHHHHHHH TLKKGVYVHVHDIFTPRDYLDEWIREEVHFWNEQYLLEALLSDSNKYEVVAALNHLYHNN HHHCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCC FNELKIVCPYITEGLEPGSFYFKIKA CCCEEEECHHHHCCCCCCCEEEEEEC >Mature Secondary Structure MVLNFCKKIILKFIPLKVVDKFFYYQLLIIAPFIKLYTKYTGASLPKSRELLKKVGVYPL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHH LDHYYQPLFNDARLKKSLREPRHLPGINLNHNEQIVLIKELIYSKELLDLNLTKFPESIY HHHHHHHHHCHHHHHHHHCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHCCCHHHCCHHHH DFDIRGAFKFGDAEFLYQIIRLLKPKKFVEIGSGSSTKIAYQALMKNKDESNIKCEHLCI CCCCCCEEECCCHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHCCCCCCCCEEEEEEC EPYEMPWLEDLGVKVIRKLAEDCDTSIFSSLEENDILFIDSSHIIRPQGDVLKEYLEIIP CCCCCCCHHHHHHHHHHHHHHHHCHHHHHCCCCCCEEEECCCCEECCCHHHHHHHHHHHH TLKKGVYVHVHDIFTPRDYLDEWIREEVHFWNEQYLLEALLSDSNKYEVVAALNHLYHNN HHHCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCC FNELKIVCPYITEGLEPGSFYFKIKA CCCEEEECHHHHCCCCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA