| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
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The map label for this gene is 123966343
Identifier: 123966343
GI number: 123966343
Start: 972439
End: 973191
Strand: Direct
Name: 123966343
Synonym: P9515_11101
Alternate gene names: NA
Gene position: 972439-973191 (Clockwise)
Preceding gene: 123966342
Following gene: 123966344
Centisome position: 57.06
GC content: 30.01
Gene sequence:
>753_bases ATGCAAGATACAGATGAAGTAAAAAAGAAGATATACCAAATAGCCGCAATCACAGATAGAGGTCAAAGATTAAATAAACT TATATCCCCCATATATCAGGAAAAATTAGAAGAGATGGAAGCTTTGATAAAAATTCTTGAATGTTTAAATTTTGAAATAT CAGAAGAAAAATTATCTGGTGAGTGGGAACTAATTTATTCAACAGTGGAATTATTTAGGAGTTCTCCATTTTTCTTGGCT ATTGAAAAAGCACTTAATGACGAATTCAAAAGTAATCTCTTTTTTAAACTTCATCAGTTGCAAGTTGGATCATTTGGTTT ATCTACTATTGGAAGAATTGCCCAAAATATTGATTTTAATAAAAAAGAATTCATATCTACATTCGACACAATAATTTTTG GCCTTTCTACAATCCCTATCCTTGGTTGGTTTAAGCTTCTTCCAACATTTGGTGGAAGAGTAATTACCCTTGCTGATGAT TTAAATTTAAAAGATAATTCACTTCAAATGAATTTGCAAAAGACTAAAGTCTCAAAAGTCGAGGGACTAAATAAAATTCC AATATTTAGTACACTTCTCATGGATAGATGGTATCCAGTAAAAGGAGTTTGGGATAAATTGCCCTGGAATAAAGAATCTC CGTCTTGCGAAGTTTCAATAATATATTTAGATGAAGAAATGAGGATTATGAAAGATATTTATGGATCGATTTTTATTTAC GTTAGACCAACAATATCATTGTTAAAATCCTAA
Upstream 100 bases:
>100_bases AAAAAGATGGGGTGAATATTGAGCGTAATTTTATTACTAGTATTACTAGATCCACTATTGAAAGATAATTATTAATAGAA TCAAAAAAAAATATTTAATT
Downstream 100 bases:
>100_bases ATAATAGTATTTATCAATTTAATAATTAACTTTAGACTTTTCAACTCTTGGCAAAGTTATTTGTATATAAAAGTGGTAGA ACTATATTTTATTTAAAAAC
Product: pili assembly chaperone
Products: NA
Alternate protein names: Gram-Negative Pili Assembly Chaperone
Number of amino acids: Translated: 250; Mature: 250
Protein sequence:
>250_residues MQDTDEVKKKIYQIAAITDRGQRLNKLISPIYQEKLEEMEALIKILECLNFEISEEKLSGEWELIYSTVELFRSSPFFLA IEKALNDEFKSNLFFKLHQLQVGSFGLSTIGRIAQNIDFNKKEFISTFDTIIFGLSTIPILGWFKLLPTFGGRVITLADD LNLKDNSLQMNLQKTKVSKVEGLNKIPIFSTLLMDRWYPVKGVWDKLPWNKESPSCEVSIIYLDEEMRIMKDIYGSIFIY VRPTISLLKS
Sequences:
>Translated_250_residues MQDTDEVKKKIYQIAAITDRGQRLNKLISPIYQEKLEEMEALIKILECLNFEISEEKLSGEWELIYSTVELFRSSPFFLA IEKALNDEFKSNLFFKLHQLQVGSFGLSTIGRIAQNIDFNKKEFISTFDTIIFGLSTIPILGWFKLLPTFGGRVITLADD LNLKDNSLQMNLQKTKVSKVEGLNKIPIFSTLLMDRWYPVKGVWDKLPWNKESPSCEVSIIYLDEEMRIMKDIYGSIFIY VRPTISLLKS >Mature_250_residues MQDTDEVKKKIYQIAAITDRGQRLNKLISPIYQEKLEEMEALIKILECLNFEISEEKLSGEWELIYSTVELFRSSPFFLA IEKALNDEFKSNLFFKLHQLQVGSFGLSTIGRIAQNIDFNKKEFISTFDTIIFGLSTIPILGWFKLLPTFGGRVITLADD LNLKDNSLQMNLQKTKVSKVEGLNKIPIFSTLLMDRWYPVKGVWDKLPWNKESPSCEVSIIYLDEEMRIMKDIYGSIFIY VRPTISLLKS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28940; Mature: 28940
Theoretical pI: Translated: 5.50; Mature: 5.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQDTDEVKKKIYQIAAITDRGQRLNKLISPIYQEKLEEMEALIKILECLNFEISEEKLSG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCC EWELIYSTVELFRSSPFFLAIEKALNDEFKSNLFFKLHQLQVGSFGLSTIGRIAQNIDFN CHHHHHHHHHHHHCCCHHEEHHHHHHHHHHHHHHHHHEEHEECCCCHHHHHHHHHCCCCC KKEFISTFDTIIFGLSTIPILGWFKLLPTFGGRVITLADDLNLKDNSLQMNLQKTKVSKV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCEEEEHHHHHHHHH EGLNKIPIFSTLLMDRWYPVKGVWDKLPWNKESPSCEVSIIYLDEEMRIMKDIYGSIFIY CCCCCCHHHHHHHHHCCCCCCCHHHCCCCCCCCCCCEEEEEEECHHHHHHHHHHHHEEEE VRPTISLLKS EECHHHHHCC >Mature Secondary Structure MQDTDEVKKKIYQIAAITDRGQRLNKLISPIYQEKLEEMEALIKILECLNFEISEEKLSG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCC EWELIYSTVELFRSSPFFLAIEKALNDEFKSNLFFKLHQLQVGSFGLSTIGRIAQNIDFN CHHHHHHHHHHHHCCCHHEEHHHHHHHHHHHHHHHHHEEHEECCCCHHHHHHHHHCCCCC KKEFISTFDTIIFGLSTIPILGWFKLLPTFGGRVITLADDLNLKDNSLQMNLQKTKVSKV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCEEEEHHHHHHHHH EGLNKIPIFSTLLMDRWYPVKGVWDKLPWNKESPSCEVSIIYLDEEMRIMKDIYGSIFIY CCCCCCHHHHHHHHHCCCCCCCHHHCCCCCCCCCCCEEEEEEECHHHHHHHHHHHHEEEE VRPTISLLKS EECHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA