| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
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The map label for this gene is 123966278
Identifier: 123966278
GI number: 123966278
Start: 936140
End: 937366
Strand: Direct
Name: 123966278
Synonym: P9515_10451
Alternate gene names: NA
Gene position: 936140-937366 (Clockwise)
Preceding gene: 123966271
Following gene: 123966282
Centisome position: 54.93
GC content: 33.01
Gene sequence:
>1227_bases ATGGACTTTCAACAAGGTTTAATCACAACAATACATGAATATGGTGTCACGAAGGATCTACTTAAAGAATTAAATGGAAG TCTAAAGAATAAATCAACTGCAATATTAATTCCTTGTCTTTATGAAGAATTTGAACGTCCTGCCCTAAAAAACATAAAAG AAGTATTAAAAAATCTTACAGGATTAAATGAATTAGTTATAGCTCTTTCTGCAAAAACTATTGATCAGGTAAATTCTGCC AAATCATTTTTTGATTCAATGCCTTTTCCCGTTCATATTCAATGGACAAATTCTCCATCTGTAATTGAACTTTTAAAAAA CCAAGAAAAAAATGGTCTCGAACTACTAGGTACGCCCGGGAAAGGATGGGCTGTATGGCAAGGAATAGGCGTTGCAACAA GAAAATCTGAAGTGGTTGCATTATTTGATGCTGATATAAGAACATTTAGTCCTTTATATCCATCAAGAATGATACTTCCG TTATTAGATGAGTCATATGGAATTTCCTATGTAAAAGCCTTTTACAGCAGATTATCCCTAGAAAATAATCAATTACAAGG AAGAGCAACTAGATTATTTGTGGGACCTCTTTTGGCAAGTTTGGAGCAGTTAGTTGGTAATGGACCATTCTTACAATATT TACAGTCATTTAGATATCCACTGGCTGGTGAGTTCGCATTTACAAAAGATTTGGCAATGAATTTAAGAATTCCTTGTGAC TGGGGTTTAGAAATAGGACTTCTTTCAGAAGTTTATAGAAATGTTAGGACTTCGAAAATAGCTCAAGTGGACCTTGGGTT ATTTGATCATAAGCATAAAACAATAGGATCATCCTCCAAAGAAGGTCTTCAAAAAATGTGTACAGAAATACTTTCTAGTG TTTTGAGAGGATTAATGGAACATCAAGCAGAGACGTTAACGAGCACTCAATTATCTACACTTGAAGTTCTATATAAAAGG GTAGGAGAAGATAGAGTCAAGCAATTTGGATTAGATTCTGCAGTTAATAAGCTTCCATATGATAGACATGAAGAAGAATT ATCAGTTCAAAAATTTGCTAAATTATTAAGACCTGCAACTAAAGGTTATTTATCAAATCCAACAACTCAACAACTTCCTA GTTGGTCAAGAGTCCTATCATGCGAAAATAAACTACAAGAGGATTTAGCGAATGCAGGATCTAAAGAAATAAATTCAACC AAAAAAGAATTAATTAATAAATGTTAA
Upstream 100 bases:
>100_bases TTTACTAAGTTTTACTCTATTAAATTTTTTCTCTGAATCATTTTGCGTCACTTTAAAAAATCATCGAAGTATTAACACTA TTCTGAACATCAAATAGAAC
Downstream 100 bases:
>100_bases ATTAAAAAAAATACTGTGATAACAAATAGATATTATTGATTATTTGAAAATATAAAGTTGATACTTCCAAAAACCTATTG GTGAGAGGTTATATTTTCAC
Product: hypothetical protein
Products: NA
Alternate protein names: Glucosyl-3-Phosphoglycerate Synthase; Glycosyltransferase; Glycosyltransferase-Like Protein; Glycosyl Transferase; Glycosyl Transferase Family 2 Protein; Cell Wall Biogenesis Glycosyltransferase; Glycosyl Transferase Family Protein; Group 2 Family Glycosyl Transferase; Glycosyltransferase Family Protein; Family 2 Glycosyl Transferase Protein; Polypeptide N-Acetylgalactosaminyltransferase; Glycosyl Transferase Group 2 Family; Family 2 Glycosyl Transferase; Glycosyltransferase Group; Cell Wall Biosynthesis Glycosyltransferase; Glycosyl Transferase Group 2 Family Protein
Number of amino acids: Translated: 408; Mature: 408
Protein sequence:
>408_residues MDFQQGLITTIHEYGVTKDLLKELNGSLKNKSTAILIPCLYEEFERPALKNIKEVLKNLTGLNELVIALSAKTIDQVNSA KSFFDSMPFPVHIQWTNSPSVIELLKNQEKNGLELLGTPGKGWAVWQGIGVATRKSEVVALFDADIRTFSPLYPSRMILP LLDESYGISYVKAFYSRLSLENNQLQGRATRLFVGPLLASLEQLVGNGPFLQYLQSFRYPLAGEFAFTKDLAMNLRIPCD WGLEIGLLSEVYRNVRTSKIAQVDLGLFDHKHKTIGSSSKEGLQKMCTEILSSVLRGLMEHQAETLTSTQLSTLEVLYKR VGEDRVKQFGLDSAVNKLPYDRHEEELSVQKFAKLLRPATKGYLSNPTTQQLPSWSRVLSCENKLQEDLANAGSKEINST KKELINKC
Sequences:
>Translated_408_residues MDFQQGLITTIHEYGVTKDLLKELNGSLKNKSTAILIPCLYEEFERPALKNIKEVLKNLTGLNELVIALSAKTIDQVNSA KSFFDSMPFPVHIQWTNSPSVIELLKNQEKNGLELLGTPGKGWAVWQGIGVATRKSEVVALFDADIRTFSPLYPSRMILP LLDESYGISYVKAFYSRLSLENNQLQGRATRLFVGPLLASLEQLVGNGPFLQYLQSFRYPLAGEFAFTKDLAMNLRIPCD WGLEIGLLSEVYRNVRTSKIAQVDLGLFDHKHKTIGSSSKEGLQKMCTEILSSVLRGLMEHQAETLTSTQLSTLEVLYKR VGEDRVKQFGLDSAVNKLPYDRHEEELSVQKFAKLLRPATKGYLSNPTTQQLPSWSRVLSCENKLQEDLANAGSKEINST KKELINKC >Mature_408_residues MDFQQGLITTIHEYGVTKDLLKELNGSLKNKSTAILIPCLYEEFERPALKNIKEVLKNLTGLNELVIALSAKTIDQVNSA KSFFDSMPFPVHIQWTNSPSVIELLKNQEKNGLELLGTPGKGWAVWQGIGVATRKSEVVALFDADIRTFSPLYPSRMILP LLDESYGISYVKAFYSRLSLENNQLQGRATRLFVGPLLASLEQLVGNGPFLQYLQSFRYPLAGEFAFTKDLAMNLRIPCD WGLEIGLLSEVYRNVRTSKIAQVDLGLFDHKHKTIGSSSKEGLQKMCTEILSSVLRGLMEHQAETLTSTQLSTLEVLYKR VGEDRVKQFGLDSAVNKLPYDRHEEELSVQKFAKLLRPATKGYLSNPTTQQLPSWSRVLSCENKLQEDLANAGSKEINST KKELINKC
Specific function: Unknown
COG id: COG0463
COG function: function code M; Glycosyltransferases involved in cell wall biogenesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45778; Mature: 45778
Theoretical pI: Translated: 8.43; Mature: 8.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDFQQGLITTIHEYGVTKDLLKELNGSLKNKSTAILIPCLYEEFERPALKNIKEVLKNLT CCCHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCEEEEEHHHHHHCCHHHHHHHHHHHHHH GLNELVIALSAKTIDQVNSAKSFFDSMPFPVHIQWTNSPSVIELLKNQEKNGLELLGTPG CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHCCCCCCCEEECCCC KGWAVWQGIGVATRKSEVVALFDADIRTFSPLYPSRMILPLLDESYGISYVKAFYSRLSL CCCCCEECCCCEECCCCEEEEEECCHHHCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHCC ENNQLQGRATRLFVGPLLASLEQLVGNGPFLQYLQSFRYPLAGEFAFTKDLAMNLRIPCD CCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCHHHHHHHHHEEECCCC WGLEIGLLSEVYRNVRTSKIAQVDLGLFDHKHKTIGSSSKEGLQKMCTEILSSVLRGLME CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH HQAETLTSTQLSTLEVLYKRVGEDRVKQFGLDSAVNKLPYDRHEEELSVQKFAKLLRPAT HHHHHHHHHHHHHHHHHHHHHCHHHHHHHCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH KGYLSNPTTQQLPSWSRVLSCENKLQEDLANAGSKEINSTKKELINKC HCCCCCCCHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCC >Mature Secondary Structure MDFQQGLITTIHEYGVTKDLLKELNGSLKNKSTAILIPCLYEEFERPALKNIKEVLKNLT CCCHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCEEEEEHHHHHHCCHHHHHHHHHHHHHH GLNELVIALSAKTIDQVNSAKSFFDSMPFPVHIQWTNSPSVIELLKNQEKNGLELLGTPG CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHCCCCCCCEEECCCC KGWAVWQGIGVATRKSEVVALFDADIRTFSPLYPSRMILPLLDESYGISYVKAFYSRLSL CCCCCEECCCCEECCCCEEEEEECCHHHCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHCC ENNQLQGRATRLFVGPLLASLEQLVGNGPFLQYLQSFRYPLAGEFAFTKDLAMNLRIPCD CCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCHHHHHHHHHEEECCCC WGLEIGLLSEVYRNVRTSKIAQVDLGLFDHKHKTIGSSSKEGLQKMCTEILSSVLRGLME CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH HQAETLTSTQLSTLEVLYKRVGEDRVKQFGLDSAVNKLPYDRHEEELSVQKFAKLLRPAT HHHHHHHHHHHHHHHHHHHHHCHHHHHHHCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH KGYLSNPTTQQLPSWSRVLSCENKLQEDLANAGSKEINSTKKELINKC HCCCCCCCHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA