| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
Click here to switch to the map view.
The map label for this gene is 123966433
Identifier: 123966433
GI number: 123966433
Start: 1060314
End: 1060832
Strand: Direct
Name: 123966433
Synonym: P9515_12001
Alternate gene names: NA
Gene position: 1060314-1060832 (Clockwise)
Preceding gene: 123966432
Following gene: 123966434
Centisome position: 62.22
GC content: 34.87
Gene sequence:
>519_bases ATGAAATTCTTAAAATTAATTCCAATAATCTTTATATTTTTAGGAATATTTCCCTCTTCAAACTTAATTTATGCGGAGGG TCAAGATCCAAATTCTTATAAAGTACTCTCAAATAATAATAAAAAGCTTTCAATTAAAAACGTTCAAGCTTACATAACCG AAGGAGATACTTTTATCGAAAAAGGTAATTTTGATGAAGCTAAAAGCTCATATGATAAGGCACGAAATTTAGCGAAACAA CTCGCAGGCTTTTATAGAGATTTAAATGGCGCCTTTAGAGGACTAGATTCTCGAATCCCCGATGAAACAGGTGAAAAGGG TAGGGAATCGATAAGGATTTGGGCAGAGTCTAATGCAAGATTAGTAGCACTTTACAAGAGAAGGAATCAGCCAGAAGTTG CCGTTCCTTTACTTGTAGAGATCATCAGATTAATGTCTCCAAAAAGCTCAACAGGGAAAGAGGCTTATAAAGATTTAATC CAGCTTGGTTTTGTTGAAACACCCTATAGAGGATCCTAG
Upstream 100 bases:
>100_bases AAAATGAAAACCGCTGAAAACGAAGCATTAAAAAATGTCGGTCGATGAATCTATAATCAGTTAGTATTAATTAGTATTAA ATTGAATAAATCAAAAGAAT
Downstream 100 bases:
>100_bases GAAACGTAATGACCACTAGATACGAAGTAATTAACCTGATAAAACAGAAAATTTCCGATTCTGAAGTTTTTGTTGAAAAT CTAAAAGGAAATGATCATTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 172; Mature: 172
Protein sequence:
>172_residues MKFLKLIPIIFIFLGIFPSSNLIYAEGQDPNSYKVLSNNNKKLSIKNVQAYITEGDTFIEKGNFDEAKSSYDKARNLAKQ LAGFYRDLNGAFRGLDSRIPDETGEKGRESIRIWAESNARLVALYKRRNQPEVAVPLLVEIIRLMSPKSSTGKEAYKDLI QLGFVETPYRGS
Sequences:
>Translated_172_residues MKFLKLIPIIFIFLGIFPSSNLIYAEGQDPNSYKVLSNNNKKLSIKNVQAYITEGDTFIEKGNFDEAKSSYDKARNLAKQ LAGFYRDLNGAFRGLDSRIPDETGEKGRESIRIWAESNARLVALYKRRNQPEVAVPLLVEIIRLMSPKSSTGKEAYKDLI QLGFVETPYRGS >Mature_172_residues MKFLKLIPIIFIFLGIFPSSNLIYAEGQDPNSYKVLSNNNKKLSIKNVQAYITEGDTFIEKGNFDEAKSSYDKARNLAKQ LAGFYRDLNGAFRGLDSRIPDETGEKGRESIRIWAESNARLVALYKRRNQPEVAVPLLVEIIRLMSPKSSTGKEAYKDLI QLGFVETPYRGS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19458; Mature: 19458
Theoretical pI: Translated: 9.93; Mature: 9.93
Prosite motif: PS50005 TPR ; PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFLKLIPIIFIFLGIFPSSNLIYAEGQDPNSYKVLSNNNKKLSIKNVQAYITEGDTFIE CHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCEEEEECCCCEEEEEHEEEEEECCCCEEE KGNFDEAKSSYDKARNLAKQLAGFYRDLNGAFRGLDSRIPDETGEKGRESIRIWAESNAR CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHEEEEEECCCCE LVALYKRRNQPEVAVPLLVEIIRLMSPKSSTGKEAYKDLIQLGFVETPYRGS EEEEEECCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MKFLKLIPIIFIFLGIFPSSNLIYAEGQDPNSYKVLSNNNKKLSIKNVQAYITEGDTFIE CHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCEEEEECCCCEEEEEHEEEEEECCCCEEE KGNFDEAKSSYDKARNLAKQLAGFYRDLNGAFRGLDSRIPDETGEKGRESIRIWAESNAR CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHEEEEEECCCCE LVALYKRRNQPEVAVPLLVEIIRLMSPKSSTGKEAYKDLIQLGFVETPYRGS EEEEEECCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA