| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
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The map label for this gene is yedP [C]
Identifier: 123966276
GI number: 123966276
Start: 933528
End: 934328
Strand: Reverse
Name: yedP [C]
Synonym: P9515_10431
Alternate gene names: 123966276
Gene position: 934328-933528 (Counterclockwise)
Preceding gene: 123966277
Following gene: 123966275
Centisome position: 54.83
GC content: 29.34
Gene sequence:
>801_bases ATGATTGAAAATTCTTCCTTATGGGTAGTAAGTGACGTAGATGGAACATTAATGGATCATTCTTATGATTTAACTCCAGC AAAAGAAACTATAAAATTACTTCAAGAATTATCTATCCCCGTTATATTATGCACCAGTAAAACTGCTGCGGAAGTTAAGG TTATTAGAAAACAACTTGATTTAACGGATCCTTACATTGTAGAAAATGGAGCAGCCATATATGGTGAATCATTAAACAAA GTAAATGGGGAGATTATTCTTGGAGAGAAATACGAAATTCTGGAAAATATTTTGAATTGTATTTCTAATGAAATCAATTA TAGTTTACAACCACTAAATAATATTACCGACAAAGAGGCAACAGAACTAACTGGTTTAAAAGGTCAATCTCTTGCATTAA TGAGAGATAGACACTGGAGTATGCCATTTTTAAATCCTCCAGAAAACATGGAAGAAGAAATTAATATTCGCTGTAAAAGA TTTAACGTAGAAATTTTCAAAGGTAATAGGATGAGCCATATGTTGTCAGTTAATTCAAATAAGGGAAAAGCAATAAAAGC ACTCAAGAAATACTCAAATAATCAAAATATTAAAGTTATTGGTCTGGGAGATTCTCCTAATGATTTACCTTTATTATTGA ATTCTGATTACAAGATTGTTATTCCTGGCCCTAAAGGTCCAAACATAAAATTATTAGAAAAATTAAAAGATCATGAATTT ACTCTAGCAAGTTATCCAAATGGATTTGGTTGGAAAAGTGAAATAAATAAGTTAATAAATAAATTAATATTGATTAAGTA A
Upstream 100 bases:
>100_bases AATGATGAGAATATGCAGGATTATTTAACATCAAATAAATATAATTCTAATAATATTGAACTTGAACCTTTTCAAGTTAT TTGGCTTGGCTTTTTGATAG
Downstream 100 bases:
>100_bases TGAAAGATTTAAATATTGAATTTCCATTAGATAATTTTGAAAAATTAATTTTTCAAATTGGATGGAGTTCTTTGGATGAA TGGTTTGATTTTTGGAAGCT
Product: mannosyl-3-phosphoglycerate phosphatase
Products: NA
Alternate protein names: MPGP [H]
Number of amino acids: Translated: 266; Mature: 266
Protein sequence:
>266_residues MIENSSLWVVSDVDGTLMDHSYDLTPAKETIKLLQELSIPVILCTSKTAAEVKVIRKQLDLTDPYIVENGAAIYGESLNK VNGEIILGEKYEILENILNCISNEINYSLQPLNNITDKEATELTGLKGQSLALMRDRHWSMPFLNPPENMEEEINIRCKR FNVEIFKGNRMSHMLSVNSNKGKAIKALKKYSNNQNIKVIGLGDSPNDLPLLLNSDYKIVIPGPKGPNIKLLEKLKDHEF TLASYPNGFGWKSEINKLINKLILIK
Sequences:
>Translated_266_residues MIENSSLWVVSDVDGTLMDHSYDLTPAKETIKLLQELSIPVILCTSKTAAEVKVIRKQLDLTDPYIVENGAAIYGESLNK VNGEIILGEKYEILENILNCISNEINYSLQPLNNITDKEATELTGLKGQSLALMRDRHWSMPFLNPPENMEEEINIRCKR FNVEIFKGNRMSHMLSVNSNKGKAIKALKKYSNNQNIKVIGLGDSPNDLPLLLNSDYKIVIPGPKGPNIKLLEKLKDHEF TLASYPNGFGWKSEINKLINKLILIK >Mature_266_residues MIENSSLWVVSDVDGTLMDHSYDLTPAKETIKLLQELSIPVILCTSKTAAEVKVIRKQLDLTDPYIVENGAAIYGESLNK VNGEIILGEKYEILENILNCISNEINYSLQPLNNITDKEATELTGLKGQSLALMRDRHWSMPFLNPPENMEEEINIRCKR FNVEIFKGNRMSHMLSVNSNKGKAIKALKKYSNNQNIKVIGLGDSPNDLPLLLNSDYKIVIPGPKGPNIKLLEKLKDHEF TLASYPNGFGWKSEINKLINKLILIK
Specific function: Unknown
COG id: COG3769
COG function: function code R; Predicted hydrolase (HAD superfamily)
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HAD-like hydrolase superfamily. MPGP family [H]
Homologues:
Organism=Escherichia coli, GI1788265, Length=225, Percent_Identity=33.3333333333333, Blast_Score=117, Evalue=7e-28,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR023214 - InterPro: IPR013200 - InterPro: IPR006379 - InterPro: IPR006381 - InterPro: IPR012815 [H]
Pfam domain/function: PF08282 Hydrolase_3 [H]
EC number: =3.1.3.70 [H]
Molecular weight: Translated: 29951; Mature: 29951
Theoretical pI: Translated: 6.94; Mature: 6.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIENSSLWVVSDVDGTLMDHSYDLTPAKETIKLLQELSIPVILCTSKTAAEVKVIRKQLD CCCCCCEEEEECCCCCEECCCCCCCCHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHC LTDPYIVENGAAIYGESLNKVNGEIILGEKYEILENILNCISNEINYSLQPLNNITDKEA CCCCEEEECCCEEECCCCCCCCCEEEECCHHHHHHHHHHHHHHHCCEEECCCCCCCCCHH TELTGLKGQSLALMRDRHWSMPFLNPPENMEEEINIRCKRFNVEIFKGNRMSHMLSVNSN HHHCCCCCCEEEEEECCCCCCCCCCCCCCCCHHHCEEEEEEEEEEEECCCEEEEEEECCC KGKAIKALKKYSNNQNIKVIGLGDSPNDLPLLLNSDYKIVIPGPKGPNIKLLEKLKDHEF CCHHHHHHHHHCCCCCEEEEECCCCCCCCEEEECCCCEEEECCCCCCCHHHHHHHCCCCE TLASYPNGFGWKSEINKLINKLILIK EEECCCCCCCCHHHHHHHHHHHEECC >Mature Secondary Structure MIENSSLWVVSDVDGTLMDHSYDLTPAKETIKLLQELSIPVILCTSKTAAEVKVIRKQLD CCCCCCEEEEECCCCCEECCCCCCCCHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHC LTDPYIVENGAAIYGESLNKVNGEIILGEKYEILENILNCISNEINYSLQPLNNITDKEA CCCCEEEECCCEEECCCCCCCCCEEEECCHHHHHHHHHHHHHHHCCEEECCCCCCCCCHH TELTGLKGQSLALMRDRHWSMPFLNPPENMEEEINIRCKRFNVEIFKGNRMSHMLSVNSN HHHCCCCCCEEEEEECCCCCCCCCCCCCCCCHHHCEEEEEEEEEEEECCCEEEEEEECCC KGKAIKALKKYSNNQNIKVIGLGDSPNDLPLLLNSDYKIVIPGPKGPNIKLLEKLKDHEF CCHHHHHHHHHCCCCCEEEEECCCCCCCCEEEECCCCEEEECCCCCCCHHHHHHHCCCCE TLASYPNGFGWKSEINKLINKLILIK EEECCCCCCCCHHHHHHHHHHHEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA