| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
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The map label for this gene is 123966286
Identifier: 123966286
GI number: 123966286
Start: 940903
End: 941736
Strand: Direct
Name: 123966286
Synonym: P9515_10531
Alternate gene names: NA
Gene position: 940903-941736 (Clockwise)
Preceding gene: 123966285
Following gene: 123966290
Centisome position: 55.21
GC content: 25.9
Gene sequence:
>834_bases TTGGAATCTTGGAACAAAAAAATATACCGCAATGGGGTCATGAATATAAAAAAATATTTAAAAGTTTATTCATTATTTTT ATATACTTCCATAGCGTCAGAATTGGAATACAAGACTAACGTAATCATTGACTTCATTACTGCAATTCTAAGCTTGTTAG GCAGCTTATTTCTATTAACAATATTTTTCCAAAATACGGATAATATCGGTGGATGGAATTTTGAACAAGCTTTAATTATT CAAGGGATTTATACAATCCTAAATGGAATTACTAATACATGGTTCAATCCTAATCTTAAAGAAATAGTTAATTATATTAG AGAAGGAACCTTAGATTTTGTACTTCTTAAACCTATAGATAGTCAATTTATTATTTCCTTAAAAAAAATAGCACCATCCG GATTTTTAGAAATAATTTTAGGTATTGCCTTACTATTTTATTGCATAATTATTAATCAAATAAATATAAATTTAGTTTTT TTATTTTTATGCTTCACAACATTATTTTGTTCTATTGGAATTTTGTATAGCTTATGGTTTTTAATATCAACAACAACAAT TTGGTTTGTAAAGACATGGAATGCCACAGAAGTATTACGTTCTTTTCTTTATATAGGAAGATTTCCTTTAAACTCATTTT CATTTTCTTTAAGGATATTCTTTAGTATTTTTATTCCAATAGCATTTATAACAACAATCCCTTCTGAAGTTTTTCTGGGA ATAGCCCAACTTTGGGAAATACTACTAGAACTAATTATTTCTTTTATATTTTTTATAGTTTCTAGAAGATTTTGGTTATT TGCTCTGAAATATTACACATCAGCTTCTAGTTAA
Upstream 100 bases:
>100_bases TTCCAGCAAATTTATTATCTGGAAACGATACAAATGCAATTTCTGGATTTGTTATGCAGATAATTTGGATTCTATTTCTT TTCCCTATATTTAAAAGGAC
Downstream 100 bases:
>100_bases TTTTTATTTGACAATTTCTCTACATAAATCCCAAATTTTTTGCCTGTTGTTTTGATTAGTTAATTTGGATAATTTCTTGA AATTAGTTGATGACTTTTCA
Product: membrane protein, multidrug efflux associated
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 277; Mature: 277
Protein sequence:
>277_residues MESWNKKIYRNGVMNIKKYLKVYSLFLYTSIASELEYKTNVIIDFITAILSLLGSLFLLTIFFQNTDNIGGWNFEQALII QGIYTILNGITNTWFNPNLKEIVNYIREGTLDFVLLKPIDSQFIISLKKIAPSGFLEIILGIALLFYCIIINQININLVF LFLCFTTLFCSIGILYSLWFLISTTTIWFVKTWNATEVLRSFLYIGRFPLNSFSFSLRIFFSIFIPIAFITTIPSEVFLG IAQLWEILLELIISFIFFIVSRRFWLFALKYYTSASS
Sequences:
>Translated_277_residues MESWNKKIYRNGVMNIKKYLKVYSLFLYTSIASELEYKTNVIIDFITAILSLLGSLFLLTIFFQNTDNIGGWNFEQALII QGIYTILNGITNTWFNPNLKEIVNYIREGTLDFVLLKPIDSQFIISLKKIAPSGFLEIILGIALLFYCIIINQININLVF LFLCFTTLFCSIGILYSLWFLISTTTIWFVKTWNATEVLRSFLYIGRFPLNSFSFSLRIFFSIFIPIAFITTIPSEVFLG IAQLWEILLELIISFIFFIVSRRFWLFALKYYTSASS >Mature_277_residues MESWNKKIYRNGVMNIKKYLKVYSLFLYTSIASELEYKTNVIIDFITAILSLLGSLFLLTIFFQNTDNIGGWNFEQALII QGIYTILNGITNTWFNPNLKEIVNYIREGTLDFVLLKPIDSQFIISLKKIAPSGFLEIILGIALLFYCIIINQININLVF LFLCFTTLFCSIGILYSLWFLISTTTIWFVKTWNATEVLRSFLYIGRFPLNSFSFSLRIFFSIFIPIAFITTIPSEVFLG IAQLWEILLELIISFIFFIVSRRFWLFALKYYTSASS
Specific function: Unknown
COG id: COG3694
COG function: function code R; ABC-type uncharacterized transport system, permease component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32220; Mature: 32220
Theoretical pI: Translated: 8.98; Mature: 8.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MESWNKKIYRNGVMNIKKYLKVYSLFLYTSIASELEYKTNVIIDFITAILSLLGSLFLLT CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IFFQNTDNIGGWNFEQALIIQGIYTILNGITNTWFNPNLKEIVNYIREGTLDFVLLKPID HHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCEEEECCCC SQFIISLKKIAPSGFLEIILGIALLFYCIIINQININLVFLFLCFTTLFCSIGILYSLWF HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH LISTTTIWFVKTWNATEVLRSFLYIGRFPLNSFSFSLRIFFSIFIPIAFITTIPSEVFLG HHHHHHHEEEEECCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHH IAQLWEILLELIISFIFFIVSRRFWLFALKYYTSASS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MESWNKKIYRNGVMNIKKYLKVYSLFLYTSIASELEYKTNVIIDFITAILSLLGSLFLLT CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IFFQNTDNIGGWNFEQALIIQGIYTILNGITNTWFNPNLKEIVNYIREGTLDFVLLKPID HHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCEEEECCCC SQFIISLKKIAPSGFLEIILGIALLFYCIIINQININLVFLFLCFTTLFCSIGILYSLWF HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH LISTTTIWFVKTWNATEVLRSFLYIGRFPLNSFSFSLRIFFSIFIPIAFITTIPSEVFLG HHHHHHHEEEEECCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHH IAQLWEILLELIISFIFFIVSRRFWLFALKYYTSASS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA