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The map label for this gene is rpmJ

Identifier: 123966459

GI number: 123966459

Start: 1083860

End: 1083976

Strand: Reverse

Name: rpmJ

Synonym: P9515_12261

Alternate gene names: 123966459

Gene position: 1083976-1083860 (Counterclockwise)

Preceding gene: 123966462

Following gene: 123966458

Centisome position: 63.61

GC content: 37.61

Gene sequence:

>117_bases
ATGAAAGTAAGATCCTCTATCAAAAAAATCGATCAAGATGATCAAATAGTAAAAAGGAGGGGCAGGCTATATGTAATCAA
TAAGAAAAAGCCCAGAAACAAGCAGCGGCAAGGCTGA

Upstream 100 bases:

>100_bases
CAGGAAAATTTTAAGTTCATAAATTCATTAAGTTTGACAAATAGAAATGATAATCATTTCTATAATATATATAATTGATC
TAAATGTCAGTTTTTAAATT

Downstream 100 bases:

>100_bases
TTTCCTTACATCTTCACTCGTAATTTATGGGATTTTCATTGCTGGTCTTTACTGGGATATTTGAACTAGTATTCACATCA
TTTTTAATGTTTATTTTTTC

Product: 50S ribosomal protein L36

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 38; Mature: 38

Protein sequence:

>38_residues
MKVRSSIKKIDQDDQIVKRRGRLYVINKKKPRNKQRQG

Sequences:

>Translated_38_residues
MKVRSSIKKIDQDDQIVKRRGRLYVINKKKPRNKQRQG
>Mature_38_residues
MKVRSSIKKIDQDDQIVKRRGRLYVINKKKPRNKQRQG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L36P family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RL361_PROM5 (A2BXC2)

Other databases:

- EMBL:   CP000552
- RefSeq:   YP_001011540.1
- ProteinModelPortal:   A2BXC2
- SMR:   A2BXC2
- STRING:   A2BXC2
- GeneID:   4718918
- GenomeReviews:   CP000552_GR
- KEGG:   pmc:P9515_12261
- eggNOG:   NOG129164
- HOGENOM:   HBG734088
- ProtClustDB:   PRK00831
- BioCyc:   PMAR167542:P9515ORF_1280-MONOMER
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_00251
- InterPro:   IPR000473
- PANTHER:   PTHR18804
- TIGRFAMs:   TIGR01022

Pfam domain/function: PF00444 Ribosomal_L36; SSF57840 Ribosomal_L36

EC number: NA

Molecular weight: Translated: 4610; Mature: 4610

Theoretical pI: Translated: 12.01; Mature: 12.01

Prosite motif: PS00828 RIBOSOMAL_L36

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVRSSIKKIDQDDQIVKRRGRLYVINKKKPRNKQRQG
CCCCHHHHHCCCCHHHHHHCCCEEEEECCCCCCCCCCC
>Mature Secondary Structure
MKVRSSIKKIDQDDQIVKRRGRLYVINKKKPRNKQRQG
CCCCHHHHHCCCCHHHHHHCCCEEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA