Definition Prochlorococcus marinus str. MIT 9515, complete genome.
Accession NC_008817
Length 1,704,176

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The map label for this gene is 123966286

Identifier: 123966286

GI number: 123966286

Start: 940903

End: 941736

Strand: Direct

Name: 123966286

Synonym: P9515_10531

Alternate gene names: NA

Gene position: 940903-941736 (Clockwise)

Preceding gene: 123966285

Following gene: 123966290

Centisome position: 55.21

GC content: 25.9

Gene sequence:

>834_bases
TTGGAATCTTGGAACAAAAAAATATACCGCAATGGGGTCATGAATATAAAAAAATATTTAAAAGTTTATTCATTATTTTT
ATATACTTCCATAGCGTCAGAATTGGAATACAAGACTAACGTAATCATTGACTTCATTACTGCAATTCTAAGCTTGTTAG
GCAGCTTATTTCTATTAACAATATTTTTCCAAAATACGGATAATATCGGTGGATGGAATTTTGAACAAGCTTTAATTATT
CAAGGGATTTATACAATCCTAAATGGAATTACTAATACATGGTTCAATCCTAATCTTAAAGAAATAGTTAATTATATTAG
AGAAGGAACCTTAGATTTTGTACTTCTTAAACCTATAGATAGTCAATTTATTATTTCCTTAAAAAAAATAGCACCATCCG
GATTTTTAGAAATAATTTTAGGTATTGCCTTACTATTTTATTGCATAATTATTAATCAAATAAATATAAATTTAGTTTTT
TTATTTTTATGCTTCACAACATTATTTTGTTCTATTGGAATTTTGTATAGCTTATGGTTTTTAATATCAACAACAACAAT
TTGGTTTGTAAAGACATGGAATGCCACAGAAGTATTACGTTCTTTTCTTTATATAGGAAGATTTCCTTTAAACTCATTTT
CATTTTCTTTAAGGATATTCTTTAGTATTTTTATTCCAATAGCATTTATAACAACAATCCCTTCTGAAGTTTTTCTGGGA
ATAGCCCAACTTTGGGAAATACTACTAGAACTAATTATTTCTTTTATATTTTTTATAGTTTCTAGAAGATTTTGGTTATT
TGCTCTGAAATATTACACATCAGCTTCTAGTTAA

Upstream 100 bases:

>100_bases
TTCCAGCAAATTTATTATCTGGAAACGATACAAATGCAATTTCTGGATTTGTTATGCAGATAATTTGGATTCTATTTCTT
TTCCCTATATTTAAAAGGAC

Downstream 100 bases:

>100_bases
TTTTTATTTGACAATTTCTCTACATAAATCCCAAATTTTTTGCCTGTTGTTTTGATTAGTTAATTTGGATAATTTCTTGA
AATTAGTTGATGACTTTTCA

Product: membrane protein, multidrug efflux associated

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 277; Mature: 277

Protein sequence:

>277_residues
MESWNKKIYRNGVMNIKKYLKVYSLFLYTSIASELEYKTNVIIDFITAILSLLGSLFLLTIFFQNTDNIGGWNFEQALII
QGIYTILNGITNTWFNPNLKEIVNYIREGTLDFVLLKPIDSQFIISLKKIAPSGFLEIILGIALLFYCIIINQININLVF
LFLCFTTLFCSIGILYSLWFLISTTTIWFVKTWNATEVLRSFLYIGRFPLNSFSFSLRIFFSIFIPIAFITTIPSEVFLG
IAQLWEILLELIISFIFFIVSRRFWLFALKYYTSASS

Sequences:

>Translated_277_residues
MESWNKKIYRNGVMNIKKYLKVYSLFLYTSIASELEYKTNVIIDFITAILSLLGSLFLLTIFFQNTDNIGGWNFEQALII
QGIYTILNGITNTWFNPNLKEIVNYIREGTLDFVLLKPIDSQFIISLKKIAPSGFLEIILGIALLFYCIIINQININLVF
LFLCFTTLFCSIGILYSLWFLISTTTIWFVKTWNATEVLRSFLYIGRFPLNSFSFSLRIFFSIFIPIAFITTIPSEVFLG
IAQLWEILLELIISFIFFIVSRRFWLFALKYYTSASS
>Mature_277_residues
MESWNKKIYRNGVMNIKKYLKVYSLFLYTSIASELEYKTNVIIDFITAILSLLGSLFLLTIFFQNTDNIGGWNFEQALII
QGIYTILNGITNTWFNPNLKEIVNYIREGTLDFVLLKPIDSQFIISLKKIAPSGFLEIILGIALLFYCIIINQININLVF
LFLCFTTLFCSIGILYSLWFLISTTTIWFVKTWNATEVLRSFLYIGRFPLNSFSFSLRIFFSIFIPIAFITTIPSEVFLG
IAQLWEILLELIISFIFFIVSRRFWLFALKYYTSASS

Specific function: Unknown

COG id: COG3694

COG function: function code R; ABC-type uncharacterized transport system, permease component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32220; Mature: 32220

Theoretical pI: Translated: 8.98; Mature: 8.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MESWNKKIYRNGVMNIKKYLKVYSLFLYTSIASELEYKTNVIIDFITAILSLLGSLFLLT
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IFFQNTDNIGGWNFEQALIIQGIYTILNGITNTWFNPNLKEIVNYIREGTLDFVLLKPID
HHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCEEEECCCC
SQFIISLKKIAPSGFLEIILGIALLFYCIIINQININLVFLFLCFTTLFCSIGILYSLWF
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LISTTTIWFVKTWNATEVLRSFLYIGRFPLNSFSFSLRIFFSIFIPIAFITTIPSEVFLG
HHHHHHHEEEEECCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHH
IAQLWEILLELIISFIFFIVSRRFWLFALKYYTSASS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MESWNKKIYRNGVMNIKKYLKVYSLFLYTSIASELEYKTNVIIDFITAILSLLGSLFLLT
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IFFQNTDNIGGWNFEQALIIQGIYTILNGITNTWFNPNLKEIVNYIREGTLDFVLLKPID
HHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCEEEECCCC
SQFIISLKKIAPSGFLEIILGIALLFYCIIINQININLVFLFLCFTTLFCSIGILYSLWF
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LISTTTIWFVKTWNATEVLRSFLYIGRFPLNSFSFSLRIFFSIFIPIAFITTIPSEVFLG
HHHHHHHEEEEECCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHH
IAQLWEILLELIISFIFFIVSRRFWLFALKYYTSASS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA