| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
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The map label for this gene is 123966080
Identifier: 123966080
GI number: 123966080
Start: 766203
End: 766640
Strand: Direct
Name: 123966080
Synonym: P9515_08471
Alternate gene names: NA
Gene position: 766203-766640 (Clockwise)
Preceding gene: 123966078
Following gene: 123966081
Centisome position: 44.96
GC content: 26.26
Gene sequence:
>438_bases ATGGAGAAAAAAGAACCAAGAAAGGCTCAAGATATAAAAAATCCAACCTTTGTGAATAAAAAATTAAAAGCTTCTAGCAA TTCAAATAATAAAAAAGATAAAATCTTACCTTGGTGGGTGGAATTATTGTTTGTTCAAATTGGATTGCCTGATAAATGGC TGATTAAAGTATTACAGTCAAAAAGAAAAAGTACAGAGTTAATTAAAAATGAAAAAAGATTAATAGTTACATTTTTATTA ATCTTAGCTGGTCTCACTTATTTTTATCCAGTGGTTAAATATTCTAAAACCAAATTAGAATGCGAGAGGATTGCTAAAAA TTATATTATTGAGAATAAGAATTTAATAAAAATAAAGCGACAACAATTGAGAATGTTATCTACTAATTTTTGCAATGGCG GTGATGAAATATATCAACTTGAAAATCTCAAAGATTGA
Upstream 100 bases:
>100_bases AATCAAGATCATGGATAAATTAAATTAAAAATTAAAAAATAAAAATATAGTTTTCAAATCAAAATAAAAACAGTATATTC CAATTAAGCAATTTTATAAT
Downstream 100 bases:
>100_bases TCTAATTATTTTTTTTCAATTATGATTTAATATAAACTAATATAAGTTTACAAAATAAAATTTAATTTAAATTAAATACT TTTTCTATGACAGACTTGAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 145; Mature: 145
Protein sequence:
>145_residues MEKKEPRKAQDIKNPTFVNKKLKASSNSNNKKDKILPWWVELLFVQIGLPDKWLIKVLQSKRKSTELIKNEKRLIVTFLL ILAGLTYFYPVVKYSKTKLECERIAKNYIIENKNLIKIKRQQLRMLSTNFCNGGDEIYQLENLKD
Sequences:
>Translated_145_residues MEKKEPRKAQDIKNPTFVNKKLKASSNSNNKKDKILPWWVELLFVQIGLPDKWLIKVLQSKRKSTELIKNEKRLIVTFLL ILAGLTYFYPVVKYSKTKLECERIAKNYIIENKNLIKIKRQQLRMLSTNFCNGGDEIYQLENLKD >Mature_145_residues MEKKEPRKAQDIKNPTFVNKKLKASSNSNNKKDKILPWWVELLFVQIGLPDKWLIKVLQSKRKSTELIKNEKRLIVTFLL ILAGLTYFYPVVKYSKTKLECERIAKNYIIENKNLIKIKRQQLRMLSTNFCNGGDEIYQLENLKD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17145; Mature: 17145
Theoretical pI: Translated: 10.53; Mature: 10.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKKEPRKAQDIKNPTFVNKKLKASSNSNNKKDKILPWWVELLFVQIGLPDKWLIKVLQS CCCCCCCHHHHCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHH KRKSTELIKNEKRLIVTFLLILAGLTYFYPVVKYSKTKLECERIAKNYIIENKNLIKIKR HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH QQLRMLSTNFCNGGDEIYQLENLKD HHHHHHHHHCCCCCCHHHHCCCCCC >Mature Secondary Structure MEKKEPRKAQDIKNPTFVNKKLKASSNSNNKKDKILPWWVELLFVQIGLPDKWLIKVLQS CCCCCCCHHHHCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHH KRKSTELIKNEKRLIVTFLLILAGLTYFYPVVKYSKTKLECERIAKNYIIENKNLIKIKR HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH QQLRMLSTNFCNGGDEIYQLENLKD HHHHHHHHHCCCCCCHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA