| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
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The map label for this gene is natA [H]
Identifier: 123966284
GI number: 123966284
Start: 939164
End: 940153
Strand: Direct
Name: natA [H]
Synonym: P9515_10511
Alternate gene names: 123966284
Gene position: 939164-940153 (Clockwise)
Preceding gene: 123966283
Following gene: 123966285
Centisome position: 55.11
GC content: 28.28
Gene sequence:
>990_bases ATGAAAGAGAATATTATTCAGGTTAGAAATTTATCAAAATCATTTGAGATATCCTCAAAAGATCATGGCATTAAAGGAAC TCTTAAGCATTTTTTCAAAAGGGAAACAAAAAGTATTGAGGTTATAAAAAATATAAATTTCGAAATAAATAAAGGAGAAA TAGTAGGTTTTCTTGGAGCTAATGGTGCGGGGAAAACAACTATTCTTAAAATGCTCTGTGGTTTGATATACCCGAGTAGA GGTAAATTGTCAGTTGCAGGTTATGCACCATTTAAAAGAAGGACTAATTTTTTGAAAAATATAACTTTGATAATGGGACA AAAACAACAACTAATTTGGGATCTTCCTCCTATTGAATCTTTTTACTTAAATGCAGCAATTTATGACATAGAAAAATTTG AAGCCAAAAGAAGAATTAAAAAGTTATCAGATATGCTTGAGATTGAACAAGAGCTTAATATACCTGTCCGAAAATTATCT TTAGGTCAAAGAATGAAGGCAGAATTATTAGCAGCTTTAATTCATAAACCAAATATTTTATTTTTAGATGAACCTACACT AGGTCTAGATATTAATGCTCAAAGAAATCTCAGAAAATTTCTACAAATTTATAATAAAGAAACAGATGCAACAATTTGCC TAACTAGTCACTATATGAAAGATATTACATCTTTATGCAAGAGGGTAATCTGTATTCACGAAGGATGTATTACATATGAT GGGAAGCTGGATAAATTATTAAAAAAATTATCGCCTGTCAAGGATATCCTAATTATTTGTAAAACTGAAAAAGAGGCTAG AGAATTAAGCAATTCAGGATTTACCATAAAAAACAGGAATCAAAAAGAAATTACAATAACAATTAAGAAAGATTCTATTA AATCTTCTTTAAATGAGATTCTTAAAAAATTTGATATAGAAGATCTCTATATAAACGAGCCTCCAGTTGATGAAATAATT GGAAATATCCTTGTAAAGGAAAAAGTATAA
Upstream 100 bases:
>100_bases AAAGATATTTTTTAATTTAATATGATTATTAAATAAAAATATACGTTATCGATCTTTAAAATTTATACTATCCAAAAGAT TAAATTAATATTTTAATAAT
Downstream 100 bases:
>100_bases ATGTTTAATTTAAATAAAAATAAACTCATAACTTTATTGAAAGTACAGTACTCAAATATGTTGGAATACAGAGTAGAAAT AGCTTTATGGGCAATATCGG
Product: putative multidrug efflux ABC transporter
Products: NA
Alternate protein names: Na(+) ABC transporter [H]
Number of amino acids: Translated: 329; Mature: 329
Protein sequence:
>329_residues MKENIIQVRNLSKSFEISSKDHGIKGTLKHFFKRETKSIEVIKNINFEINKGEIVGFLGANGAGKTTILKMLCGLIYPSR GKLSVAGYAPFKRRTNFLKNITLIMGQKQQLIWDLPPIESFYLNAAIYDIEKFEAKRRIKKLSDMLEIEQELNIPVRKLS LGQRMKAELLAALIHKPNILFLDEPTLGLDINAQRNLRKFLQIYNKETDATICLTSHYMKDITSLCKRVICIHEGCITYD GKLDKLLKKLSPVKDILIICKTEKEARELSNSGFTIKNRNQKEITITIKKDSIKSSLNEILKKFDIEDLYINEPPVDEII GNILVKEKV
Sequences:
>Translated_329_residues MKENIIQVRNLSKSFEISSKDHGIKGTLKHFFKRETKSIEVIKNINFEINKGEIVGFLGANGAGKTTILKMLCGLIYPSR GKLSVAGYAPFKRRTNFLKNITLIMGQKQQLIWDLPPIESFYLNAAIYDIEKFEAKRRIKKLSDMLEIEQELNIPVRKLS LGQRMKAELLAALIHKPNILFLDEPTLGLDINAQRNLRKFLQIYNKETDATICLTSHYMKDITSLCKRVICIHEGCITYD GKLDKLLKKLSPVKDILIICKTEKEARELSNSGFTIKNRNQKEITITIKKDSIKSSLNEILKKFDIEDLYINEPPVDEII GNILVKEKV >Mature_329_residues MKENIIQVRNLSKSFEISSKDHGIKGTLKHFFKRETKSIEVIKNINFEINKGEIVGFLGANGAGKTTILKMLCGLIYPSR GKLSVAGYAPFKRRTNFLKNITLIMGQKQQLIWDLPPIESFYLNAAIYDIEKFEAKRRIKKLSDMLEIEQELNIPVRKLS LGQRMKAELLAALIHKPNILFLDEPTLGLDINAQRNLRKFLQIYNKETDATICLTSHYMKDITSLCKRVICIHEGCITYD GKLDKLLKKLSPVKDILIICKTEKEARELSNSGFTIKNRNQKEITITIKKDSIKSSLNEILKKFDIEDLYINEPPVDEII GNILVKEKV
Specific function: Involved in ATP-dependent electrogenic sodium extrusion [H]
COG id: COG4586
COG function: function code R; ABC-type uncharacterized transport system, ATPase component
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transporter domain [H]
Homologues:
Organism=Homo sapiens, GI27436953, Length=243, Percent_Identity=27.5720164609054, Blast_Score=108, Evalue=5e-24, Organism=Homo sapiens, GI116734710, Length=230, Percent_Identity=30, Blast_Score=107, Evalue=2e-23, Organism=Homo sapiens, GI153792144, Length=227, Percent_Identity=30.8370044052863, Blast_Score=106, Evalue=3e-23, Organism=Homo sapiens, GI27477115, Length=253, Percent_Identity=28.8537549407115, Blast_Score=106, Evalue=4e-23, Organism=Homo sapiens, GI6005701, Length=248, Percent_Identity=28.6290322580645, Blast_Score=102, Evalue=7e-22, Organism=Homo sapiens, GI27262624, Length=299, Percent_Identity=28.0936454849498, Blast_Score=99, Evalue=5e-21, Organism=Homo sapiens, GI27262626, Length=299, Percent_Identity=28.0936454849498, Blast_Score=99, Evalue=5e-21, Organism=Homo sapiens, GI27881501, Length=218, Percent_Identity=32.5688073394495, Blast_Score=94, Evalue=1e-19, Organism=Homo sapiens, GI30795238, Length=218, Percent_Identity=32.5688073394495, Blast_Score=94, Evalue=2e-19, Organism=Homo sapiens, GI45446740, Length=317, Percent_Identity=25.8675078864353, Blast_Score=92, Evalue=7e-19, Organism=Homo sapiens, GI47078218, Length=317, Percent_Identity=25.8675078864353, Blast_Score=92, Evalue=7e-19, Organism=Homo sapiens, GI31657092, Length=213, Percent_Identity=30.0469483568075, Blast_Score=77, Evalue=3e-14, Organism=Homo sapiens, GI105990541, Length=301, Percent_Identity=24.9169435215947, Blast_Score=73, Evalue=3e-13, Organism=Homo sapiens, GI150417984, Length=190, Percent_Identity=30, Blast_Score=72, Evalue=8e-13, Organism=Homo sapiens, GI46592956, Length=223, Percent_Identity=25.1121076233184, Blast_Score=72, Evalue=1e-12, Organism=Homo sapiens, GI46592915, Length=223, Percent_Identity=25.1121076233184, Blast_Score=71, Evalue=1e-12, Organism=Homo sapiens, GI46592964, Length=223, Percent_Identity=25.1121076233184, Blast_Score=71, Evalue=1e-12, Organism=Homo sapiens, GI46592971, Length=223, Percent_Identity=25.1121076233184, Blast_Score=71, Evalue=1e-12, Organism=Homo sapiens, GI46592978, Length=223, Percent_Identity=25.1121076233184, Blast_Score=71, Evalue=1e-12, Organism=Homo sapiens, GI46592898, Length=223, Percent_Identity=25.1121076233184, Blast_Score=71, Evalue=1e-12, Organism=Homo sapiens, GI21536376, Length=187, Percent_Identity=26.2032085561497, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI9961250, Length=242, Percent_Identity=23.5537190082645, Blast_Score=69, Evalue=5e-12, Organism=Homo sapiens, GI4505771, Length=242, Percent_Identity=23.5537190082645, Blast_Score=69, Evalue=5e-12, Organism=Homo sapiens, GI9961252, Length=242, Percent_Identity=23.5537190082645, Blast_Score=69, Evalue=7e-12, Organism=Homo sapiens, GI42741659, Length=306, Percent_Identity=24.1830065359477, Blast_Score=67, Evalue=2e-11, Organism=Escherichia coli, GI87081782, Length=246, Percent_Identity=28.8617886178862, Blast_Score=110, Evalue=1e-25, Organism=Escherichia coli, GI1786319, Length=227, Percent_Identity=29.5154185022026, Blast_Score=109, Evalue=3e-25, Organism=Escherichia coli, GI48994943, Length=212, Percent_Identity=30.6603773584906, Blast_Score=109, Evalue=3e-25, Organism=Escherichia coli, GI87081709, Length=248, Percent_Identity=27.4193548387097, Blast_Score=94, Evalue=1e-20, Organism=Escherichia coli, GI1788165, Length=201, Percent_Identity=28.3582089552239, Blast_Score=85, Evalue=5e-18, Organism=Escherichia coli, GI1787547, Length=270, Percent_Identity=26.2962962962963, Blast_Score=83, Evalue=2e-17, Organism=Escherichia coli, GI1789873, Length=214, Percent_Identity=23.8317757009346, Blast_Score=82, Evalue=5e-17, Organism=Escherichia coli, GI1789593, Length=223, Percent_Identity=23.3183856502242, Blast_Score=80, Evalue=2e-16, Organism=Escherichia coli, GI1786398, Length=208, Percent_Identity=26.9230769230769, Blast_Score=80, Evalue=2e-16, Organism=Escherichia coli, GI1787164, Length=204, Percent_Identity=27.4509803921569, Blast_Score=79, Evalue=3e-16, Organism=Escherichia coli, GI1787041, Length=254, Percent_Identity=26.3779527559055, Blast_Score=78, Evalue=7e-16, Organism=Escherichia coli, GI1786703, Length=236, Percent_Identity=25.4237288135593, Blast_Score=75, Evalue=5e-15, Organism=Escherichia coli, GI1790467, Length=207, Percent_Identity=25.1207729468599, Blast_Score=75, Evalue=6e-15, Organism=Escherichia coli, GI1790190, Length=208, Percent_Identity=23.5576923076923, Blast_Score=75, Evalue=7e-15, Organism=Escherichia coli, GI1786803, Length=210, Percent_Identity=27.6190476190476, Blast_Score=75, Evalue=8e-15, Organism=Escherichia coli, GI1788210, Length=206, Percent_Identity=26.6990291262136, Blast_Score=74, Evalue=1e-14, Organism=Escherichia coli, GI1787370, Length=206, Percent_Identity=23.3009708737864, Blast_Score=74, Evalue=2e-14, Organism=Escherichia coli, GI1787792, Length=213, Percent_Identity=25.8215962441315, Blast_Score=73, Evalue=3e-14, Organism=Escherichia coli, GI87081791, Length=235, Percent_Identity=23.4042553191489, Blast_Score=73, Evalue=3e-14, Organism=Escherichia coli, GI48994883, Length=245, Percent_Identity=23.6734693877551, Blast_Score=73, Evalue=3e-14, Organism=Escherichia coli, GI1786253, Length=222, Percent_Identity=25.6756756756757, Blast_Score=72, Evalue=3e-14, Organism=Escherichia coli, GI1789991, Length=214, Percent_Identity=27.5700934579439, Blast_Score=72, Evalue=4e-14, Organism=Escherichia coli, GI1789864, Length=225, Percent_Identity=24, Blast_Score=72, Evalue=4e-14, Organism=Escherichia coli, GI1787759, Length=248, Percent_Identity=24.1935483870968, Blast_Score=70, Evalue=2e-13, Organism=Escherichia coli, GI87082267, Length=205, Percent_Identity=25.3658536585366, Blast_Score=69, Evalue=3e-13, Organism=Escherichia coli, GI1789891, Length=228, Percent_Identity=24.5614035087719, Blast_Score=69, Evalue=4e-13, Organism=Escherichia coli, GI87081834, Length=214, Percent_Identity=22.4299065420561, Blast_Score=68, Evalue=7e-13, Organism=Escherichia coli, GI1789751, Length=279, Percent_Identity=24.7311827956989, Blast_Score=68, Evalue=7e-13, Organism=Escherichia coli, GI145693107, Length=240, Percent_Identity=22.0833333333333, Blast_Score=68, Evalue=1e-12, Organism=Escherichia coli, GI1788506, Length=254, Percent_Identity=26.3779527559055, Blast_Score=67, Evalue=1e-12, Organism=Escherichia coli, GI1787029, Length=237, Percent_Identity=25.7383966244726, Blast_Score=67, Evalue=2e-12, Organism=Escherichia coli, GI1790525, Length=211, Percent_Identity=24.1706161137441, Blast_Score=65, Evalue=6e-12, Organism=Escherichia coli, GI48995001, Length=216, Percent_Identity=20.8333333333333, Blast_Score=65, Evalue=6e-12, Organism=Escherichia coli, GI1788472, Length=206, Percent_Identity=25.7281553398058, Blast_Score=64, Evalue=2e-11, Organism=Escherichia coli, GI1787105, Length=214, Percent_Identity=23.8317757009346, Blast_Score=63, Evalue=2e-11, Organism=Escherichia coli, GI87082268, Length=212, Percent_Identity=26.4150943396226, Blast_Score=63, Evalue=2e-11, Organism=Escherichia coli, GI1787089, Length=215, Percent_Identity=25.5813953488372, Blast_Score=63, Evalue=3e-11, Organism=Escherichia coli, GI1787712, Length=218, Percent_Identity=23.8532110091743, Blast_Score=63, Evalue=3e-11, Organism=Escherichia coli, GI1787143, Length=222, Percent_Identity=23.8738738738739, Blast_Score=62, Evalue=6e-11, Organism=Caenorhabditis elegans, GI115533608, Length=348, Percent_Identity=24.7126436781609, Blast_Score=99, Evalue=4e-21, Organism=Caenorhabditis elegans, GI71983516, Length=211, Percent_Identity=27.9620853080569, Blast_Score=83, Evalue=2e-16, Organism=Caenorhabditis elegans, GI71983510, Length=211, Percent_Identity=27.9620853080569, Blast_Score=83, Evalue=2e-16, Organism=Caenorhabditis elegans, GI71983523, Length=211, Percent_Identity=27.9620853080569, Blast_Score=83, Evalue=2e-16, Organism=Caenorhabditis elegans, GI17565586, Length=277, Percent_Identity=24.187725631769, Blast_Score=80, Evalue=1e-15, Organism=Caenorhabditis elegans, GI17555318, Length=213, Percent_Identity=25.3521126760563, Blast_Score=75, Evalue=6e-14, Organism=Caenorhabditis elegans, GI17569143, Length=264, Percent_Identity=24.2424242424242, Blast_Score=72, Evalue=5e-13, Organism=Caenorhabditis elegans, GI71988343, Length=201, Percent_Identity=28.8557213930348, Blast_Score=68, Evalue=8e-12, Organism=Caenorhabditis elegans, GI17567243, Length=291, Percent_Identity=25.085910652921, Blast_Score=65, Evalue=5e-11, Organism=Caenorhabditis elegans, GI17569145, Length=216, Percent_Identity=24.0740740740741, Blast_Score=65, Evalue=6e-11, Organism=Caenorhabditis elegans, GI17510237, Length=221, Percent_Identity=22.6244343891403, Blast_Score=64, Evalue=9e-11, Organism=Saccharomyces cerevisiae, GI6320874, Length=232, Percent_Identity=27.5862068965517, Blast_Score=65, Evalue=1e-11, Organism=Drosophila melanogaster, GI24666092, Length=261, Percent_Identity=27.9693486590038, Blast_Score=99, Evalue=5e-21, Organism=Drosophila melanogaster, GI24650855, Length=198, Percent_Identity=30.3030303030303, Blast_Score=95, Evalue=7e-20, Organism=Drosophila melanogaster, GI24650853, Length=198, Percent_Identity=30.3030303030303, Blast_Score=95, Evalue=7e-20, Organism=Drosophila melanogaster, GI281362751, Length=198, Percent_Identity=30.3030303030303, Blast_Score=93, Evalue=2e-19, Organism=Drosophila melanogaster, GI28571209, Length=315, Percent_Identity=24.1269841269841, Blast_Score=90, Evalue=3e-18, Organism=Drosophila melanogaster, GI24582014, Length=209, Percent_Identity=25.8373205741627, Blast_Score=85, Evalue=7e-17, Organism=Drosophila melanogaster, GI24582012, Length=209, Percent_Identity=25.8373205741627, Blast_Score=85, Evalue=7e-17, Organism=Drosophila melanogaster, GI24643674, Length=226, Percent_Identity=27.4336283185841, Blast_Score=82, Evalue=5e-16, Organism=Drosophila melanogaster, GI221512771, Length=225, Percent_Identity=28, Blast_Score=81, Evalue=1e-15, Organism=Drosophila melanogaster, GI24648314, Length=262, Percent_Identity=25.1908396946565, Blast_Score=74, Evalue=1e-13, Organism=Drosophila melanogaster, GI28574150, Length=222, Percent_Identity=29.2792792792793, Blast_Score=72, Evalue=6e-13, Organism=Drosophila melanogaster, GI28573571, Length=219, Percent_Identity=24.6575342465753, Blast_Score=72, Evalue=6e-13, Organism=Drosophila melanogaster, GI28573573, Length=219, Percent_Identity=24.6575342465753, Blast_Score=71, Evalue=8e-13, Organism=Drosophila melanogaster, GI116007328, Length=222, Percent_Identity=29.2792792792793, Blast_Score=71, Evalue=8e-13, Organism=Drosophila melanogaster, GI85725262, Length=181, Percent_Identity=29.8342541436464, Blast_Score=71, Evalue=1e-12, Organism=Drosophila melanogaster, GI19920532, Length=244, Percent_Identity=23.3606557377049, Blast_Score=70, Evalue=1e-12, Organism=Drosophila melanogaster, GI24580930, Length=244, Percent_Identity=23.3606557377049, Blast_Score=70, Evalue=1e-12, Organism=Drosophila melanogaster, GI24642252, Length=211, Percent_Identity=26.5402843601896, Blast_Score=69, Evalue=3e-12, Organism=Drosophila melanogaster, GI18859989, Length=211, Percent_Identity=26.5402843601896, Blast_Score=69, Evalue=3e-12, Organism=Drosophila melanogaster, GI24641342, Length=263, Percent_Identity=28.5171102661597, Blast_Score=69, Evalue=4e-12, Organism=Drosophila melanogaster, GI24641565, Length=219, Percent_Identity=25.5707762557078, Blast_Score=67, Evalue=2e-11, Organism=Drosophila melanogaster, GI28574744, Length=226, Percent_Identity=28.7610619469027, Blast_Score=65, Evalue=5e-11, Organism=Drosophila melanogaster, GI281363262, Length=234, Percent_Identity=21.7948717948718, Blast_Score=65, Evalue=9e-11, Organism=Drosophila melanogaster, GI24653245, Length=234, Percent_Identity=21.7948717948718, Blast_Score=65, Evalue=9e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR003593 [H]
Pfam domain/function: PF00005 ABC_tran [H]
EC number: NA
Molecular weight: Translated: 37682; Mature: 37682
Theoretical pI: Translated: 9.99; Mature: 9.99
Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKENIIQVRNLSKSFEISSKDHGIKGTLKHFFKRETKSIEVIKNINFEINKGEIVGFLGA CCCCHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEHHCCCCEEECCCCEEEEECC NGAGKTTILKMLCGLIYPSRGKLSVAGYAPFKRRTNFLKNITLIMGQKQQLIWDLPPIES CCCCHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHHEECCCHHHEECCCCHHH FYLNAAIYDIEKFEAKRRIKKLSDMLEIEQELNIPVRKLSLGQRMKAELLAALIHKPNIL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCEE FLDEPTLGLDINAQRNLRKFLQIYNKETDATICLTSHYMKDITSLCKRVICIHEGCITYD EEECCCCCEECCCHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCEEEC GKLDKLLKKLSPVKDILIICKTEKEARELSNSGFTIKNRNQKEITITIKKDSIKSSLNEI CHHHHHHHHHCCHHHEEEEECCCHHHHHHCCCCCEEECCCCEEEEEEEECHHHHHHHHHH LKKFDIEDLYINEPPVDEIIGNILVKEKV HHHCCCCEEEECCCCHHHHHHHHHHCCCC >Mature Secondary Structure MKENIIQVRNLSKSFEISSKDHGIKGTLKHFFKRETKSIEVIKNINFEINKGEIVGFLGA CCCCHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEHHCCCCEEECCCCEEEEECC NGAGKTTILKMLCGLIYPSRGKLSVAGYAPFKRRTNFLKNITLIMGQKQQLIWDLPPIES CCCCHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHHEECCCHHHEECCCCHHH FYLNAAIYDIEKFEAKRRIKKLSDMLEIEQELNIPVRKLSLGQRMKAELLAALIHKPNIL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCEE FLDEPTLGLDINAQRNLRKFLQIYNKETDATICLTSHYMKDITSLCKRVICIHEGCITYD EEECCCCCEECCCHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCEEEC GKLDKLLKKLSPVKDILIICKTEKEARELSNSGFTIKNRNQKEITITIKKDSIKSSLNEI CHHHHHHHHHCCHHHEEEEECCCHHHHHHCCCCCEEECCCCEEEEEEEECHHHHHHHHHH LKKFDIEDLYINEPPVDEIIGNILVKEKV HHHCCCCEEEECCCCHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9106203; 9274031; 9384377 [H]