| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
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The map label for this gene is 123965904
Identifier: 123965904
GI number: 123965904
Start: 604749
End: 605915
Strand: Direct
Name: 123965904
Synonym: P9515_06691
Alternate gene names: NA
Gene position: 604749-605915 (Clockwise)
Preceding gene: 123965903
Following gene: 123965907
Centisome position: 35.49
GC content: 31.28
Gene sequence:
>1167_bases ATGTATAAAGAACTAAATAATAAAAGTTGGAATTGGTGGCCTTTATTTCCCCTTTATCCATATGGAAATAAGAAAACTAT TCTTAGAGAAATAGTTCCTAATGAAATATGGTCCTTGGAACAGATTCAAGGTTTGTATTATGTTGCAGTTCCAATAAGAA TGACAATAATTAAGGTTAATAATGGGCTAATGCTAATTAATCCTTTACCTCCTACGAAGGAACTTGTAACTGAATTAGAA AAATTAGTTTCTATTTATGGAGAAGTAAAAACAATTGTCCTTCCTACAGCTTCAGGATTAGAACATAAAATTGGGTTGCC AGCATTAGCAAGGGTTTTTAAGGATTCTGAGATTTGGTTATGCCCTGGCCAATGGAGTTTTCCTATTAATCTACCTTTAG ATTTTCTCGGGATTCCTTCAAAAAGGACAAAGATACTTTTCGAAGATGGAATTCCTTATGAAGAATGTTTTAAATGGTCT TCAATAGGGCCTTTAAATTTAGGACTTGGTAACTATCAAGAGGTGTGTTGTTATCATCTTTCAACAAGGACATTACATGT TACAGACGCAATAGTTGGAATCGATTCAAAGCCTCCAGAAATATTTAATTTCGACCCTACCCCATTATTATTTCATTCGA GAGATCGAGGAGATGAACCTGTCCTTGATACTTTTGAAGCTAGAAAAAAAGGCTGGGCAAGGATTGTTTTGTTTGCATCT TTTTTGAAACCAGGAAAATTAAGAATCCCCTCTCTGAAACAAATAATCAAATATTCTTTTAGAGAAGGTCTTCGAAATAA AAAAGCACATTTTGGTATATATCCTTTTTCTTGGGATGAAGATTGGGAATCATCTTTAGTTGAAATAATGGGTGAAAATA TTCCTAAGATTCAGATTGCTCCTGTTTTGCAAAATTTAATATTTCCTCGATCAAAACATGTACTTCTTTTATGGCTTGAG AAGATTAAAACTTATAAAAATATGGAATATTTGATATCAGCTCATTATTCTGCACCTGTTAATTTTAGAAAAGAAGATTG TCAAAATTTAATAGATGAAATTAATTCAGAAAAATGGAACAAATCTCCTGATGATAATAAATTCCTTATTAATTTTTATA AGAAATTATTTGAATTGGGGATAATTCCCGAAAAAGTAAATATTTAG
Upstream 100 bases:
>100_bases TTGTCTTGGTTCAAACGTTTATATTTTTATTTGCTTTTTTGTTTGCTCCAAGATATGGGTTATTCAAAATTAGAAAAATA TTTTCTAATTATTAACAATA
Downstream 100 bases:
>100_bases AGAGTTATTCGTTTTCAATGGACATATCTTCATCTTTTTTTAGAGTTTGTTCAAGCTCTTTCCTTTGCTCCATTTGTCTT AAGAAATATCCTGTCATCAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 388; Mature: 388
Protein sequence:
>388_residues MYKELNNKSWNWWPLFPLYPYGNKKTILREIVPNEIWSLEQIQGLYYVAVPIRMTIIKVNNGLMLINPLPPTKELVTELE KLVSIYGEVKTIVLPTASGLEHKIGLPALARVFKDSEIWLCPGQWSFPINLPLDFLGIPSKRTKILFEDGIPYEECFKWS SIGPLNLGLGNYQEVCCYHLSTRTLHVTDAIVGIDSKPPEIFNFDPTPLLFHSRDRGDEPVLDTFEARKKGWARIVLFAS FLKPGKLRIPSLKQIIKYSFREGLRNKKAHFGIYPFSWDEDWESSLVEIMGENIPKIQIAPVLQNLIFPRSKHVLLLWLE KIKTYKNMEYLISAHYSAPVNFRKEDCQNLIDEINSEKWNKSPDDNKFLINFYKKLFELGIIPEKVNI
Sequences:
>Translated_388_residues MYKELNNKSWNWWPLFPLYPYGNKKTILREIVPNEIWSLEQIQGLYYVAVPIRMTIIKVNNGLMLINPLPPTKELVTELE KLVSIYGEVKTIVLPTASGLEHKIGLPALARVFKDSEIWLCPGQWSFPINLPLDFLGIPSKRTKILFEDGIPYEECFKWS SIGPLNLGLGNYQEVCCYHLSTRTLHVTDAIVGIDSKPPEIFNFDPTPLLFHSRDRGDEPVLDTFEARKKGWARIVLFAS FLKPGKLRIPSLKQIIKYSFREGLRNKKAHFGIYPFSWDEDWESSLVEIMGENIPKIQIAPVLQNLIFPRSKHVLLLWLE KIKTYKNMEYLISAHYSAPVNFRKEDCQNLIDEINSEKWNKSPDDNKFLINFYKKLFELGIIPEKVNI >Mature_388_residues MYKELNNKSWNWWPLFPLYPYGNKKTILREIVPNEIWSLEQIQGLYYVAVPIRMTIIKVNNGLMLINPLPPTKELVTELE KLVSIYGEVKTIVLPTASGLEHKIGLPALARVFKDSEIWLCPGQWSFPINLPLDFLGIPSKRTKILFEDGIPYEECFKWS SIGPLNLGLGNYQEVCCYHLSTRTLHVTDAIVGIDSKPPEIFNFDPTPLLFHSRDRGDEPVLDTFEARKKGWARIVLFAS FLKPGKLRIPSLKQIIKYSFREGLRNKKAHFGIYPFSWDEDWESSLVEIMGENIPKIQIAPVLQNLIFPRSKHVLLLWLE KIKTYKNMEYLISAHYSAPVNFRKEDCQNLIDEINSEKWNKSPDDNKFLINFYKKLFELGIIPEKVNI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45054; Mature: 45054
Theoretical pI: Translated: 8.62; Mature: 8.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYKELNNKSWNWWPLFPLYPYGNKKTILREIVPNEIWSLEQIQGLYYVAVPIRMTIIKVN CCCCCCCCCCCEEECCEECCCCCHHHHHHHHCCHHHCCHHHHCCEEEEEEEEEEEEEEEC NGLMLINPLPPTKELVTELEKLVSIYGEVKTIVLPTASGLEHKIGLPALARVFKDSEIWL CCEEEEECCCCHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCHHHHHHHCCCCEEE CPGQWSFPINLPLDFLGIPSKRTKILFEDGIPYEECFKWSSIGPLNLGLGNYQEVCCYHL CCCCCCCEEECCHHHCCCCCCCCEEEEECCCCHHHHHCCCCCCCCCCCCCCHHHHHHEEC STRTLHVTDAIVGIDSKPPEIFNFDPTPLLFHSRDRGDEPVLDTFEARKKGWARIVLFAS CCCEEEEEEEEEECCCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHCCHHHHHHHHH FLKPGKLRIPSLKQIIKYSFREGLRNKKAHFGIYPFSWDEDWESSLVEIMGENIPKIQIA HCCCCCEECHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHCCCCCCEEHH PVLQNLIFPRSKHVLLLWLEKIKTYKNMEYLISAHYSAPVNFRKEDCQNLIDEINSEKWN HHHHHHHCCCCCCEEEHHHHHHHHHCCHHHEEEECCCCCCCCCHHHHHHHHHHHCCCCCC KSPDDNKFLINFYKKLFELGIIPEKVNI CCCCCCHHHHHHHHHHHHHCCCCHHCCC >Mature Secondary Structure MYKELNNKSWNWWPLFPLYPYGNKKTILREIVPNEIWSLEQIQGLYYVAVPIRMTIIKVN CCCCCCCCCCCEEECCEECCCCCHHHHHHHHCCHHHCCHHHHCCEEEEEEEEEEEEEEEC NGLMLINPLPPTKELVTELEKLVSIYGEVKTIVLPTASGLEHKIGLPALARVFKDSEIWL CCEEEEECCCCHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCHHHHHHHCCCCEEE CPGQWSFPINLPLDFLGIPSKRTKILFEDGIPYEECFKWSSIGPLNLGLGNYQEVCCYHL CCCCCCCEEECCHHHCCCCCCCCEEEEECCCCHHHHHCCCCCCCCCCCCCCHHHHHHEEC STRTLHVTDAIVGIDSKPPEIFNFDPTPLLFHSRDRGDEPVLDTFEARKKGWARIVLFAS CCCEEEEEEEEEECCCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHCCHHHHHHHHH FLKPGKLRIPSLKQIIKYSFREGLRNKKAHFGIYPFSWDEDWESSLVEIMGENIPKIQIA HCCCCCEECHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHCCCCCCEEHH PVLQNLIFPRSKHVLLLWLEKIKTYKNMEYLISAHYSAPVNFRKEDCQNLIDEINSEKWN HHHHHHHCCCCCCEEEHHHHHHHHHCCHHHEEEECCCCCCCCCHHHHHHHHHHHCCCCCC KSPDDNKFLINFYKKLFELGIIPEKVNI CCCCCCHHHHHHHHHHHHHCCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA