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The map label for this gene is selU [H]

Identifier: 123966241

GI number: 123966241

Start: 901715

End: 902767

Strand: Direct

Name: selU [H]

Synonym: P9515_10081

Alternate gene names: 123966241

Gene position: 901715-902767 (Clockwise)

Preceding gene: 123966238

Following gene: 123966242

Centisome position: 52.91

GC content: 27.35

Gene sequence:

>1053_bases
ATGTACTCCAAAAGAGAAGAACTAGAGAAATTTAGGAAGCGTAACGGACCACTTATCGATGTTAGAAGTCCCGGAGAATA
TTATAAAGGAAATATGCCAAATTCTATAAATATTCCGTTATTTGATAATGAAGAGAGATCAATAGTAGGAACTATATATA
AAAAGCATGGAAGAGAAAAAGCAGTAATTCAAGGTTTGGAATTTATAGCTGAGAAAATAGAAACTATTGTGAATAAATTA
TTTGAGACTATTAATGATTATAATTCTAAAAATTATATTTCAAAATTAGAAGAGCCTACTTTAAAAATTTACTGTGCTAG
AGGTGGAATGAGGTCTCAAAGTATATCTTGGCTTTTAGAAAAATACAATCAGAGAAGCGTTATATTGGAAAATGGTTATA
AAAGATATAGAAAATGGATTTTAGAAAGCTTTAATCAAGAGTGGAAAATAATTGTTATTGGAGGTAAAACCGGTACAGGG
AAAACTAAATTATTAAAATTACTTGATAAAAACAATTATCAAATAATTGATTTAGAAGGGTTAGCTTGCCATAGGGGAAG
TACTTTTGGAGGCCTAGGAATGAGAGAACAACCTTCAAATGAACAATTTGAAAATAAAATAGCAGAGGAGCTAAAAGGAT
TTAAAAAAAACAATAAAATATTCGTTGAAGCAGAAAGTTCAAATATTGGAAAATGTAAAATCCCTCATGAGTTTTTTAAT
CAAATGAAAACAGCAGAAAGAATTGAGATCAAAAAAAGTGAATCAAATCGTTTAGAAGAATTAATACAAACATATAGTAT
CTTCCAAGAAAAAGACCTTATAGAAGCAGTTTTAAGAATAAAAAAAAGACTAGGTCCACAAAGAACAAAAAATGCAATTG
AGTCAATAAAAATTAAAGATTGGAAATCAGTTTGCAAATCTGTTTTAGAATATTATGATAAATGCTATGAATATGAAAAA
ACTGGTAAAAACAATATAAAAGTAATTGACATGACTGATATATTTGACGATCAAAAAACTTTGAGATTAATAAAAGAATT
TATGAAATTCTAA

Upstream 100 bases:

>100_bases
ATTCAACAAATTTTTTAACTAAAGCTAATGTACTCTTATAATGGTAATCTTGATCTTTGTTTTTCATTTCTAATAAACTC
ATCTAATATTTAAACCATCT

Downstream 100 bases:

>100_bases
ATTTTAACGAAATTTGCTTTTATTATCTACAATATGAAATTAACCCCTAATTATTATGGCAGCAAATAACTTAGCAAAGA
TTCAATTTTATGAAGGAACT

Product: tRNA 2-selenouridine synthase

Products: NA

Alternate protein names: Selenophosphate-dependent tRNA 2-selenouridine synthase [H]

Number of amino acids: Translated: 350; Mature: 350

Protein sequence:

>350_residues
MYSKREELEKFRKRNGPLIDVRSPGEYYKGNMPNSINIPLFDNEERSIVGTIYKKHGREKAVIQGLEFIAEKIETIVNKL
FETINDYNSKNYISKLEEPTLKIYCARGGMRSQSISWLLEKYNQRSVILENGYKRYRKWILESFNQEWKIIVIGGKTGTG
KTKLLKLLDKNNYQIIDLEGLACHRGSTFGGLGMREQPSNEQFENKIAEELKGFKKNNKIFVEAESSNIGKCKIPHEFFN
QMKTAERIEIKKSESNRLEELIQTYSIFQEKDLIEAVLRIKKRLGPQRTKNAIESIKIKDWKSVCKSVLEYYDKCYEYEK
TGKNNIKVIDMTDIFDDQKTLRLIKEFMKF

Sequences:

>Translated_350_residues
MYSKREELEKFRKRNGPLIDVRSPGEYYKGNMPNSINIPLFDNEERSIVGTIYKKHGREKAVIQGLEFIAEKIETIVNKL
FETINDYNSKNYISKLEEPTLKIYCARGGMRSQSISWLLEKYNQRSVILENGYKRYRKWILESFNQEWKIIVIGGKTGTG
KTKLLKLLDKNNYQIIDLEGLACHRGSTFGGLGMREQPSNEQFENKIAEELKGFKKNNKIFVEAESSNIGKCKIPHEFFN
QMKTAERIEIKKSESNRLEELIQTYSIFQEKDLIEAVLRIKKRLGPQRTKNAIESIKIKDWKSVCKSVLEYYDKCYEYEK
TGKNNIKVIDMTDIFDDQKTLRLIKEFMKF
>Mature_350_residues
MYSKREELEKFRKRNGPLIDVRSPGEYYKGNMPNSINIPLFDNEERSIVGTIYKKHGREKAVIQGLEFIAEKIETIVNKL
FETINDYNSKNYISKLEEPTLKIYCARGGMRSQSISWLLEKYNQRSVILENGYKRYRKWILESFNQEWKIIVIGGKTGTG
KTKLLKLLDKNNYQIIDLEGLACHRGSTFGGLGMREQPSNEQFENKIAEELKGFKKNNKIFVEAESSNIGKCKIPHEFFN
QMKTAERIEIKKSESNRLEELIQTYSIFQEKDLIEAVLRIKKRLGPQRTKNAIESIKIKDWKSVCKSVLEYYDKCYEYEK
TGKNNIKVIDMTDIFDDQKTLRLIKEFMKF

Specific function: Catalyzes the transfer of selenium from selenophosphate for conversion of 2-thiouridine to 2-selenouridine at the wobble position in tRNA [H]

COG id: COG2603

COG function: function code R; Predicted ATPase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 rhodanese domain [H]

Homologues:

Organism=Escherichia coli, GI1786712, Length=338, Percent_Identity=30.7692307692308, Blast_Score=133, Evalue=1e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001763
- InterPro:   IPR017582 [H]

Pfam domain/function: PF00581 Rhodanese [H]

EC number: NA

Molecular weight: Translated: 41103; Mature: 41103

Theoretical pI: Translated: 9.79; Mature: 9.79

Prosite motif: PS50206 RHODANESE_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYSKREELEKFRKRNGPLIDVRSPGEYYKGNMPNSINIPLFDNEERSIVGTIYKKHGREK
CCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCEECCCCCHHHHHHHHHHCCHH
AVIQGLEFIAEKIETIVNKLFETINDYNSKNYISKLEEPTLKIYCARGGMRSQSISWLLE
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCEEEEECCCCCCHHHHHHHHH
KYNQRSVILENGYKRYRKWILESFNQEWKIIVIGGKTGTGKTKLLKLLDKNNYQIIDLEG
HHCCCEEEHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHCCCCCEEEEECC
LACHRGSTFGGLGMREQPSNEQFENKIAEELKGFKKNNKIFVEAESSNIGKCKIPHEFFN
CEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCEEECCHHHHH
QMKTAERIEIKKSESNRLEELIQTYSIFQEKDLIEAVLRIKKRLGPQRTKNAIESIKIKD
HHHHHHHHHEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHH
WKSVCKSVLEYYDKCYEYEKTGKNNIKVIDMTDIFDDQKTLRLIKEFMKF
HHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHCCHHHHHHHHHHHCC
>Mature Secondary Structure
MYSKREELEKFRKRNGPLIDVRSPGEYYKGNMPNSINIPLFDNEERSIVGTIYKKHGREK
CCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCEECCCCCHHHHHHHHHHCCHH
AVIQGLEFIAEKIETIVNKLFETINDYNSKNYISKLEEPTLKIYCARGGMRSQSISWLLE
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCEEEEECCCCCCHHHHHHHHH
KYNQRSVILENGYKRYRKWILESFNQEWKIIVIGGKTGTGKTKLLKLLDKNNYQIIDLEG
HHCCCEEEHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHCCCCCEEEEECC
LACHRGSTFGGLGMREQPSNEQFENKIAEELKGFKKNNKIFVEAESSNIGKCKIPHEFFN
CEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCEEECCHHHHH
QMKTAERIEIKKSESNRLEELIQTYSIFQEKDLIEAVLRIKKRLGPQRTKNAIESIKIKD
HHHHHHHHHEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHH
WKSVCKSVLEYYDKCYEYEKTGKNNIKVIDMTDIFDDQKTLRLIKEFMKF
HHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA