| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
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The map label for this gene is ylaK [H]
Identifier: 123966453
GI number: 123966453
Start: 1079815
End: 1081206
Strand: Direct
Name: ylaK [H]
Synonym: P9515_12201
Alternate gene names: 123966453
Gene position: 1079815-1081206 (Clockwise)
Preceding gene: 123966449
Following gene: 123966454
Centisome position: 63.36
GC content: 32.69
Gene sequence:
>1392_bases ATGAAAAAAAGAGTCATAGTATTAGATACCAACGTTCTTTTACATGATCCGGAATCTCCACTTCATTTCACTAAAGATGA TGTTGTTATTCCAATTCAAGTAGTTGAAGAGGTCGATAGGTTTAAGCGTGATCCAAGTGAAAAAGGCAGGAATGCCCGAA GAGTTTCTAGATTATTGGATAGCTTTAGAGAGAGAGGGAATTTATCTTCTGGTGTGAGAATAAATAATAAAGATGCAGGT CAAATAAAAGTTGCTTTCTGTAGAAAAGAAACTACTGATAGGTTACCCTCTGAGTTAAATGACAATAGTGGAGATAACAA GATTTTAGCGGTTGCTCTTGAACACAAAACTAATAAGGTATTGGCAAATTCTCCAGATGTAATTCTCATCTCTAAAGATA CAAATTTAAGGATAAAGGCGGATGCAATTGGATTAAAAGCGGAAGACTACAGTAGCAATAAAATTTCTTTAGATAATTTA AATAGAGGATTTAGAGAGGTTATTTCTGATCAAAATGAAATTAATAAAATTCAAAAAGAAGGATTCATCTTTTTAAAAGA TATTAAATTCAATTTAAAGCCAAGCTTATATTCTAATGAAGGTGTAATTCTCAGGGATAATCTTAAAGAAAATCATACAT ATTTATGCAGATATGACCCTATAGAAAAGAAATTGATTTCTTTGAATTGGTTAAGAAGATCTAATTTAGGAAAAATAAAA CCAAAAAATTTAGAACAAAGTTTTGCCTTGGATTTGCTCCTTGATCCAGATATTCAGTTGGTTACTCTTATAGGAAAAGC AGGTACAGGAAAAACTTTATTGGCATTAGCTGTGGGATTAAATTTAGTTGCAGATGAAAATATGTATGAAAGATTATTAG TCTCAAGACCTCCAATTTCTTTGGGGAAAGAATTAGGATTTCTTCCAGGCAGTTTAGATGAAAAATTAGCTCCATGGATG AAACCTATTATTGATAACTTGGATTATTTAACAGGCTCAAAATTTAATAAAAAAGGTGAAAAAGTTGCACCTAAAGAGAG AGATAATAATGCAAGAAATTCATGGGAAGATCTCAAAGGGATGGGACTTTTAGAGGTTGAAGCAATCAATTATATTCGCG GAAGGTCAATTTCACATCAATTTATTCTTATTGATGAGGCTCAAAATTTAACGCCTTTAGAAGTTAAGACGATCGTTACT AGGGCTGGTGAAGGTACAAAAATTGTATTCACTGGGGATCCAAATCAAATAGATCATCCTTATTTAGACTCTGATAGTAA TGGTCTTACATGGTTGGCTAAAAAACTTCAGGGTCAGAAAATAGTTGGCCATATTACCCTGTCACAAGGCGAAAGAAGTG ATTTAGCTGAATTGGCCGCAAATATCTTGTGA
Upstream 100 bases:
>100_bases ATATTTAATATCATTACATAATACTAAAAATTATATTTCTATTCAGGAAATTAGGAAATCTAAGGTATAGTTTCTCCACC TTAATTAAGGAGGTTTAGTT
Downstream 100 bases:
>100_bases TTAAAAACTTAAAACATTAAAAAAATGGAGGAATTTTATGAAAAAAAATTTAAATTGTGATTTTGCAAAAGAACGAAGTA ATGAGGCTCAAGTCGTCGCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 463; Mature: 463
Protein sequence:
>463_residues MKKRVIVLDTNVLLHDPESPLHFTKDDVVIPIQVVEEVDRFKRDPSEKGRNARRVSRLLDSFRERGNLSSGVRINNKDAG QIKVAFCRKETTDRLPSELNDNSGDNKILAVALEHKTNKVLANSPDVILISKDTNLRIKADAIGLKAEDYSSNKISLDNL NRGFREVISDQNEINKIQKEGFIFLKDIKFNLKPSLYSNEGVILRDNLKENHTYLCRYDPIEKKLISLNWLRRSNLGKIK PKNLEQSFALDLLLDPDIQLVTLIGKAGTGKTLLALAVGLNLVADENMYERLLVSRPPISLGKELGFLPGSLDEKLAPWM KPIIDNLDYLTGSKFNKKGEKVAPKERDNNARNSWEDLKGMGLLEVEAINYIRGRSISHQFILIDEAQNLTPLEVKTIVT RAGEGTKIVFTGDPNQIDHPYLDSDSNGLTWLAKKLQGQKIVGHITLSQGERSDLAELAANIL
Sequences:
>Translated_463_residues MKKRVIVLDTNVLLHDPESPLHFTKDDVVIPIQVVEEVDRFKRDPSEKGRNARRVSRLLDSFRERGNLSSGVRINNKDAG QIKVAFCRKETTDRLPSELNDNSGDNKILAVALEHKTNKVLANSPDVILISKDTNLRIKADAIGLKAEDYSSNKISLDNL NRGFREVISDQNEINKIQKEGFIFLKDIKFNLKPSLYSNEGVILRDNLKENHTYLCRYDPIEKKLISLNWLRRSNLGKIK PKNLEQSFALDLLLDPDIQLVTLIGKAGTGKTLLALAVGLNLVADENMYERLLVSRPPISLGKELGFLPGSLDEKLAPWM KPIIDNLDYLTGSKFNKKGEKVAPKERDNNARNSWEDLKGMGLLEVEAINYIRGRSISHQFILIDEAQNLTPLEVKTIVT RAGEGTKIVFTGDPNQIDHPYLDSDSNGLTWLAKKLQGQKIVGHITLSQGERSDLAELAANIL >Mature_463_residues MKKRVIVLDTNVLLHDPESPLHFTKDDVVIPIQVVEEVDRFKRDPSEKGRNARRVSRLLDSFRERGNLSSGVRINNKDAG QIKVAFCRKETTDRLPSELNDNSGDNKILAVALEHKTNKVLANSPDVILISKDTNLRIKADAIGLKAEDYSSNKISLDNL NRGFREVISDQNEINKIQKEGFIFLKDIKFNLKPSLYSNEGVILRDNLKENHTYLCRYDPIEKKLISLNWLRRSNLGKIK PKNLEQSFALDLLLDPDIQLVTLIGKAGTGKTLLALAVGLNLVADENMYERLLVSRPPISLGKELGFLPGSLDEKLAPWM KPIIDNLDYLTGSKFNKKGEKVAPKERDNNARNSWEDLKGMGLLEVEAINYIRGRSISHQFILIDEAQNLTPLEVKTIVT RAGEGTKIVFTGDPNQIDHPYLDSDSNGLTWLAKKLQGQKIVGHITLSQGERSDLAELAANIL
Specific function: Unknown
COG id: COG1875
COG function: function code T; Predicted ATPase related to phosphate starvation-inducible protein PhoH
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PINc domain [H]
Homologues:
Organism=Escherichia coli, GI145693103, Length=188, Percent_Identity=36.1702127659575, Blast_Score=103, Evalue=3e-23, Organism=Escherichia coli, GI1787257, Length=185, Percent_Identity=29.7297297297297, Blast_Score=98, Evalue=1e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003714 - InterPro: IPR006596 [H]
Pfam domain/function: PF02562 PhoH [H]
EC number: NA
Molecular weight: Translated: 52011; Mature: 52011
Theoretical pI: Translated: 9.12; Mature: 9.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKRVIVLDTNVLLHDPESPLHFTKDDVVIPIQVVEEVDRFKRDPSEKGRNARRVSRLLD CCCEEEEEECCEEEECCCCCCCCCCCCEEEHHHHHHHHHHHHCCHHHCCCHHHHHHHHHH SFRERGNLSSGVRINNKDAGQIKVAFCRKETTDRLPSELNDNSGDNKILAVALEHKTNKV HHHHHCCCCCCCEECCCCCCEEEEEEECCCHHHHCCHHCCCCCCCCEEEEEEEECCCCEE LANSPDVILISKDTNLRIKADAIGLKAEDYSSNKISLDNLNRGFREVISDQNEINKIQKE ECCCCCEEEEECCCCEEEEEEEEEEEECCCCCCEEEHHHHHHHHHHHHCCHHHHHHHHHC GFIFLKDIKFNLKPSLYSNEGVILRDNLKENHTYLCRYDPIEKKLISLNWLRRSNLGKIK CEEEEEEEEEECCCCEECCCCEEEECCCCCCCEEEEEECCHHHHHHHHHHHHCCCCCCCC PKNLEQSFALDLLLDPDIQLVTLIGKAGTGKTLLALAVGLNLVADENMYERLLVSRPPIS CCCCCCCEEEEEEECCCCEEEEEEECCCCCHHHHHHHHCCCEEECCCHHHHHHHCCCCHH LGKELGFLPGSLDEKLAPWMKPIIDNLDYLTGSKFNKKGEKVAPKERDNNARNSWEDLKG HHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCC MGLLEVEAINYIRGRSISHQFILIDEAQNLTPLEVKTIVTRAGEGTKIVFTGDPNQIDHP CCEEEEHHHHHHCCCCCCEEEEEEECCCCCCCCEEEEEEEECCCCCEEEEECCCCCCCCC YLDSDSNGLTWLAKKLQGQKIVGHITLSQGERSDLAELAANIL CCCCCCCCHHHHHHHHCCCEEEEEEEECCCCCHHHHHHHHHCC >Mature Secondary Structure MKKRVIVLDTNVLLHDPESPLHFTKDDVVIPIQVVEEVDRFKRDPSEKGRNARRVSRLLD CCCEEEEEECCEEEECCCCCCCCCCCCEEEHHHHHHHHHHHHCCHHHCCCHHHHHHHHHH SFRERGNLSSGVRINNKDAGQIKVAFCRKETTDRLPSELNDNSGDNKILAVALEHKTNKV HHHHHCCCCCCCEECCCCCCEEEEEEECCCHHHHCCHHCCCCCCCCEEEEEEEECCCCEE LANSPDVILISKDTNLRIKADAIGLKAEDYSSNKISLDNLNRGFREVISDQNEINKIQKE ECCCCCEEEEECCCCEEEEEEEEEEEECCCCCCEEEHHHHHHHHHHHHCCHHHHHHHHHC GFIFLKDIKFNLKPSLYSNEGVILRDNLKENHTYLCRYDPIEKKLISLNWLRRSNLGKIK CEEEEEEEEEECCCCEECCCCEEEECCCCCCCEEEEEECCHHHHHHHHHHHHCCCCCCCC PKNLEQSFALDLLLDPDIQLVTLIGKAGTGKTLLALAVGLNLVADENMYERLLVSRPPIS CCCCCCCEEEEEEECCCCEEEEEEECCCCCHHHHHHHHCCCEEECCCHHHHHHHCCCCHH LGKELGFLPGSLDEKLAPWMKPIIDNLDYLTGSKFNKKGEKVAPKERDNNARNSWEDLKG HHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCC MGLLEVEAINYIRGRSISHQFILIDEAQNLTPLEVKTIVTRAGEGTKIVFTGDPNQIDHP CCEEEEHHHHHHCCCCCCEEEEEEECCCCCCCCEEEEEEEECCCCCEEEEECCCCCCCCC YLDSDSNGLTWLAKKLQGQKIVGHITLSQGERSDLAELAANIL CCCCCCCCHHHHHHHHCCCEEEEEEEECCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]