Definition Prochlorococcus marinus str. MIT 9515, complete genome.
Accession NC_008817
Length 1,704,176

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The map label for this gene is 123966450

Identifier: 123966450

GI number: 123966450

Start: 1074726

End: 1075472

Strand: Reverse

Name: 123966450

Synonym: P9515_12171

Alternate gene names: NA

Gene position: 1075472-1074726 (Counterclockwise)

Preceding gene: 123966451

Following gene: 123966448

Centisome position: 63.11

GC content: 32.93

Gene sequence:

>747_bases
ATGGGTTTGTTTGACTTTCTAAAAGATTTAAAACCTAAGATTAAACCCGAATGGAAGAAACGTGGTTGGGTTGATGAAAA
AGAATTTAGAGAACATAACTTTAGTCCTAATATGGTAAAAATGCTGGAAGAAGCAGATGAAGAAGAGAAAACTGGATTAT
TAACTTGGGAATATTTTGCTACTTTGCAATTAACAACACCTAAAATTCATCTTGAGAAACACGAAGAAGTACTAAAAAGT
GCAACTGAACCAGAATTATTTGGTGAACCTACTGGATATTCAGATGATGGAACTCCTTTTAGAAGATATGGTCATTGGAT
TCAAACGTCTGAATTTGCTCTAGATGGTGGTTGGGGTGAGTCTGCTGTAGGAGTACCAACAATAGTTGGAAACCTAAAAA
CAGAATCCCAAATGTATAAGGATTGGATAAATTATTTAATTGATTTTAGAACTATTGTGGAGTCCGATTTAACTATTGAA
GAAAAGCTATATCAGATTAATGATGTAATGTCGCAAAGTTCAACTGGCTATAAAAAAATCTATAAAATACTAGTTACTGA
ACATGGATTCCCAGACTCATTCTTTACTGATCTTTTATGTGAACTAGATGGTGTTGGTGGTAAAACTGCTGGATTACTTT
GGGATGCTGGTTATCTTTCAATAGAAGCTGTAAAAAATGCACCACAAGAAGAACTATTGAACATAAAAGGTATTGGTAAA
AAATTAGTAGAGAAGTTAAAAAGTTAA

Upstream 100 bases:

>100_bases
ATACATATGGGGGAAACTAAAGCCCAAATAACATTTTATTTAAAACCAAATATCTTATTGACAGTAGCTCTAAAGTAGAA
AATATAAATGTCATCTTTTT

Downstream 100 bases:

>100_bases
AATGCAACGCTTACTACTTGCACCACTGCTGTAAATTAAGCACTTTTTCAGAAAGTTTAAACTTTTTAGATCCCCCTACA
GATCCCTTTTCTCATTTGAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 248; Mature: 247

Protein sequence:

>248_residues
MGLFDFLKDLKPKIKPEWKKRGWVDEKEFREHNFSPNMVKMLEEADEEEKTGLLTWEYFATLQLTTPKIHLEKHEEVLKS
ATEPELFGEPTGYSDDGTPFRRYGHWIQTSEFALDGGWGESAVGVPTIVGNLKTESQMYKDWINYLIDFRTIVESDLTIE
EKLYQINDVMSQSSTGYKKIYKILVTEHGFPDSFFTDLLCELDGVGGKTAGLLWDAGYLSIEAVKNAPQEELLNIKGIGK
KLVEKLKS

Sequences:

>Translated_248_residues
MGLFDFLKDLKPKIKPEWKKRGWVDEKEFREHNFSPNMVKMLEEADEEEKTGLLTWEYFATLQLTTPKIHLEKHEEVLKS
ATEPELFGEPTGYSDDGTPFRRYGHWIQTSEFALDGGWGESAVGVPTIVGNLKTESQMYKDWINYLIDFRTIVESDLTIE
EKLYQINDVMSQSSTGYKKIYKILVTEHGFPDSFFTDLLCELDGVGGKTAGLLWDAGYLSIEAVKNAPQEELLNIKGIGK
KLVEKLKS
>Mature_247_residues
GLFDFLKDLKPKIKPEWKKRGWVDEKEFREHNFSPNMVKMLEEADEEEKTGLLTWEYFATLQLTTPKIHLEKHEEVLKSA
TEPELFGEPTGYSDDGTPFRRYGHWIQTSEFALDGGWGESAVGVPTIVGNLKTESQMYKDWINYLIDFRTIVESDLTIEE
KLYQINDVMSQSSTGYKKIYKILVTEHGFPDSFFTDLLCELDGVGGKTAGLLWDAGYLSIEAVKNAPQEELLNIKGIGKK
LVEKLKS

Specific function: Unknown

COG id: COG1204

COG function: function code R; Superfamily II helicase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28385; Mature: 28253

Theoretical pI: Translated: 4.68; Mature: 4.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGLFDFLKDLKPKIKPEWKKRGWVDEKEFREHNFSPNMVKMLEEADEEEKTGLLTWEYFA
CCHHHHHHHCCCCCCCCHHHCCCCCHHHHHHCCCCHHHHHHHHHCCHHHHCCCEEEEHEE
TLQLTTPKIHLEKHEEVLKSATEPELFGEPTGYSDDGTPFRRYGHWIQTSEFALDGGWGE
EEEEECCEEHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHCCHHCCCCEEEECCCCC
SAVGVPTIVGNLKTESQMYKDWINYLIDFRTIVESDLTIEEKLYQINDVMSQSSTGYKKI
CCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHH
YKILVTEHGFPDSFFTDLLCELDGVGGKTAGLLWDAGYLSIEAVKNAPQEELLNIKGIGK
HHHHHHCCCCCHHHHHHHHHHHCCCCCCCHHEEECCCCEEHHHHHCCCHHHHHHHHHHHH
KLVEKLKS
HHHHHHCC
>Mature Secondary Structure 
GLFDFLKDLKPKIKPEWKKRGWVDEKEFREHNFSPNMVKMLEEADEEEKTGLLTWEYFA
CHHHHHHHCCCCCCCCHHHCCCCCHHHHHHCCCCHHHHHHHHHCCHHHHCCCEEEEHEE
TLQLTTPKIHLEKHEEVLKSATEPELFGEPTGYSDDGTPFRRYGHWIQTSEFALDGGWGE
EEEEECCEEHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHCCHHCCCCEEEECCCCC
SAVGVPTIVGNLKTESQMYKDWINYLIDFRTIVESDLTIEEKLYQINDVMSQSSTGYKKI
CCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHH
YKILVTEHGFPDSFFTDLLCELDGVGGKTAGLLWDAGYLSIEAVKNAPQEELLNIKGIGK
HHHHHHCCCCCHHHHHHHHHHHCCCCCCCHHEEECCCCEEHHHHHCCCHHHHHHHHHHHH
KLVEKLKS
HHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA