| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
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The map label for this gene is 123966325
Identifier: 123966325
GI number: 123966325
Start: 963078
End: 963839
Strand: Reverse
Name: 123966325
Synonym: P9515_10921
Alternate gene names: NA
Gene position: 963839-963078 (Counterclockwise)
Preceding gene: 123966326
Following gene: 123966323
Centisome position: 56.56
GC content: 30.05
Gene sequence:
>762_bases ATGAATTTTTTAGGTTTAAATTCTCCAGTAATTTTTATAATATCAGTAATTATTCTTATAATTTTAGGTCCAAAAAGAAT AGAAAAAGGTTGGTTTTTATTCCAACGTTTATTAAAGTTTCTTTTAAGTAATAAAAATGATTTTTCTAATGAGATATTAA ATGATGGCTCGCAAATAAATTTGAATTCACTAGAAAAAAGTATTACCGAAGTGAAAGAAGAGGAAAAGGCAGAGAAAGTT GGTATTAATGAAGTAAAAGAAGCGGAAAAGGCAGAGAAAGTTGGTATTAATGAAGTAAAAGAAGAGGGAAAGGCAGAGAA AGCAGTTATTAATGAAGTGAAAGAAGAGGAAAAGGCAGAGAAAGCAGTTATCAATGAAGTGAAAGAAGAGGAAAAGGCAG AGAAAGCAGTTATTAATGAAGTGAAAGAAGAGGAAAAGGCAGAGAAAGCAGTTATTAATGAAGTGAAAGAAGAGGAAAAG GCAGAGAAAGCAGTTATTAATGAAGTGAAAGAAGAGGAAAAGGCAGAGAAAGCAATTGGTATTGAAGTCAATAAAAATCT AACAAAATCAAAGTTAGAAGCAAAAGAAAAAAAGTCAGTAAAAGCAGGGGATATTGAAGTCAATAAAAAGCTAACAAAAT CAAAGTTAGAAGCAAAAGAAAAAAAGTCAGTAAAAGCAGAGGATATTGAAGTCAACAAAGAGGCAAAAAAATCAAAGTCT GAGTTAATAAAAGAAAAGTCAGATAAAACAGAGGGTATTTAA
Upstream 100 bases:
>100_bases GATTATTGCTTCAAATAGAGAGCTTTATTTACCGACGTTTGAAAATAATTAGCCTTAATTTTTGTGATGTACTAAAGTAC AATCAGAATATTTTAAATTG
Downstream 100 bases:
>100_bases GTAAACTAAGATTCAAGAAATCAAATTTAGAGAGTAAATTTTACTACTTGTATATAATTAAATATTATCTAAGCTTAATA ATTCTACCTATAATCATTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 253; Mature: 253
Protein sequence:
>253_residues MNFLGLNSPVIFIISVIILIILGPKRIEKGWFLFQRLLKFLLSNKNDFSNEILNDGSQINLNSLEKSITEVKEEEKAEKV GINEVKEAEKAEKVGINEVKEEGKAEKAVINEVKEEEKAEKAVINEVKEEEKAEKAVINEVKEEEKAEKAVINEVKEEEK AEKAVINEVKEEEKAEKAIGIEVNKNLTKSKLEAKEKKSVKAGDIEVNKKLTKSKLEAKEKKSVKAEDIEVNKEAKKSKS ELIKEKSDKTEGI
Sequences:
>Translated_253_residues MNFLGLNSPVIFIISVIILIILGPKRIEKGWFLFQRLLKFLLSNKNDFSNEILNDGSQINLNSLEKSITEVKEEEKAEKV GINEVKEAEKAEKVGINEVKEEGKAEKAVINEVKEEEKAEKAVINEVKEEEKAEKAVINEVKEEEKAEKAVINEVKEEEK AEKAVINEVKEEEKAEKAIGIEVNKNLTKSKLEAKEKKSVKAGDIEVNKKLTKSKLEAKEKKSVKAEDIEVNKEAKKSKS ELIKEKSDKTEGI >Mature_253_residues MNFLGLNSPVIFIISVIILIILGPKRIEKGWFLFQRLLKFLLSNKNDFSNEILNDGSQINLNSLEKSITEVKEEEKAEKV GINEVKEAEKAEKVGINEVKEEGKAEKAVINEVKEEEKAEKAVINEVKEEEKAEKAVINEVKEEEKAEKAVINEVKEEEK AEKAVINEVKEEEKAEKAIGIEVNKNLTKSKLEAKEKKSVKAGDIEVNKKLTKSKLEAKEKKSVKAEDIEVNKEAKKSKS ELIKEKSDKTEGI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28541; Mature: 28541
Theoretical pI: Translated: 5.11; Mature: 5.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 0.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 0.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNFLGLNSPVIFIISVIILIILGPKRIEKGWFLFQRLLKFLLSNKNDFSNEILNDGSQIN CCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCC LNSLEKSITEVKEEEKAEKVGINEVKEAEKAEKVGINEVKEEGKAEKAVINEVKEEEKAE HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH KAVINEVKEEEKAEKAVINEVKEEEKAEKAVINEVKEEEKAEKAVINEVKEEEKAEKAIG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC IEVNKNLTKSKLEAKEKKSVKAGDIEVNKKLTKSKLEAKEKKSVKAEDIEVNKEAKKSKS CCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHH ELIKEKSDKTEGI HHHHHHCCCCCCC >Mature Secondary Structure MNFLGLNSPVIFIISVIILIILGPKRIEKGWFLFQRLLKFLLSNKNDFSNEILNDGSQIN CCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCC LNSLEKSITEVKEEEKAEKVGINEVKEAEKAEKVGINEVKEEGKAEKAVINEVKEEEKAE HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH KAVINEVKEEEKAEKAVINEVKEEEKAEKAVINEVKEEEKAEKAVINEVKEEEKAEKAIG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC IEVNKNLTKSKLEAKEKKSVKAGDIEVNKKLTKSKLEAKEKKSVKAEDIEVNKEAKKSKS CCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHH ELIKEKSDKTEGI HHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA