| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
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The map label for this gene is 123966178
Identifier: 123966178
GI number: 123966178
Start: 837749
End: 838060
Strand: Reverse
Name: 123966178
Synonym: P9515_09451
Alternate gene names: NA
Gene position: 838060-837749 (Counterclockwise)
Preceding gene: 123966180
Following gene: 123966177
Centisome position: 49.18
GC content: 32.05
Gene sequence:
>312_bases ATGATTAAGTCTATTTATAAGTCAGTGTTTTCAATCGTAATGATAGGTTTTCTTTTCATTACATTACCAATAAAAACTTA TGCTGATAATTTTAATAAAATTAGCGACCTGTTTATTGTTACTCAGCAAAAAACAGTTATAAATTACGAAAAAAGTCAGC CTTCCTCAATTGATAACCCAGTAGTTGATCCCAACTTTAACGCAATGAGAGCTGAGGATGCTGAGAGTTCTACAGCTACT TATATAGTTATTGGCCTCTTAGTTGCAGCTACAATAATACCTCTTGCAACATGGTGGTTTTTCTCAAAATAA
Upstream 100 bases:
>100_bases CTAAGTAAATTAAAAAATTACTTGAAATAATTATATTGGGTTTTATCCAAAGATTCTCAGACTTATAGTTTATTATTATA TAATTGTCTAAAAAACCAAA
Downstream 100 bases:
>100_bases GTTTTTTTAAAGATGGAAAATCATGGTAATAATTTTGCAAAAGTAATATTTATAACTGGGGGAACAAAGAGCGGTAAAAG CGAATTTGCAGAATATTTAG
Product: fusion glycoprotein F0
Products: NA
Alternate protein names: Fusion Glyco-Like
Number of amino acids: Translated: 103; Mature: 103
Protein sequence:
>103_residues MIKSIYKSVFSIVMIGFLFITLPIKTYADNFNKISDLFIVTQQKTVINYEKSQPSSIDNPVVDPNFNAMRAEDAESSTAT YIVIGLLVAATIIPLATWWFFSK
Sequences:
>Translated_103_residues MIKSIYKSVFSIVMIGFLFITLPIKTYADNFNKISDLFIVTQQKTVINYEKSQPSSIDNPVVDPNFNAMRAEDAESSTAT YIVIGLLVAATIIPLATWWFFSK >Mature_103_residues MIKSIYKSVFSIVMIGFLFITLPIKTYADNFNKISDLFIVTQQKTVINYEKSQPSSIDNPVVDPNFNAMRAEDAESSTAT YIVIGLLVAATIIPLATWWFFSK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11604; Mature: 11604
Theoretical pI: Translated: 6.67; Mature: 6.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKSIYKSVFSIVMIGFLFITLPIKTYADNFNKISDLFIVTQQKTVINYEKSQPSSIDNP CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHEEECCHHEEEECCCCCCCCCCC VVDPNFNAMRAEDAESSTATYIVIGLLVAATIIPLATWWFFSK CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MIKSIYKSVFSIVMIGFLFITLPIKTYADNFNKISDLFIVTQQKTVINYEKSQPSSIDNP CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHEEECCHHEEEECCCCCCCCCCC VVDPNFNAMRAEDAESSTATYIVIGLLVAATIIPLATWWFFSK CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA