Definition Prochlorococcus marinus str. MIT 9515, complete genome.
Accession NC_008817
Length 1,704,176

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The map label for this gene is 123966449

Identifier: 123966449

GI number: 123966449

Start: 1072786

End: 1074381

Strand: Direct

Name: 123966449

Synonym: P9515_12161

Alternate gene names: NA

Gene position: 1072786-1074381 (Clockwise)

Preceding gene: 123966447

Following gene: 123966453

Centisome position: 62.95

GC content: 32.33

Gene sequence:

>1596_bases
ATGGTTATTCTAAAAGATATTTTATTGAGCAAAAAATTCTTCCCATTTATAAAGCGCGGTCAATCTAAGAATTTAATTTC
TATATTATTAATTTCTATTTTTTCTGGTTATGGTTTTCAAAAGACGATAGCTGCAAACAATGAAACTAACATCACCGTTG
GTCTAACATGCGGAATAATAGGTTGGAATAATGGAAAATGGGAGGAGCTTTCTTTAAATAGTGGACACTTAGATGCTCCT
TGGTATACAGGTGAAAAAGGAGGGAATAGTTGGACAGAAAATGAAAATAATAAAGCTTCAAGGATATGGTCTGATAAATA
TTTTGAACAAAATTCCATCAATTGGATAAGATTTGCATATTTTTCAGATGAAGTTACCCAACCCACAAGAACGATGGTTC
GTCATCATAGATGGAAAAATTCTACTTCTAGTCAATTTACTTGGACTGATGATAATAGAGTTCAAAATTGGGCACAGTAT
ATAGGTAACTGCTCAACTGAGAATGGTATACCTGATGTTGGCATTCCAAATGAAGATATTGAGTTGTTGGCAAAAAATAT
AGTCTTAGAAGTATCAAATATTAGAGAAAACAACTATAAAATGGCACTAAACTTTTTACCGAAAAGTTTATTTGCAACAG
GAGGGAAAGCTATTCAGGCTTATCAAAACGACCTCGTAACTGCAGTTAAAAAGAAATCAAAAAATAATAAAAAAGAAAAA
GTTTCAATATGGACGTCAATATTTAGTGGAAATAACTCACCTTTTGATTTCAATACTAATAATTTTGGAGAATATGGGAA
TTGGAAAAGTGATCACAATGGTTTTCTTATTGGTCTAACTAATGAAGTTGGTTCAAATAAATTTATTTCTATATTTGGGA
ATAATGGTTCTGTTAAAGTCGATTTTCTTGATCAAGGAGGAGGAACATATAAACCTAAAGGGAATGGTTTTGGAATTGTT
ATTGGTAATGAATCAGAAAAAAATTATTCGCATTTTCTTTTTAGTAATACTAGCTTTAGTGGGAAACACAATCGCGGACT
TATCCCGGTAGGTGACTTTGCTGGTGGATCTGCGAGCGGGAATAAGAGCATAACTTCTTATGTTTTTGATCTAACCATTG
GCAAGAAAAAAGAGGTAAATGGATTTCTCATTAATCCTGAAATAAGTGGCACCTGGAATCAAAATGTAGATCATGAATGG
AAAGAGTCAGGAGGTGATCCATTTAATCTTCAGTACAGCGAATACAAAGATAATTTTCTTCTCACAGAAATCTCAATTGC
CATATCAAAAAAGGCTAAAGTTTATGAGAAATTCATATTAACTCCAACAATTAAAGCTGGATGGATTGTTGATTGGGATT
TAAATAATAAGCCAGCAACAATTACTAATCTCAAAAATAACCAAACAATAACTATTAAACCTGATGAACAAAACCAGCAA
GGAATATTAATAGAGAGTTCTATAAAACTAGGTTCAACGAAAGAAAGTGAGTCCAAGCTTGAGGCTGAAGTTTCATATGG
AATAAAACTTTGGGAATCAAACCAAAAGTTTTCTGATTGGAGCGCCGCAATAGGATTGTCTTATTATTTCGATTAA

Upstream 100 bases:

>100_bases
ACAAATTACTATCCAAATATATGCATAAAAAATCTTATATTCTAAAATTTATGATTCTAAATTTTAAAAATACTAATAAT
ATCTATATATAAGAACCTGA

Downstream 100 bases:

>100_bases
TAATAGATAATCAATTTAGTGGACAAATAGTGGACAAATAGTGGACAAATGTTGCTTGAATTGTAATGACAAAATACGCA
TAACTAAGAAATAAATTAGT

Product: hypothetical protein

Products: NA

Alternate protein names: Outer Membrane Autotransporter Barrel

Number of amino acids: Translated: 531; Mature: 531

Protein sequence:

>531_residues
MVILKDILLSKKFFPFIKRGQSKNLISILLISIFSGYGFQKTIAANNETNITVGLTCGIIGWNNGKWEELSLNSGHLDAP
WYTGEKGGNSWTENENNKASRIWSDKYFEQNSINWIRFAYFSDEVTQPTRTMVRHHRWKNSTSSQFTWTDDNRVQNWAQY
IGNCSTENGIPDVGIPNEDIELLAKNIVLEVSNIRENNYKMALNFLPKSLFATGGKAIQAYQNDLVTAVKKKSKNNKKEK
VSIWTSIFSGNNSPFDFNTNNFGEYGNWKSDHNGFLIGLTNEVGSNKFISIFGNNGSVKVDFLDQGGGTYKPKGNGFGIV
IGNESEKNYSHFLFSNTSFSGKHNRGLIPVGDFAGGSASGNKSITSYVFDLTIGKKKEVNGFLINPEISGTWNQNVDHEW
KESGGDPFNLQYSEYKDNFLLTEISIAISKKAKVYEKFILTPTIKAGWIVDWDLNNKPATITNLKNNQTITIKPDEQNQQ
GILIESSIKLGSTKESESKLEAEVSYGIKLWESNQKFSDWSAAIGLSYYFD

Sequences:

>Translated_531_residues
MVILKDILLSKKFFPFIKRGQSKNLISILLISIFSGYGFQKTIAANNETNITVGLTCGIIGWNNGKWEELSLNSGHLDAP
WYTGEKGGNSWTENENNKASRIWSDKYFEQNSINWIRFAYFSDEVTQPTRTMVRHHRWKNSTSSQFTWTDDNRVQNWAQY
IGNCSTENGIPDVGIPNEDIELLAKNIVLEVSNIRENNYKMALNFLPKSLFATGGKAIQAYQNDLVTAVKKKSKNNKKEK
VSIWTSIFSGNNSPFDFNTNNFGEYGNWKSDHNGFLIGLTNEVGSNKFISIFGNNGSVKVDFLDQGGGTYKPKGNGFGIV
IGNESEKNYSHFLFSNTSFSGKHNRGLIPVGDFAGGSASGNKSITSYVFDLTIGKKKEVNGFLINPEISGTWNQNVDHEW
KESGGDPFNLQYSEYKDNFLLTEISIAISKKAKVYEKFILTPTIKAGWIVDWDLNNKPATITNLKNNQTITIKPDEQNQQ
GILIESSIKLGSTKESESKLEAEVSYGIKLWESNQKFSDWSAAIGLSYYFD
>Mature_531_residues
MVILKDILLSKKFFPFIKRGQSKNLISILLISIFSGYGFQKTIAANNETNITVGLTCGIIGWNNGKWEELSLNSGHLDAP
WYTGEKGGNSWTENENNKASRIWSDKYFEQNSINWIRFAYFSDEVTQPTRTMVRHHRWKNSTSSQFTWTDDNRVQNWAQY
IGNCSTENGIPDVGIPNEDIELLAKNIVLEVSNIRENNYKMALNFLPKSLFATGGKAIQAYQNDLVTAVKKKSKNNKKEK
VSIWTSIFSGNNSPFDFNTNNFGEYGNWKSDHNGFLIGLTNEVGSNKFISIFGNNGSVKVDFLDQGGGTYKPKGNGFGIV
IGNESEKNYSHFLFSNTSFSGKHNRGLIPVGDFAGGSASGNKSITSYVFDLTIGKKKEVNGFLINPEISGTWNQNVDHEW
KESGGDPFNLQYSEYKDNFLLTEISIAISKKAKVYEKFILTPTIKAGWIVDWDLNNKPATITNLKNNQTITIKPDEQNQQ
GILIESSIKLGSTKESESKLEAEVSYGIKLWESNQKFSDWSAAIGLSYYFD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 59668; Mature: 59668

Theoretical pI: Translated: 8.49; Mature: 8.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVILKDILLSKKFFPFIKRGQSKNLISILLISIFSGYGFQKTIAANNETNITVGLTCGII
CEEEHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCEEEEEEEEEEE
GWNNGKWEELSLNSGHLDAPWYTGEKGGNSWTENENNKASRIWSDKYFEQNSINWIRFAY
ECCCCCEEEEECCCCCCCCCEECCCCCCCCCCCCCCCCHHHEECHHCCCCCCCCEEEEEE
FSDEVTQPTRTMVRHHRWKNSTSSQFTWTDDNRVQNWAQYIGNCSTENGIPDVGIPNEDI
ECCCCCCHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHH
ELLAKNIVLEVSNIRENNYKMALNFLPKSLFATGGKAIQAYQNDLVTAVKKKSKNNKKEK
HHHHHHHEEEEECCCCCCEEEEEECCCHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCE
VSIWTSIFSGNNSPFDFNTNNFGEYGNWKSDHNGFLIGLTNEVGSNKFISIFGNNGSVKV
EEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEEEECCCEEEE
DFLDQGGGTYKPKGNGFGIVIGNESEKNYSHFLFSNTSFSGKHNRGLIPVGDFAGGSASG
EEEECCCCCCCCCCCEEEEEECCCCCCCCEEEEEECCCCCCCCCCCCEEECCCCCCCCCC
NKSITSYVFDLTIGKKKEVNGFLINPEISGTWNQNVDHEWKESGGDPFNLQYSEYKDNFL
CCCEEEEEEEEECCCCCCCCCEEECCCCCCCCCCCCCCHHHHCCCCEEEEEHHCCCCCEE
LTEISIAISKKAKVYEKFILTPTIKAGWIVDWDLNNKPATITNLKNNQTITIKPDEQNQQ
EEEEEEEECCHHHHHHHEEECCCCCCCEEEEECCCCCCEEEEECCCCCEEEECCCCCCCC
GILIESSIKLGSTKESESKLEAEVSYGIKLWESNQKFSDWSAAIGLSYYFD
CEEEEECCCCCCCCCCHHHHHEEEEECEEEEECCCCCCCHHHEEEEEEECC
>Mature Secondary Structure
MVILKDILLSKKFFPFIKRGQSKNLISILLISIFSGYGFQKTIAANNETNITVGLTCGII
CEEEHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCEEEEEEEEEEE
GWNNGKWEELSLNSGHLDAPWYTGEKGGNSWTENENNKASRIWSDKYFEQNSINWIRFAY
ECCCCCEEEEECCCCCCCCCEECCCCCCCCCCCCCCCCHHHEECHHCCCCCCCCEEEEEE
FSDEVTQPTRTMVRHHRWKNSTSSQFTWTDDNRVQNWAQYIGNCSTENGIPDVGIPNEDI
ECCCCCCHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHH
ELLAKNIVLEVSNIRENNYKMALNFLPKSLFATGGKAIQAYQNDLVTAVKKKSKNNKKEK
HHHHHHHEEEEECCCCCCEEEEEECCCHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCE
VSIWTSIFSGNNSPFDFNTNNFGEYGNWKSDHNGFLIGLTNEVGSNKFISIFGNNGSVKV
EEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEEEECCCEEEE
DFLDQGGGTYKPKGNGFGIVIGNESEKNYSHFLFSNTSFSGKHNRGLIPVGDFAGGSASG
EEEECCCCCCCCCCCEEEEEECCCCCCCCEEEEEECCCCCCCCCCCCEEECCCCCCCCCC
NKSITSYVFDLTIGKKKEVNGFLINPEISGTWNQNVDHEWKESGGDPFNLQYSEYKDNFL
CCCEEEEEEEEECCCCCCCCCEEECCCCCCCCCCCCCCHHHHCCCCEEEEEHHCCCCCEE
LTEISIAISKKAKVYEKFILTPTIKAGWIVDWDLNNKPATITNLKNNQTITIKPDEQNQQ
EEEEEEEECCHHHHHHHEEECCCCCCCEEEEECCCCCCEEEEECCCCCEEEECCCCCCCC
GILIESSIKLGSTKESESKLEAEVSYGIKLWESNQKFSDWSAAIGLSYYFD
CEEEEECCCCCCCCCCHHHHHEEEEECEEEEECCCCCCCHHHEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA