| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
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The map label for this gene is msrA [H]
Identifier: 123966271
GI number: 123966271
Start: 929713
End: 930441
Strand: Direct
Name: msrA [H]
Synonym: P9515_10381
Alternate gene names: 123966271
Gene position: 929713-930441 (Clockwise)
Preceding gene: 123966270
Following gene: 123966278
Centisome position: 54.55
GC content: 31.41
Gene sequence:
>729_bases ATGTTTAAATTCCTAAAAAAAATCATGAATAAAAACGAAACAATTTCGGAAAATAAAAATAATTTCCTCCATAGAATACT AAATACAAACATAAGAGAGGAACCTAATTCTCAAGAGGATTCAATAATATTTGGATGCGGGTGTTTCTGGGGGGCTGAAA AATGTTTTTGGAAACTTCCTGGAATCGTTACAACTTCAGTAGGTTATGCGGGAGGAGAGAAGAAAAACCCTACATACTAT GAAGTATGTTCAGGTATTACTGGTCATGCAGAAGTGGTTAAGGTGGTTTGGAATATCAATGAGTTAGATATAAGTGATTT ATTAAAAATGTTTTGGGAATGTCATGATCCAACTCAAAAAAATAGACAAGGTAATGATATGGGAACTCAATATAGATCAA CAATTTACTACACAAATAAAAATAGTAAAGACATAATTAACTTAAGCAAAGAAGCTTATCAAAAAGAGCTTACAGCTAAT AATTTCGGGGAAATCGAAACAGAGATAAAAATGATTGACACTTATTATTATGCAGAAGAATATCACCAGCAATATTTAGC TGTAGAGGGAAGTAGGCAATATTGTTCAGCATCACCAACTAAAGTAAAGTTGGGAAATTTTAATGGCAGCAATTACAGAC TACCGAAAGAAATCTGGGATAATTTTAATTGGGACATAGATAAATGTGTATTGAGATCTAATAATAAACCTATAGAGATT AACAAATGA
Upstream 100 bases:
>100_bases AAAGATTTGATAAAAAGAAAAGGACTATATAAAAAACTTTGGGAAAGAGAAATAGCTACCAATAAAATAGTTAGTTAAAT AAAATTATACTGATATTAAA
Downstream 100 bases:
>100_bases GAGTCATTTATATTTATAGTATTGTTACGGGGCGTAGCGCAGTTTGGTAGCGCACCACTTTGGGGTAGTGGGGGTCGTGG GTTCAAATCCCGCCGTTCCG
Product: peptide methionine sulfoxide reductase
Products: NA
Alternate protein names: Protein-methionine-S-oxide reductase; Peptide-methionine (S)-S-oxide reductase; Peptide Met(O) reductase [H]
Number of amino acids: Translated: 242; Mature: 242
Protein sequence:
>242_residues MFKFLKKIMNKNETISENKNNFLHRILNTNIREEPNSQEDSIIFGCGCFWGAEKCFWKLPGIVTTSVGYAGGEKKNPTYY EVCSGITGHAEVVKVVWNINELDISDLLKMFWECHDPTQKNRQGNDMGTQYRSTIYYTNKNSKDIINLSKEAYQKELTAN NFGEIETEIKMIDTYYYAEEYHQQYLAVEGSRQYCSASPTKVKLGNFNGSNYRLPKEIWDNFNWDIDKCVLRSNNKPIEI NK
Sequences:
>Translated_242_residues MFKFLKKIMNKNETISENKNNFLHRILNTNIREEPNSQEDSIIFGCGCFWGAEKCFWKLPGIVTTSVGYAGGEKKNPTYY EVCSGITGHAEVVKVVWNINELDISDLLKMFWECHDPTQKNRQGNDMGTQYRSTIYYTNKNSKDIINLSKEAYQKELTAN NFGEIETEIKMIDTYYYAEEYHQQYLAVEGSRQYCSASPTKVKLGNFNGSNYRLPKEIWDNFNWDIDKCVLRSNNKPIEI NK >Mature_242_residues MFKFLKKIMNKNETISENKNNFLHRILNTNIREEPNSQEDSIIFGCGCFWGAEKCFWKLPGIVTTSVGYAGGEKKNPTYY EVCSGITGHAEVVKVVWNINELDISDLLKMFWECHDPTQKNRQGNDMGTQYRSTIYYTNKNSKDIINLSKEAYQKELTAN NFGEIETEIKMIDTYYYAEEYHQQYLAVEGSRQYCSASPTKVKLGNFNGSNYRLPKEIWDNFNWDIDKCVLRSNNKPIEI NK
Specific function: Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine [H]
COG id: COG0225
COG function: function code O; Peptide methionine sulfoxide reductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the msrA Met sulfoxide reductase family [H]
Homologues:
Organism=Homo sapiens, GI6912516, Length=177, Percent_Identity=51.9774011299435, Blast_Score=181, Evalue=4e-46, Organism=Homo sapiens, GI208609995, Length=177, Percent_Identity=51.9774011299435, Blast_Score=180, Evalue=1e-45, Organism=Homo sapiens, GI208609993, Length=116, Percent_Identity=52.5862068965517, Blast_Score=122, Evalue=3e-28, Organism=Escherichia coli, GI1790665, Length=165, Percent_Identity=47.2727272727273, Blast_Score=162, Evalue=2e-41, Organism=Caenorhabditis elegans, GI17533973, Length=142, Percent_Identity=35.9154929577465, Blast_Score=97, Evalue=7e-21, Organism=Saccharomyces cerevisiae, GI6320881, Length=173, Percent_Identity=36.9942196531792, Blast_Score=101, Evalue=1e-22, Organism=Drosophila melanogaster, GI24664627, Length=176, Percent_Identity=30.6818181818182, Blast_Score=84, Evalue=7e-17, Organism=Drosophila melanogaster, GI24664631, Length=176, Percent_Identity=30.1136363636364, Blast_Score=80, Evalue=1e-15, Organism=Drosophila melanogaster, GI45553131, Length=163, Percent_Identity=31.2883435582822, Blast_Score=77, Evalue=1e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002569 [H]
Pfam domain/function: PF01625 PMSR [H]
EC number: =1.8.4.11 [H]
Molecular weight: Translated: 28178; Mature: 28178
Theoretical pI: Translated: 6.89; Mature: 6.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFKFLKKIMNKNETISENKNNFLHRILNTNIREEPNSQEDSIIFGCGCFWGAEKCFWKLP CHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCEEEEEHHHHCCHHHHHHCC GIVTTSVGYAGGEKKNPTYYEVCSGITGHAEVVKVVWNINELDISDLLKMFWECHDPTQK CEEEECCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHC NRQGNDMGTQYRSTIYYTNKNSKDIINLSKEAYQKELTANNFGEIETEIKMIDTYYYAEE CCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH YHQQYLAVEGSRQYCSASPTKVKLGNFNGSNYRLPKEIWDNFNWDIDKCVLRSNNKPIEI HHHHHEEECCCCHHCCCCCCEEEEECCCCCCEECCHHHHCCCCCCHHHHHHHCCCCCEEE NK CC >Mature Secondary Structure MFKFLKKIMNKNETISENKNNFLHRILNTNIREEPNSQEDSIIFGCGCFWGAEKCFWKLP CHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCEEEEEHHHHCCHHHHHHCC GIVTTSVGYAGGEKKNPTYYEVCSGITGHAEVVKVVWNINELDISDLLKMFWECHDPTQK CEEEECCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHC NRQGNDMGTQYRSTIYYTNKNSKDIINLSKEAYQKELTANNFGEIETEIKMIDTYYYAEE CCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH YHQQYLAVEGSRQYCSASPTKVKLGNFNGSNYRLPKEIWDNFNWDIDKCVLRSNNKPIEI HHHHHEEECCCCHHCCCCCCEEEEECCCCCCEECCHHHHCCCCCCHHHHHHHCCCCCEEE NK CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA