| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
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The map label for this gene is 123966402
Identifier: 123966402
GI number: 123966402
Start: 1023385
End: 1023810
Strand: Direct
Name: 123966402
Synonym: P9515_11691
Alternate gene names: NA
Gene position: 1023385-1023810 (Clockwise)
Preceding gene: 123966401
Following gene: 123966404
Centisome position: 60.05
GC content: 29.58
Gene sequence:
>426_bases ATGTTTACAAAAATATATTCAAAAAAAATCTTTAATTTAGTAAGTCTTCCAATACTTTTATTTCTAACTTTTTTTTACGT AACAATCTTTAATAAAGAGATTAAATCAGACAAGAAAATTCAGGCTGCTACGGAAGAAGATTTATATTTGTATAAAGGTA TGGGAGCTTCATATCTTTGTATCGCTTCAAAAGCTGGTATAAAATTCCCAAAAGCTGTTGGTGTTGCTACTGCAACCTAC GTACAAGTAATAGAGGGCAAACATGGAGGAATAATTAAAGAATTAGGGGATAAAAAGTTGGAGAGAGATAAATTATTTGC AGGTGCAGAATTTCAAATAGTTACTACAGCAATAAAGTATTGTCCTGATAGTGTTCCGAAAGATGTGACGAAAAAAGTTA ACGAAATTCTAAAAGAAAATAAATAA
Upstream 100 bases:
>100_bases GACTCATCACGAAATTAAAATTATTACATAAGTTCGATTGGCTGATAGAGTTTAAAAATAAAAAATGTTATCTTTAGGTA ATAAATAAAAGAAGTAATTA
Downstream 100 bases:
>100_bases ATAAATAAATTAATTATCTAAACATAGAACTAACAGAGCTTTCTTCATGAATCCTCCAAATTGCCTCTCCCAACATATTA GCGACAGAAAGTACTTTTAA
Product: Villin headpiece domain-containing protein
Products: NA
Alternate protein names: CAMP Phosphodiesterases Class-II; CAMP Phosphodiesterase Class-II
Number of amino acids: Translated: 141; Mature: 141
Protein sequence:
>141_residues MFTKIYSKKIFNLVSLPILLFLTFFYVTIFNKEIKSDKKIQAATEEDLYLYKGMGASYLCIASKAGIKFPKAVGVATATY VQVIEGKHGGIIKELGDKKLERDKLFAGAEFQIVTTAIKYCPDSVPKDVTKKVNEILKENK
Sequences:
>Translated_141_residues MFTKIYSKKIFNLVSLPILLFLTFFYVTIFNKEIKSDKKIQAATEEDLYLYKGMGASYLCIASKAGIKFPKAVGVATATY VQVIEGKHGGIIKELGDKKLERDKLFAGAEFQIVTTAIKYCPDSVPKDVTKKVNEILKENK >Mature_141_residues MFTKIYSKKIFNLVSLPILLFLTFFYVTIFNKEIKSDKKIQAATEEDLYLYKGMGASYLCIASKAGIKFPKAVGVATATY VQVIEGKHGGIIKELGDKKLERDKLFAGAEFQIVTTAIKYCPDSVPKDVTKKVNEILKENK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15810; Mature: 15810
Theoretical pI: Translated: 9.89; Mature: 9.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFTKIYSKKIFNLVSLPILLFLTFFYVTIFNKEIKSDKKIQAATEEDLYLYKGMGASYLC CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCEEEECCCCCCEEE IASKAGIKFPKAVGVATATYVQVIEGKHGGIIKELGDKKLERDKLFAGAEFQIVTTAIKY EECCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH CPDSVPKDVTKKVNEILKENK CCCCCCHHHHHHHHHHHHCCC >Mature Secondary Structure MFTKIYSKKIFNLVSLPILLFLTFFYVTIFNKEIKSDKKIQAATEEDLYLYKGMGASYLC CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCEEEECCCCCCEEE IASKAGIKFPKAVGVATATYVQVIEGKHGGIIKELGDKKLERDKLFAGAEFQIVTTAIKY EECCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH CPDSVPKDVTKKVNEILKENK CCCCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA