| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
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The map label for this gene is 123966175
Identifier: 123966175
GI number: 123966175
Start: 836211
End: 836573
Strand: Direct
Name: 123966175
Synonym: P9515_09421
Alternate gene names: NA
Gene position: 836211-836573 (Clockwise)
Preceding gene: 123966172
Following gene: 123966179
Centisome position: 49.07
GC content: 25.9
Gene sequence:
>363_bases ATGCCCACTCAAAGAAAAAGAATTGGGTTCTTACCAAGTGCAGAAGTTCAGAAAATAATAGATCAACTTTGCAAAAATAA TAAATTAAGTCAATCAAAAGTGACTGGGATATTAGTTGAAGAAGCACTATGTTCTAGGGGAGTATTAATTAATTCAAAAA ATAAAAAAAATTATGAATTTTCGTCTAATATTGATAATTCGGCACTAATTACTAATGATATTTTTGATAACAAAGAACAT AAAAAGTGTGAAGATCTCAATTTAGATGAAAAATATGTAGAGGATGAGGTCCAAATGATTAATGACTACATTGAGTTCAA ATTTTTCAAGAATATAATGAACAAAAATAAAAAAATAAATTAG
Upstream 100 bases:
>100_bases ATCCTATTGGAATTATTAGAACTTCCATTAATTTTACGTTGACTTATACTAAATATAGTGCAACACTAGAAAGACGCAAG TGTCACAGAAATATTGTATT
Downstream 100 bases:
>100_bases CTGTACGTGTCACACCATAATAATAATGTCTCGAGCGTGACTTGAACACGCGACCTGCGGGCTATGAATCCGCCGCTCTA ACCAGCTGAGCTACCGAGAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 120; Mature: 119
Protein sequence:
>120_residues MPTQRKRIGFLPSAEVQKIIDQLCKNNKLSQSKVTGILVEEALCSRGVLINSKNKKNYEFSSNIDNSALITNDIFDNKEH KKCEDLNLDEKYVEDEVQMINDYIEFKFFKNIMNKNKKIN
Sequences:
>Translated_120_residues MPTQRKRIGFLPSAEVQKIIDQLCKNNKLSQSKVTGILVEEALCSRGVLINSKNKKNYEFSSNIDNSALITNDIFDNKEH KKCEDLNLDEKYVEDEVQMINDYIEFKFFKNIMNKNKKIN >Mature_119_residues PTQRKRIGFLPSAEVQKIIDQLCKNNKLSQSKVTGILVEEALCSRGVLINSKNKKNYEFSSNIDNSALITNDIFDNKEHK KCEDLNLDEKYVEDEVQMINDYIEFKFFKNIMNKNKKIN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13992; Mature: 13861
Theoretical pI: Translated: 8.46; Mature: 8.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTQRKRIGFLPSAEVQKIIDQLCKNNKLSQSKVTGILVEEALCSRGVLINSKNKKNYEF CCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCEEECCCCCCCCC SSNIDNSALITNDIFDNKEHKKCEDLNLDEKYVEDEVQMINDYIEFKFFKNIMNKNKKIN CCCCCCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure PTQRKRIGFLPSAEVQKIIDQLCKNNKLSQSKVTGILVEEALCSRGVLINSKNKKNYEF CCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCEEECCCCCCCCC SSNIDNSALITNDIFDNKEHKKCEDLNLDEKYVEDEVQMINDYIEFKFFKNIMNKNKKIN CCCCCCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA