| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
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The map label for this gene is 123965951
Identifier: 123965951
GI number: 123965951
Start: 651142
End: 651564
Strand: Reverse
Name: 123965951
Synonym: P9515_07161
Alternate gene names: NA
Gene position: 651564-651142 (Counterclockwise)
Preceding gene: 123965952
Following gene: 123965949
Centisome position: 38.23
GC content: 24.59
Gene sequence:
>423_bases ATGAGATCTCTCAAAACGAGGAGATATAAAATGGAATTAAAAAAAATAAAAACAAAGTATCTTAAATTAATTCCATCATC TTTAAATTTAAATTTAGCTCCTCAAAAATCAAAATTTGGAATAGTTTATACTCTTTATTCTGATAAGTTTAATTTAATTG AAGTAGGTTTTGCTGAAAACAATAAAATCCTACAAAATAAGGTTTTGCATAGCGAATTTATTTTATTAGATAAGAAGATG GGCAAACAGCAAGATCTTAATTTATTAATAAAAACTTTAAAAGAATTGGATATGAATTTTTCCAAAAAACTAAATATCAC ATATTCAAATATTCTAATTAGACATTTGTCTACTTTAGGCTGGCCCGTTGGAAGATCTCTTTACAAACAGAGAAAAATCA AAAAAGAACTTTCATTAGCTTAA
Upstream 100 bases:
>100_bases AAAAGCAAAGGTTCGATCCCTTCAATAGCGATAAATAGATATGATTCAGCTTGCCAAAAGAGAATTGCTTTAGCGGAAGT GAATAATTTATTAGAAAAGT
Downstream 100 bases:
>100_bases AGTTAAATATAATCACATTCTAAAGTTTCTCTAGTTTCTCTATTTGTAAAAGGATTCGTGCCAGAGGCCTCTTTACAAAA TTCCCTCACGATATCTTTTG
Product: LEM domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 140; Mature: 140
Protein sequence:
>140_residues MRSLKTRRYKMELKKIKTKYLKLIPSSLNLNLAPQKSKFGIVYTLYSDKFNLIEVGFAENNKILQNKVLHSEFILLDKKM GKQQDLNLLIKTLKELDMNFSKKLNITYSNILIRHLSTLGWPVGRSLYKQRKIKKELSLA
Sequences:
>Translated_140_residues MRSLKTRRYKMELKKIKTKYLKLIPSSLNLNLAPQKSKFGIVYTLYSDKFNLIEVGFAENNKILQNKVLHSEFILLDKKM GKQQDLNLLIKTLKELDMNFSKKLNITYSNILIRHLSTLGWPVGRSLYKQRKIKKELSLA >Mature_140_residues MRSLKTRRYKMELKKIKTKYLKLIPSSLNLNLAPQKSKFGIVYTLYSDKFNLIEVGFAENNKILQNKVLHSEFILLDKKM GKQQDLNLLIKTLKELDMNFSKKLNITYSNILIRHLSTLGWPVGRSLYKQRKIKKELSLA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16445; Mature: 16445
Theoretical pI: Translated: 10.89; Mature: 10.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSLKTRRYKMELKKIKTKYLKLIPSSLNLNLAPQKSKFGIVYTLYSDKFNLIEVGFAEN CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCEEEEEEECCCCCEEEEEECCC NKILQNKVLHSEFILLDKKMGKQQDLNLLIKTLKELDMNFSKKLNITYSNILIRHLSTLG CHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCEEECHHHHHHHHHHHHHC WPVGRSLYKQRKIKKELSLA CHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MRSLKTRRYKMELKKIKTKYLKLIPSSLNLNLAPQKSKFGIVYTLYSDKFNLIEVGFAEN CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCEEEEEEECCCCCEEEEEECCC NKILQNKVLHSEFILLDKKMGKQQDLNLLIKTLKELDMNFSKKLNITYSNILIRHLSTLG CHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCEEECHHHHHHHHHHHHHC WPVGRSLYKQRKIKKELSLA CHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA