| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
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The map label for this gene is 123966454
Identifier: 123966454
GI number: 123966454
Start: 1081244
End: 1082128
Strand: Direct
Name: 123966454
Synonym: P9515_12211
Alternate gene names: NA
Gene position: 1081244-1082128 (Clockwise)
Preceding gene: 123966453
Following gene: 123966460
Centisome position: 63.45
GC content: 31.86
Gene sequence:
>885_bases ATGAAAAAAAATTTAAATTGTGATTTTGCAAAAGAACGAAGTAATGAGGCTCAAGTCGTCGCTAGTAATTTAGAAGCAAT TTTAAAATCTAACTCTTATAAACTTGCGCATGAAGATTTGGAATTACTAAATACTGATGAAATGCGAGGCGTTCGAATGC TTCTTGAAATAACGAAGCCTGATCAAGCGATTGAAAAGGAAAATATAATTTCTACGGTTATTATTTTTGGTGGCGTTCAT ATATCAGAAGAAATCACTTCAAAGAGAAGATTGGACGAGACTTCAAAACTTCTTGAAAAAGATCCAAAATCTACTTTGTT AATGCAAAAAGTAAAAAGATATAAGAATCTATATTCAATGTCTCACTATTATTCTTCAGCTAGGGAATTATCTAAGTTAA TATCAATTGAAACAAAATTAGAACGTCCTCATGCTCATGTGATAGTAACTGGGGGTGGACCTGGGATTATGGAAGCTGCT AATAGAGGGGCTTTTGATGCGGGTTGTAAATCTATTGGATTAAATATTAGTTTACCTAATGAACAGCATCCAAATTCATT TATTACTCCGGGATTATGTTTTAAGTTTAACTATTTTGCTATGAGGAAATTTCATTTTGTTATGAGATCTGAGGCCGCAG TTTTTTTCCCCGGTGGATTCGGAACTTTAGATGAATTATTTGAATTATTAACTTTGAGGCAAACTGGGATGAAGAAAAAT ATACCAATTATTTTATTTGGAAGAGATTATTGGAACAAAGTAATTAATTTTGAATATCTATGCGATATGGGTTTAATAGA GGAAAAGCATTTATCAATTTTTAAATATGCTGACAGTGCTCATGAGGCTTGGGCTTTGATAAAGAAGTTTAACAATAGTG ATTGA
Upstream 100 bases:
>100_bases CATATTACCCTGTCACAAGGCGAAAGAAGTGATTTAGCTGAATTGGCCGCAAATATCTTGTGATTAAAAACTTAAAACAT TAAAAAAATGGAGGAATTTT
Downstream 100 bases:
>100_bases TTTTTAAGACATCATAATCTTTTAGCCCACGCAAAACTCACGCAAATCACAACTATTTAGTCCGAATTAGGCCACACTTA TTTCTCTGAAAGTACTGATA
Product: dehydrogenase
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 294; Mature: 294
Protein sequence:
>294_residues MKKNLNCDFAKERSNEAQVVASNLEAILKSNSYKLAHEDLELLNTDEMRGVRMLLEITKPDQAIEKENIISTVIIFGGVH ISEEITSKRRLDETSKLLEKDPKSTLLMQKVKRYKNLYSMSHYYSSARELSKLISIETKLERPHAHVIVTGGGPGIMEAA NRGAFDAGCKSIGLNISLPNEQHPNSFITPGLCFKFNYFAMRKFHFVMRSEAAVFFPGGFGTLDELFELLTLRQTGMKKN IPIILFGRDYWNKVINFEYLCDMGLIEEKHLSIFKYADSAHEAWALIKKFNNSD
Sequences:
>Translated_294_residues MKKNLNCDFAKERSNEAQVVASNLEAILKSNSYKLAHEDLELLNTDEMRGVRMLLEITKPDQAIEKENIISTVIIFGGVH ISEEITSKRRLDETSKLLEKDPKSTLLMQKVKRYKNLYSMSHYYSSARELSKLISIETKLERPHAHVIVTGGGPGIMEAA NRGAFDAGCKSIGLNISLPNEQHPNSFITPGLCFKFNYFAMRKFHFVMRSEAAVFFPGGFGTLDELFELLTLRQTGMKKN IPIILFGRDYWNKVINFEYLCDMGLIEEKHLSIFKYADSAHEAWALIKKFNNSD >Mature_294_residues MKKNLNCDFAKERSNEAQVVASNLEAILKSNSYKLAHEDLELLNTDEMRGVRMLLEITKPDQAIEKENIISTVIIFGGVH ISEEITSKRRLDETSKLLEKDPKSTLLMQKVKRYKNLYSMSHYYSSARELSKLISIETKLERPHAHVIVTGGGPGIMEAA NRGAFDAGCKSIGLNISLPNEQHPNSFITPGLCFKFNYFAMRKFHFVMRSEAAVFFPGGFGTLDELFELLTLRQTGMKKN IPIILFGRDYWNKVINFEYLCDMGLIEEKHLSIFKYADSAHEAWALIKKFNNSD
Specific function: Unknown
COG id: COG1611
COG function: function code R; Predicted Rossmann fold nucleotide-binding protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33511; Mature: 33511
Theoretical pI: Translated: 8.31; Mature: 8.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKNLNCDFAKERSNEAQVVASNLEAILKSNSYKLAHEDLELLNTDEMRGVRMLLEITKP CCCCCCCCHHHCCCCCHHHHHHHHHHHHHCCCCEEHHHHHHHHCCHHHHHHEEEEEECCC DQAIEKENIISTVIIFGGVHISEEITSKRRLDETSKLLEKDPKSTLLMQKVKRYKNLYSM HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH SHYYSSARELSKLISIETKLERPHAHVIVTGGGPGIMEAANRGAFDAGCKSIGLNISLPN HHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHCCCCCHHCHHHCCCEEECCC EQHPNSFITPGLCFKFNYFAMRKFHFVMRSEAAVFFPGGFGTLDELFELLTLRQTGMKKN CCCCCCCCCCCHHEEEHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHCCCCC IPIILFGRDYWNKVINFEYLCDMGLIEEKHLSIFKYADSAHEAWALIKKFNNSD CCEEEECCHHHHHHCCHHHHHCCCCCCHHHHHHHHHHCHHHHHHHHHHHHCCCC >Mature Secondary Structure MKKNLNCDFAKERSNEAQVVASNLEAILKSNSYKLAHEDLELLNTDEMRGVRMLLEITKP CCCCCCCCHHHCCCCCHHHHHHHHHHHHHCCCCEEHHHHHHHHCCHHHHHHEEEEEECCC DQAIEKENIISTVIIFGGVHISEEITSKRRLDETSKLLEKDPKSTLLMQKVKRYKNLYSM HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH SHYYSSARELSKLISIETKLERPHAHVIVTGGGPGIMEAANRGAFDAGCKSIGLNISLPN HHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHCCCCCHHCHHHCCCEEECCC EQHPNSFITPGLCFKFNYFAMRKFHFVMRSEAAVFFPGGFGTLDELFELLTLRQTGMKKN CCCCCCCCCCCHHEEEHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHCCCCC IPIILFGRDYWNKVINFEYLCDMGLIEEKHLSIFKYADSAHEAWALIKKFNNSD CCEEEECCHHHHHHCCHHHHHCCCCCCHHHHHHHHHHCHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA