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The map label for this gene is rmuC [H]

Identifier: 123966451

GI number: 123966451

Start: 1075646

End: 1077241

Strand: Reverse

Name: rmuC [H]

Synonym: P9515_12181

Alternate gene names: 123966451

Gene position: 1077241-1075646 (Counterclockwise)

Preceding gene: 123966452

Following gene: 123966450

Centisome position: 63.21

GC content: 30.95

Gene sequence:

>1596_bases
TTGGATAATGTCCTTCTTTTCATCACAGGTGTTTTATCTGGAATTATTGTGGGTTTTATAATTAGTCGCTCTTATTCAAA
AAAATCAAGGACTAATGATGGAAGTAAAGAAAGCTTTCTAGAAGAAAATCTATTAAAGGTTGAAAAGAACCTTGAAGAAA
CTTTATTAGAACTTAATAATCAAAGAAAAGAAGTAAAAATTTATCAACAGAATTTATTAGAGTCAAGTGAGAAAGCTGCA
ATAAAAGAAACAGAATTAAAGGTTGTCTCAGAGGAAAAGATAAAGCTGGAGAATAATCAAAGAGAATTTAAAAAAGATTT
TGAATATCTCAGAAACCAAAAGGAAACTCTTGGTATTGAAATTGGAGAATTGAAGGAACAAAATAAATCACTATTTGAAG
AATCATCACGCATCGAATCTGAAAAAGAGAAATTAGAAGAGCTTCATAAAATTACTATAAGTGATAAAGAAATTCTTCGA
AATGAAAAAGAGAAACTCAATAATAGACTTGCTGAAATAAAAGAACAGTTAAAATCCCAAGAAACTCAAACTAAATTTCT
TGAGCAAGCTAAAGCTAATCTTGTTACACAATTTCGTGCACTAAGTGCCGAAATGCTTAAAGGATCAAAAGAAGATCTAT
TAAAAAGGACTAAAGAAACAGTTACAGAGCCATTTACAAAACAAGTTGAAATTCTTAGAAAGCAAGTGGAATTATTATCA
AAGGATTCGATAGAAAAATTGAGTGCGTTAAACCAAACAACAATTAATTTAGACAAAAAAAGTGATGATGTTAAGGGTGC
TGCAATGCAACTAACAAGTGCACTAAGATCACCCAACGTTAAGGGCAGATGGGGAGAAGTTAATTTAAAAAGAATTTTAG
AATTTGTAGGACTTATTAATTATTGTGATTTTGACGAGCAAGTTAGTATTGAAACTGAAGAGAAGGGTAGATTAAGACCC
GATTGTGTAATTACTATCCCTGGATCAAGAAGACTAATAGTTGACTCAAAGGCACCTATAGAAAGTTATTTAGATGCTAT
AAAAGAAACTGATCAAAATCTTCAAGAAAAGGCGGTAACAGACCATCTTAGAAAAGTGCGTAGCCATATTGATCAACTAG
CTAAAAAGGATTATGCAAATCAATTAAGTGAAATTGGTGAAGTAGTTGATGGAGTTGTTTTGTATATTCCAGTCGAGGGG
GCATTATCCATGGCTTTAGAGCGAGATCCTTATCTTTTAGAATATGCATTTGAGAAAAATATAATTCTTACTTTTCCTAC
AAGTCTCCTAGCAATACTGAAAGGATTTTCTATGACTATACAAAGAGCTGAGATGACAAAAAATATAAATGAGATTCAGC
AAATGTCTACGGAACTTCATAAGAGGTTTATAAACTTTGTAGAAAAGTTTTCTGCTATAGGTTCAAATATTTCTAAATTG
AATAAATCCTATAACGATGCGCAAGGATCTTATGAAAAGAGGTTATTACCTCAAGCAAAACGTATTGCTGAATTGTCCGG
ACAAAATCCTGAATTTAATACTACAAATGAAATCGATTCAAACATTAGAACATTTAAGTCTATAGATAATAACTAA

Upstream 100 bases:

>100_bases
TCGTAAATAAAAGAGCTTTTGATGTGATAGTAAATAATTTTTTTATTGATGTTTGATTTAAAAGATTTTATTAATATTAA
TTTAACTGCAAAGGAATCTA

Downstream 100 bases:

>100_bases
TCAATTTTTTGCAAGAAAGTAATGAAGGAATAATTAAAGTAAGAAAAAACAATAAATCTCCTACTTAATTTTTATACATA
TGGGGGAAACTAAAGCCCAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 531; Mature: 531

Protein sequence:

>531_residues
MDNVLLFITGVLSGIIVGFIISRSYSKKSRTNDGSKESFLEENLLKVEKNLEETLLELNNQRKEVKIYQQNLLESSEKAA
IKETELKVVSEEKIKLENNQREFKKDFEYLRNQKETLGIEIGELKEQNKSLFEESSRIESEKEKLEELHKITISDKEILR
NEKEKLNNRLAEIKEQLKSQETQTKFLEQAKANLVTQFRALSAEMLKGSKEDLLKRTKETVTEPFTKQVEILRKQVELLS
KDSIEKLSALNQTTINLDKKSDDVKGAAMQLTSALRSPNVKGRWGEVNLKRILEFVGLINYCDFDEQVSIETEEKGRLRP
DCVITIPGSRRLIVDSKAPIESYLDAIKETDQNLQEKAVTDHLRKVRSHIDQLAKKDYANQLSEIGEVVDGVVLYIPVEG
ALSMALERDPYLLEYAFEKNIILTFPTSLLAILKGFSMTIQRAEMTKNINEIQQMSTELHKRFINFVEKFSAIGSNISKL
NKSYNDAQGSYEKRLLPQAKRIAELSGQNPEFNTTNEIDSNIRTFKSIDNN

Sequences:

>Translated_531_residues
MDNVLLFITGVLSGIIVGFIISRSYSKKSRTNDGSKESFLEENLLKVEKNLEETLLELNNQRKEVKIYQQNLLESSEKAA
IKETELKVVSEEKIKLENNQREFKKDFEYLRNQKETLGIEIGELKEQNKSLFEESSRIESEKEKLEELHKITISDKEILR
NEKEKLNNRLAEIKEQLKSQETQTKFLEQAKANLVTQFRALSAEMLKGSKEDLLKRTKETVTEPFTKQVEILRKQVELLS
KDSIEKLSALNQTTINLDKKSDDVKGAAMQLTSALRSPNVKGRWGEVNLKRILEFVGLINYCDFDEQVSIETEEKGRLRP
DCVITIPGSRRLIVDSKAPIESYLDAIKETDQNLQEKAVTDHLRKVRSHIDQLAKKDYANQLSEIGEVVDGVVLYIPVEG
ALSMALERDPYLLEYAFEKNIILTFPTSLLAILKGFSMTIQRAEMTKNINEIQQMSTELHKRFINFVEKFSAIGSNISKL
NKSYNDAQGSYEKRLLPQAKRIAELSGQNPEFNTTNEIDSNIRTFKSIDNN
>Mature_531_residues
MDNVLLFITGVLSGIIVGFIISRSYSKKSRTNDGSKESFLEENLLKVEKNLEETLLELNNQRKEVKIYQQNLLESSEKAA
IKETELKVVSEEKIKLENNQREFKKDFEYLRNQKETLGIEIGELKEQNKSLFEESSRIESEKEKLEELHKITISDKEILR
NEKEKLNNRLAEIKEQLKSQETQTKFLEQAKANLVTQFRALSAEMLKGSKEDLLKRTKETVTEPFTKQVEILRKQVELLS
KDSIEKLSALNQTTINLDKKSDDVKGAAMQLTSALRSPNVKGRWGEVNLKRILEFVGLINYCDFDEQVSIETEEKGRLRP
DCVITIPGSRRLIVDSKAPIESYLDAIKETDQNLQEKAVTDHLRKVRSHIDQLAKKDYANQLSEIGEVVDGVVLYIPVEG
ALSMALERDPYLLEYAFEKNIILTFPTSLLAILKGFSMTIQRAEMTKNINEIQQMSTELHKRFINFVEKFSAIGSNISKL
NKSYNDAQGSYEKRLLPQAKRIAELSGQNPEFNTTNEIDSNIRTFKSIDNN

Specific function: Involved in DNA recombination [H]

COG id: COG1322

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rmuC family [H]

Homologues:

Organism=Escherichia coli, GI1790266, Length=395, Percent_Identity=27.0886075949367, Blast_Score=150, Evalue=2e-37,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003798 [H]

Pfam domain/function: PF02646 RmuC [H]

EC number: NA

Molecular weight: Translated: 60924; Mature: 60924

Theoretical pI: Translated: 5.78; Mature: 5.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDNVLLFITGVLSGIIVGFIISRSYSKKSRTNDGSKESFLEENLLKVEKNLEETLLELNN
CCCHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
QRKEVKIYQQNLLESSEKAAIKETELKVVSEEKIKLENNQREFKKDFEYLRNQKETLGIE
CHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHCCC
IGELKEQNKSLFEESSRIESEKEKLEELHKITISDKEILRNEKEKLNNRLAEIKEQLKSQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
ETQTKFLEQAKANLVTQFRALSAEMLKGSKEDLLKRTKETVTEPFTKQVEILRKQVELLS
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KDSIEKLSALNQTTINLDKKSDDVKGAAMQLTSALRSPNVKGRWGEVNLKRILEFVGLIN
HHHHHHHHHHCHHHEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHH
YCDFDEQVSIETEEKGRLRPDCVITIPGSRRLIVDSKAPIESYLDAIKETDQNLQEKAVT
HCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHH
DHLRKVRSHIDQLAKKDYANQLSEIGEVVDGVVLYIPVEGALSMALERDPYLLEYAFEKN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECHHHHHHHHCCCCCEEEEECCCC
IILTFPTSLLAILKGFSMTIQRAEMTKNINEIQQMSTELHKRFINFVEKFSAIGSNISKL
EEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
NKSYNDAQGSYEKRLLPQAKRIAELSGQNPEFNTTNEIDSNIRTFKSIDNN
HHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MDNVLLFITGVLSGIIVGFIISRSYSKKSRTNDGSKESFLEENLLKVEKNLEETLLELNN
CCCHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
QRKEVKIYQQNLLESSEKAAIKETELKVVSEEKIKLENNQREFKKDFEYLRNQKETLGIE
CHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHCCC
IGELKEQNKSLFEESSRIESEKEKLEELHKITISDKEILRNEKEKLNNRLAEIKEQLKSQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
ETQTKFLEQAKANLVTQFRALSAEMLKGSKEDLLKRTKETVTEPFTKQVEILRKQVELLS
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KDSIEKLSALNQTTINLDKKSDDVKGAAMQLTSALRSPNVKGRWGEVNLKRILEFVGLIN
HHHHHHHHHHCHHHEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHH
YCDFDEQVSIETEEKGRLRPDCVITIPGSRRLIVDSKAPIESYLDAIKETDQNLQEKAVT
HCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHH
DHLRKVRSHIDQLAKKDYANQLSEIGEVVDGVVLYIPVEGALSMALERDPYLLEYAFEKN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECHHHHHHHHCCCCCEEEEECCCC
IILTFPTSLLAILKGFSMTIQRAEMTKNINEIQQMSTELHKRFINFVEKFSAIGSNISKL
EEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
NKSYNDAQGSYEKRLLPQAKRIAELSGQNPEFNTTNEIDSNIRTFKSIDNN
HHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA