Click here to switch to the map view.

The map label for this gene is rpmF

Identifier: 123966163

GI number: 123966163

Start: 830773

End: 830949

Strand: Reverse

Name: rpmF

Synonym: P9515_09301

Alternate gene names: 123966163

Gene position: 830949-830773 (Counterclockwise)

Preceding gene: 123966166

Following gene: 123966159

Centisome position: 48.76

GC content: 37.29

Gene sequence:

>177_bases
ATGGCTGTCCCTAAGAAGAAAAAATCAAAAAGCAAGAGAAATCACAGACATGCTGTATGGAAAGGTAAAGCAGCGTTGGC
AGCACAAAAAGCTATTTCACTAGGTAAATCTGTTTTAACTGGTAAAGCTCAAGGATTTGTATATCCTATTGACGAGGAAG
AAGAGAGTGAAGAATAA

Upstream 100 bases:

>100_bases
AGCCCAGTTTAAGAATTGCAGTATTTAAAACAAATATACTCAAATATTTGGGAGATAACCATCGAAAGGTTATATTAATA
GATGGAAATAAGAAATTAGT

Downstream 100 bases:

>100_bases
TTTAATCAAGATCCTAATTTAAATGCTTCAAGAATCACAGCATATGTTGCTCCAATTCGAACTTTATCTAATATTGACCA
AAGGTTAAAGAAACCAGAAC

Product: 50S ribosomal protein L32

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 58; Mature: 57

Protein sequence:

>58_residues
MAVPKKKKSKSKRNHRHAVWKGKAALAAQKAISLGKSVLTGKAQGFVYPIDEEEESEE

Sequences:

>Translated_58_residues
MAVPKKKKSKSKRNHRHAVWKGKAALAAQKAISLGKSVLTGKAQGFVYPIDEEEESEE
>Mature_57_residues
AVPKKKKSKSKRNHRHAVWKGKAALAAQKAISLGKSVLTGKAQGFVYPIDEEEESEE

Specific function: Unknown

COG id: COG0333

COG function: function code J; Ribosomal protein L32

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L32P family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RL32_PROM5 (A2BWH6)

Other databases:

- EMBL:   CP000552
- RefSeq:   YP_001011244.1
- ProteinModelPortal:   A2BWH6
- SMR:   A2BWH6
- STRING:   A2BWH6
- GeneID:   4719338
- GenomeReviews:   CP000552_GR
- KEGG:   pmc:P9515_09301
- HOGENOM:   HBG621788
- OMA:   TGRSTFV
- ProtClustDB:   PRK01110
- BioCyc:   PMAR167542:P9515ORF_0976-MONOMER
- GO:   GO:0006412
- HAMAP:   MF_00340
- InterPro:   IPR002677
- TIGRFAMs:   TIGR01031

Pfam domain/function: PF01783 Ribosomal_L32p

EC number: NA

Molecular weight: Translated: 6392; Mature: 6261

Theoretical pI: Translated: 10.60; Mature: 10.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVPKKKKSKSKRNHRHAVWKGKAALAAQKAISLGKSVLTGKAQGFVYPIDEEEESEE
CCCCCCCCHHHHCCCCCCHHCCHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCC
>Mature Secondary Structure 
AVPKKKKSKSKRNHRHAVWKGKAALAAQKAISLGKSVLTGKAQGFVYPIDEEEESEE
CCCCCCCHHHHCCCCCCHHCCHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA