| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
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The map label for this gene is psbP
Identifier: 123966422
GI number: 123966422
Start: 1044837
End: 1045421
Strand: Direct
Name: psbP
Synonym: P9515_11891
Alternate gene names: NA
Gene position: 1044837-1045421 (Clockwise)
Preceding gene: 123966419
Following gene: 123966432
Centisome position: 61.31
GC content: 29.4
Gene sequence:
>585_bases ATGTTTTTAATTAATAATTTCTTAAAAATGAAGAATATTAAATTTAAACCTTTTAAATACCTATTATTAATATTTTTATG TTTTACCTTAAGTGCATGCAGTGGAGGACTTAATGCAGGATTAGAGGCTTATCAAAGTCCTGATGGAAGATATGCTTTTT TATATCCAACAGGTTGGACTCGAGTGAAAGTAGATGGCGGTCCTGAAATTATTTATCATGATTTAATTAATAGTAACGAA ACACTTAGTTTAGTTATTTCAGAAGTGAATAAAGAAATTGATTTAGAACAATTAGGTAGTCCAACTGAAGTTGGGCAAAC TTTAATAGATAAAGTCATTGCTCCTGAAGGTTCAGGTAGATCAGTTCAACTTGTTAATGCAAATAAAAGAGAGTCCTCAA ATCATATTTTTTATGATTTGGAATATAAGTTAAATCTTAATGATCAAGATAGGCATGAACTAGCTACTGTAGTAATTGAT AGAGGAACTTTATACACATTTGCAGTAGGAACGAACGAAAGCCGGTGGAATAAAGTTAATGGTATGTTTAATAATGTTAT TGATTCTTTTAACTTCTTAATCTAG
Upstream 100 bases:
>100_bases AAGTGGTTTGGTAAAAGTTGTCAAGGTAAAATTTCTTCTAAGATTAATTTAGACGCATATTTTGAAATTTGTTCTATTTG TTTGCTTTTAATGTCTTATT
Downstream 100 bases:
>100_bases TTAAAGAGATTTTTTTAAATCCCGACCTGTACATTCCACAAATCTGAATATAAATTCTTTTTATTTAGTAAAAACTGATG ATTTCCGCTCTCAATAATTC
Product: photosystem II oxygen evolving complex protein PsbP
Products: NA
Alternate protein names: Photosystem II Oxygen-Evolving Complex; Photosystem II PsbP Protein; Photosystem II Oxygen Evolution Complex Protein PsbP
Number of amino acids: Translated: 194; Mature: 194
Protein sequence:
>194_residues MFLINNFLKMKNIKFKPFKYLLLIFLCFTLSACSGGLNAGLEAYQSPDGRYAFLYPTGWTRVKVDGGPEIIYHDLINSNE TLSLVISEVNKEIDLEQLGSPTEVGQTLIDKVIAPEGSGRSVQLVNANKRESSNHIFYDLEYKLNLNDQDRHELATVVID RGTLYTFAVGTNESRWNKVNGMFNNVIDSFNFLI
Sequences:
>Translated_194_residues MFLINNFLKMKNIKFKPFKYLLLIFLCFTLSACSGGLNAGLEAYQSPDGRYAFLYPTGWTRVKVDGGPEIIYHDLINSNE TLSLVISEVNKEIDLEQLGSPTEVGQTLIDKVIAPEGSGRSVQLVNANKRESSNHIFYDLEYKLNLNDQDRHELATVVID RGTLYTFAVGTNESRWNKVNGMFNNVIDSFNFLI >Mature_194_residues MFLINNFLKMKNIKFKPFKYLLLIFLCFTLSACSGGLNAGLEAYQSPDGRYAFLYPTGWTRVKVDGGPEIIYHDLINSNE TLSLVISEVNKEIDLEQLGSPTEVGQTLIDKVIAPEGSGRSVQLVNANKRESSNHIFYDLEYKLNLNDQDRHELATVVID RGTLYTFAVGTNESRWNKVNGMFNNVIDSFNFLI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21940; Mature: 21940
Theoretical pI: Translated: 5.28; Mature: 5.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFLINNFLKMKNIKFKPFKYLLLIFLCFTLSACSGGLNAGLEAYQSPDGRYAFLYPTGWT CEEECCHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCEEEEECCCCE RVKVDGGPEIIYHDLINSNETLSLVISEVNKEIDLEQLGSPTEVGQTLIDKVIAPEGSGR EEEECCCCCEEEEECCCCCCHHHHEEEHHCCCCCHHHCCCHHHHHHHHHHHHHCCCCCCC SVQLVNANKRESSNHIFYDLEYKLNLNDQDRHELATVVIDRGTLYTFAVGTNESRWNKVN EEEEEECCCCCCCCEEEEEEEEEECCCCCCHHHEEEEEEECCCEEEEEEECCCCHHHHHH GMFNNVIDSFNFLI HHHHHHHHHHHHCC >Mature Secondary Structure MFLINNFLKMKNIKFKPFKYLLLIFLCFTLSACSGGLNAGLEAYQSPDGRYAFLYPTGWT CEEECCHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCEEEEECCCCE RVKVDGGPEIIYHDLINSNETLSLVISEVNKEIDLEQLGSPTEVGQTLIDKVIAPEGSGR EEEECCCCCEEEEECCCCCCHHHHEEEHHCCCCCHHHCCCHHHHHHHHHHHHHCCCCCCC SVQLVNANKRESSNHIFYDLEYKLNLNDQDRHELATVVIDRGTLYTFAVGTNESRWNKVN EEEEEECCCCCCCCEEEEEEEEEECCCCCCHHHEEEEEEECCCEEEEEEECCCCHHHHHH GMFNNVIDSFNFLI HHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA