Click here to switch to the map view.

The map label for this gene is yfcA [C]

Identifier: 123966289

GI number: 123966289

Start: 942710

End: 943501

Strand: Reverse

Name: yfcA [C]

Synonym: P9515_10561

Alternate gene names: 123966289

Gene position: 943501-942710 (Counterclockwise)

Preceding gene: 123966291

Following gene: 123966288

Centisome position: 55.36

GC content: 29.29

Gene sequence:

>792_bases
TTGCAAACCACTAACGAATTTTATTTTTATAATAATGTTTTAATATTTTTAATTTCTTTTTTCTCTAATACATTTTCGGC
AATTTCTGGAGGTGGTGCGGGATTAATTCAATTACCTGCTTTACTATTATTGGGATTACCTTATTATCAAGCTCTTGCTA
CTCACAAAGTTGCCACGGTCGCTTTGGGATTAGGTGGATCTATAAGGAATTTTAAATCTATTAAAAATGATATTTATGTT
TTATGGCAAATACTATTTTTTGGAACTCCTGGAGTTATTTTGGGATCATCTATTGTGAATTACCTTTCTGAGGAAATTCT
GTACTTAATCTTAGGACTTTTTTCAATAATCTTAGCTATATACTCATTTCGTAAACCTAGTTTTGGGTTGTATTCAGTAA
ATAATAGAATCATTTCCCACTTAAAGTTTAAATTCATTATACCTATTTTTTTAATTGGAATACTAAATGGTTCTGTTTCT
TCAGGAACTGGTTTATTAGTAACTATCTTATTAATTAAAACTTTTCAGATGGACTTTCTTAGAGCAGTTAGTTTAACCTT
TTTTACAGTAGGTATTTTCTGGAATGCAATAGGAGCATTTTTTCTAAGCAGGATTGGTTCTATTCCAACGAATTTATTAG
TAATTCTTATATTAGGTTCTTTTTCTGGGGGATATTTTGGCGCTCATTTATCAAATTTAAAAGGGAACAAACTCATTAAA
AATACCTTTACTATTGTATGCCTGCTTGTTGGAGTTAGTTTGTTGTTAAAGTCAATTGCTAACTTGAAATAA

Upstream 100 bases:

>100_bases
ATCTGTGGTATTTAAGAAATATGTAATGTTAATAACATGTAATTGATTAAATTTTTTAAAAAAGTAAGAATTATATTAAC
TGATAACTACTTCTACATAG

Downstream 100 bases:

>100_bases
GCCACTTTTGGCATAAGAAAAACCTTTTTTAGCTTAAAAATGCCTACTCCCTCTTTTGAATTTAACAGTGAAAGCTTAAT
TTTAAGAACAATTTTAAAAT

Product: permease

Products: NA

Alternate protein names: ORF9 [H]

Number of amino acids: Translated: 263; Mature: 263

Protein sequence:

>263_residues
MQTTNEFYFYNNVLIFLISFFSNTFSAISGGGAGLIQLPALLLLGLPYYQALATHKVATVALGLGGSIRNFKSIKNDIYV
LWQILFFGTPGVILGSSIVNYLSEEILYLILGLFSIILAIYSFRKPSFGLYSVNNRIISHLKFKFIIPIFLIGILNGSVS
SGTGLLVTILLIKTFQMDFLRAVSLTFFTVGIFWNAIGAFFLSRIGSIPTNLLVILILGSFSGGYFGAHLSNLKGNKLIK
NTFTIVCLLVGVSLLLKSIANLK

Sequences:

>Translated_263_residues
MQTTNEFYFYNNVLIFLISFFSNTFSAISGGGAGLIQLPALLLLGLPYYQALATHKVATVALGLGGSIRNFKSIKNDIYV
LWQILFFGTPGVILGSSIVNYLSEEILYLILGLFSIILAIYSFRKPSFGLYSVNNRIISHLKFKFIIPIFLIGILNGSVS
SGTGLLVTILLIKTFQMDFLRAVSLTFFTVGIFWNAIGAFFLSRIGSIPTNLLVILILGSFSGGYFGAHLSNLKGNKLIK
NTFTIVCLLVGVSLLLKSIANLK
>Mature_263_residues
MQTTNEFYFYNNVLIFLISFFSNTFSAISGGGAGLIQLPALLLLGLPYYQALATHKVATVALGLGGSIRNFKSIKNDIYV
LWQILFFGTPGVILGSSIVNYLSEEILYLILGLFSIILAIYSFRKPSFGLYSVNNRIISHLKFKFIIPIFLIGILNGSVS
SGTGLLVTILLIKTFQMDFLRAVSLTFFTVGIFWNAIGAFFLSRIGSIPTNLLVILILGSFSGGYFGAHLSNLKGNKLIK
NTFTIVCLLVGVSLLLKSIANLK

Specific function: Unknown

COG id: COG0730

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cell membrane (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0721 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002781 [H]

Pfam domain/function: PF01925 DUF81 [H]

EC number: NA

Molecular weight: Translated: 28778; Mature: 28778

Theoretical pI: Translated: 10.39; Mature: 10.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQTTNEFYFYNNVLIFLISFFSNTFSAISGGGAGLIQLPALLLLGLPYYQALATHKVATV
CCCCCCEEHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHH
ALGLGGSIRNFKSIKNDIYVLWQILFFGTPGVILGSSIVNYLSEEILYLILGLFSIILAI
HHCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YSFRKPSFGLYSVNNRIISHLKFKFIIPIFLIGILNGSVSSGTGLLVTILLIKTFQMDFL
HHCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH
RAVSLTFFTVGIFWNAIGAFFLSRIGSIPTNLLVILILGSFSGGYFGAHLSNLKGNKLIK
HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHCCCCCHHHH
NTFTIVCLLVGVSLLLKSIANLK
HHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MQTTNEFYFYNNVLIFLISFFSNTFSAISGGGAGLIQLPALLLLGLPYYQALATHKVATV
CCCCCCEEHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHH
ALGLGGSIRNFKSIKNDIYVLWQILFFGTPGVILGSSIVNYLSEEILYLILGLFSIILAI
HHCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YSFRKPSFGLYSVNNRIISHLKFKFIIPIFLIGILNGSVSSGTGLLVTILLIKTFQMDFL
HHCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH
RAVSLTFFTVGIFWNAIGAFFLSRIGSIPTNLLVILILGSFSGGYFGAHLSNLKGNKLIK
HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHCCCCCHHHH
NTFTIVCLLVGVSLLLKSIANLK
HHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1655697 [H]