| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
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The map label for this gene is 123966449
Identifier: 123966449
GI number: 123966449
Start: 1072786
End: 1074381
Strand: Direct
Name: 123966449
Synonym: P9515_12161
Alternate gene names: NA
Gene position: 1072786-1074381 (Clockwise)
Preceding gene: 123966447
Following gene: 123966453
Centisome position: 62.95
GC content: 32.33
Gene sequence:
>1596_bases ATGGTTATTCTAAAAGATATTTTATTGAGCAAAAAATTCTTCCCATTTATAAAGCGCGGTCAATCTAAGAATTTAATTTC TATATTATTAATTTCTATTTTTTCTGGTTATGGTTTTCAAAAGACGATAGCTGCAAACAATGAAACTAACATCACCGTTG GTCTAACATGCGGAATAATAGGTTGGAATAATGGAAAATGGGAGGAGCTTTCTTTAAATAGTGGACACTTAGATGCTCCT TGGTATACAGGTGAAAAAGGAGGGAATAGTTGGACAGAAAATGAAAATAATAAAGCTTCAAGGATATGGTCTGATAAATA TTTTGAACAAAATTCCATCAATTGGATAAGATTTGCATATTTTTCAGATGAAGTTACCCAACCCACAAGAACGATGGTTC GTCATCATAGATGGAAAAATTCTACTTCTAGTCAATTTACTTGGACTGATGATAATAGAGTTCAAAATTGGGCACAGTAT ATAGGTAACTGCTCAACTGAGAATGGTATACCTGATGTTGGCATTCCAAATGAAGATATTGAGTTGTTGGCAAAAAATAT AGTCTTAGAAGTATCAAATATTAGAGAAAACAACTATAAAATGGCACTAAACTTTTTACCGAAAAGTTTATTTGCAACAG GAGGGAAAGCTATTCAGGCTTATCAAAACGACCTCGTAACTGCAGTTAAAAAGAAATCAAAAAATAATAAAAAAGAAAAA GTTTCAATATGGACGTCAATATTTAGTGGAAATAACTCACCTTTTGATTTCAATACTAATAATTTTGGAGAATATGGGAA TTGGAAAAGTGATCACAATGGTTTTCTTATTGGTCTAACTAATGAAGTTGGTTCAAATAAATTTATTTCTATATTTGGGA ATAATGGTTCTGTTAAAGTCGATTTTCTTGATCAAGGAGGAGGAACATATAAACCTAAAGGGAATGGTTTTGGAATTGTT ATTGGTAATGAATCAGAAAAAAATTATTCGCATTTTCTTTTTAGTAATACTAGCTTTAGTGGGAAACACAATCGCGGACT TATCCCGGTAGGTGACTTTGCTGGTGGATCTGCGAGCGGGAATAAGAGCATAACTTCTTATGTTTTTGATCTAACCATTG GCAAGAAAAAAGAGGTAAATGGATTTCTCATTAATCCTGAAATAAGTGGCACCTGGAATCAAAATGTAGATCATGAATGG AAAGAGTCAGGAGGTGATCCATTTAATCTTCAGTACAGCGAATACAAAGATAATTTTCTTCTCACAGAAATCTCAATTGC CATATCAAAAAAGGCTAAAGTTTATGAGAAATTCATATTAACTCCAACAATTAAAGCTGGATGGATTGTTGATTGGGATT TAAATAATAAGCCAGCAACAATTACTAATCTCAAAAATAACCAAACAATAACTATTAAACCTGATGAACAAAACCAGCAA GGAATATTAATAGAGAGTTCTATAAAACTAGGTTCAACGAAAGAAAGTGAGTCCAAGCTTGAGGCTGAAGTTTCATATGG AATAAAACTTTGGGAATCAAACCAAAAGTTTTCTGATTGGAGCGCCGCAATAGGATTGTCTTATTATTTCGATTAA
Upstream 100 bases:
>100_bases ACAAATTACTATCCAAATATATGCATAAAAAATCTTATATTCTAAAATTTATGATTCTAAATTTTAAAAATACTAATAAT ATCTATATATAAGAACCTGA
Downstream 100 bases:
>100_bases TAATAGATAATCAATTTAGTGGACAAATAGTGGACAAATAGTGGACAAATGTTGCTTGAATTGTAATGACAAAATACGCA TAACTAAGAAATAAATTAGT
Product: hypothetical protein
Products: NA
Alternate protein names: Outer Membrane Autotransporter Barrel
Number of amino acids: Translated: 531; Mature: 531
Protein sequence:
>531_residues MVILKDILLSKKFFPFIKRGQSKNLISILLISIFSGYGFQKTIAANNETNITVGLTCGIIGWNNGKWEELSLNSGHLDAP WYTGEKGGNSWTENENNKASRIWSDKYFEQNSINWIRFAYFSDEVTQPTRTMVRHHRWKNSTSSQFTWTDDNRVQNWAQY IGNCSTENGIPDVGIPNEDIELLAKNIVLEVSNIRENNYKMALNFLPKSLFATGGKAIQAYQNDLVTAVKKKSKNNKKEK VSIWTSIFSGNNSPFDFNTNNFGEYGNWKSDHNGFLIGLTNEVGSNKFISIFGNNGSVKVDFLDQGGGTYKPKGNGFGIV IGNESEKNYSHFLFSNTSFSGKHNRGLIPVGDFAGGSASGNKSITSYVFDLTIGKKKEVNGFLINPEISGTWNQNVDHEW KESGGDPFNLQYSEYKDNFLLTEISIAISKKAKVYEKFILTPTIKAGWIVDWDLNNKPATITNLKNNQTITIKPDEQNQQ GILIESSIKLGSTKESESKLEAEVSYGIKLWESNQKFSDWSAAIGLSYYFD
Sequences:
>Translated_531_residues MVILKDILLSKKFFPFIKRGQSKNLISILLISIFSGYGFQKTIAANNETNITVGLTCGIIGWNNGKWEELSLNSGHLDAP WYTGEKGGNSWTENENNKASRIWSDKYFEQNSINWIRFAYFSDEVTQPTRTMVRHHRWKNSTSSQFTWTDDNRVQNWAQY IGNCSTENGIPDVGIPNEDIELLAKNIVLEVSNIRENNYKMALNFLPKSLFATGGKAIQAYQNDLVTAVKKKSKNNKKEK VSIWTSIFSGNNSPFDFNTNNFGEYGNWKSDHNGFLIGLTNEVGSNKFISIFGNNGSVKVDFLDQGGGTYKPKGNGFGIV IGNESEKNYSHFLFSNTSFSGKHNRGLIPVGDFAGGSASGNKSITSYVFDLTIGKKKEVNGFLINPEISGTWNQNVDHEW KESGGDPFNLQYSEYKDNFLLTEISIAISKKAKVYEKFILTPTIKAGWIVDWDLNNKPATITNLKNNQTITIKPDEQNQQ GILIESSIKLGSTKESESKLEAEVSYGIKLWESNQKFSDWSAAIGLSYYFD >Mature_531_residues MVILKDILLSKKFFPFIKRGQSKNLISILLISIFSGYGFQKTIAANNETNITVGLTCGIIGWNNGKWEELSLNSGHLDAP WYTGEKGGNSWTENENNKASRIWSDKYFEQNSINWIRFAYFSDEVTQPTRTMVRHHRWKNSTSSQFTWTDDNRVQNWAQY IGNCSTENGIPDVGIPNEDIELLAKNIVLEVSNIRENNYKMALNFLPKSLFATGGKAIQAYQNDLVTAVKKKSKNNKKEK VSIWTSIFSGNNSPFDFNTNNFGEYGNWKSDHNGFLIGLTNEVGSNKFISIFGNNGSVKVDFLDQGGGTYKPKGNGFGIV IGNESEKNYSHFLFSNTSFSGKHNRGLIPVGDFAGGSASGNKSITSYVFDLTIGKKKEVNGFLINPEISGTWNQNVDHEW KESGGDPFNLQYSEYKDNFLLTEISIAISKKAKVYEKFILTPTIKAGWIVDWDLNNKPATITNLKNNQTITIKPDEQNQQ GILIESSIKLGSTKESESKLEAEVSYGIKLWESNQKFSDWSAAIGLSYYFD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 59668; Mature: 59668
Theoretical pI: Translated: 8.49; Mature: 8.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVILKDILLSKKFFPFIKRGQSKNLISILLISIFSGYGFQKTIAANNETNITVGLTCGII CEEEHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCEEEEEEEEEEE GWNNGKWEELSLNSGHLDAPWYTGEKGGNSWTENENNKASRIWSDKYFEQNSINWIRFAY ECCCCCEEEEECCCCCCCCCEECCCCCCCCCCCCCCCCHHHEECHHCCCCCCCCEEEEEE FSDEVTQPTRTMVRHHRWKNSTSSQFTWTDDNRVQNWAQYIGNCSTENGIPDVGIPNEDI ECCCCCCHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHH ELLAKNIVLEVSNIRENNYKMALNFLPKSLFATGGKAIQAYQNDLVTAVKKKSKNNKKEK HHHHHHHEEEEECCCCCCEEEEEECCCHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCE VSIWTSIFSGNNSPFDFNTNNFGEYGNWKSDHNGFLIGLTNEVGSNKFISIFGNNGSVKV EEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEEEECCCEEEE DFLDQGGGTYKPKGNGFGIVIGNESEKNYSHFLFSNTSFSGKHNRGLIPVGDFAGGSASG EEEECCCCCCCCCCCEEEEEECCCCCCCCEEEEEECCCCCCCCCCCCEEECCCCCCCCCC NKSITSYVFDLTIGKKKEVNGFLINPEISGTWNQNVDHEWKESGGDPFNLQYSEYKDNFL CCCEEEEEEEEECCCCCCCCCEEECCCCCCCCCCCCCCHHHHCCCCEEEEEHHCCCCCEE LTEISIAISKKAKVYEKFILTPTIKAGWIVDWDLNNKPATITNLKNNQTITIKPDEQNQQ EEEEEEEECCHHHHHHHEEECCCCCCCEEEEECCCCCCEEEEECCCCCEEEECCCCCCCC GILIESSIKLGSTKESESKLEAEVSYGIKLWESNQKFSDWSAAIGLSYYFD CEEEEECCCCCCCCCCHHHHHEEEEECEEEEECCCCCCCHHHEEEEEEECC >Mature Secondary Structure MVILKDILLSKKFFPFIKRGQSKNLISILLISIFSGYGFQKTIAANNETNITVGLTCGII CEEEHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCEEEEEEEEEEE GWNNGKWEELSLNSGHLDAPWYTGEKGGNSWTENENNKASRIWSDKYFEQNSINWIRFAY ECCCCCEEEEECCCCCCCCCEECCCCCCCCCCCCCCCCHHHEECHHCCCCCCCCEEEEEE FSDEVTQPTRTMVRHHRWKNSTSSQFTWTDDNRVQNWAQYIGNCSTENGIPDVGIPNEDI ECCCCCCHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHH ELLAKNIVLEVSNIRENNYKMALNFLPKSLFATGGKAIQAYQNDLVTAVKKKSKNNKKEK HHHHHHHEEEEECCCCCCEEEEEECCCHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCE VSIWTSIFSGNNSPFDFNTNNFGEYGNWKSDHNGFLIGLTNEVGSNKFISIFGNNGSVKV EEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEEEECCCEEEE DFLDQGGGTYKPKGNGFGIVIGNESEKNYSHFLFSNTSFSGKHNRGLIPVGDFAGGSASG EEEECCCCCCCCCCCEEEEEECCCCCCCCEEEEEECCCCCCCCCCCCEEECCCCCCCCCC NKSITSYVFDLTIGKKKEVNGFLINPEISGTWNQNVDHEWKESGGDPFNLQYSEYKDNFL CCCEEEEEEEEECCCCCCCCCEEECCCCCCCCCCCCCCHHHHCCCCEEEEEHHCCCCCEE LTEISIAISKKAKVYEKFILTPTIKAGWIVDWDLNNKPATITNLKNNQTITIKPDEQNQQ EEEEEEEECCHHHHHHHEEECCCCCCCEEEEECCCCCCEEEEECCCCCEEEECCCCCCCC GILIESSIKLGSTKESESKLEAEVSYGIKLWESNQKFSDWSAAIGLSYYFD CEEEEECCCCCCCCCCHHHHHEEEEECEEEEECCCCCCCHHHEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA