| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
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The map label for this gene is thrB [H]
Identifier: 123965895
GI number: 123965895
Start: 595280
End: 596227
Strand: Reverse
Name: thrB [H]
Synonym: P9515_06601
Alternate gene names: 123965895
Gene position: 596227-595280 (Counterclockwise)
Preceding gene: 123965896
Following gene: 123965894
Centisome position: 34.99
GC content: 39.35
Gene sequence:
>948_bases ATGTCTATACCCAATTTAGGTAAAAAAATTATAGTTACAGTTCCTTCTACAACTGCTAATTTAGGTCCCGGATTTGATTG TCTGGGAGCAGCCTTAGACTTATATAATGAATTTATATTCACAAGAATAGAAGGTGATGGAGATAGATTTGATTTAATCA TGGAGAGTACAGACGGCAATCATTTGAGAGGAGGTCCTGAGAACTTAGTCTTTCGAGCGGCACAAAAAGTATGGGAGAGT GCAGATGTATCCCCATTCGCTCTTGAGGCAAGAGTTAAACTTGCAGTCCCCCCAGCTCGTGGACTAGGTAGTAGTGCAAC TGCCATTGTTGCAGGGCTTATTGGAGCCAATGCGATCATGAACTCCCCACTTCCTAAAGAAAAACTCTTAGAACTTGCGA TCGATATAGAAGGTCATCCTGACAATGTAGTTCCATCTCTTTTAGGTGGTTTATGTTTAACAGCAAGATCATCTTCCCAA AGATGGAGAATTATTAGATGTGATTGGCATGATTCGATAAAAGCAGTTATAGCTATACCCGCAATTCGACTTAGCACAAG CGAAGCAAGAAGAGTGATGCCAAAAAATATTCCAATATCTGATGCCGTTACAAACATGGGTGCCCTTACTTTATTACTTA ATGGTTTAAAAACTGGAAATGATGAGCTAATAAAAGAGGGTATGTTTGATAAATTACATGAGCCATATCGCTGGAAACTA ATTAAAGGAGGATTAGAAGTTAAAGAGGCTGCATTACAAGCAGGAGCTTTAGGTTGCGCAATTAGTGGAGCTGGGCCAAG CATTTTAGCTTTATGTAAAAGTAATAATGGCAAGGTAGTAAGTCAGGCGATGGTAAAAGCTTGGGAAAACTTAGGCATTG CAAGTAGAGCTCCATTTTTAAATGTCCAAACGAAGGGGAGTCAATTCAAAACTATTTCAGGTAAGTAG
Upstream 100 bases:
>100_bases TTAAATCTATTCCTATTAAAATAATTTTAGATGAAGAGTTTGGACTTTATAGTGCAGCCTGCAGAGCAAAAATGCTATTA AAAACAACATAACCCTAAGA
Downstream 100 bases:
>100_bases TTTTACTTACACTTTTTAATGTTAAAGTCTCAAGCTGGAGTATCTTCAACTACAATAAAAAAATTGTTCATTACATAAAT GAATTTAGAATCTTTTCCTT
Product: homoserine kinase
Products: NA
Alternate protein names: HK; HSK [H]
Number of amino acids: Translated: 315; Mature: 314
Protein sequence:
>315_residues MSIPNLGKKIIVTVPSTTANLGPGFDCLGAALDLYNEFIFTRIEGDGDRFDLIMESTDGNHLRGGPENLVFRAAQKVWES ADVSPFALEARVKLAVPPARGLGSSATAIVAGLIGANAIMNSPLPKEKLLELAIDIEGHPDNVVPSLLGGLCLTARSSSQ RWRIIRCDWHDSIKAVIAIPAIRLSTSEARRVMPKNIPISDAVTNMGALTLLLNGLKTGNDELIKEGMFDKLHEPYRWKL IKGGLEVKEAALQAGALGCAISGAGPSILALCKSNNGKVVSQAMVKAWENLGIASRAPFLNVQTKGSQFKTISGK
Sequences:
>Translated_315_residues MSIPNLGKKIIVTVPSTTANLGPGFDCLGAALDLYNEFIFTRIEGDGDRFDLIMESTDGNHLRGGPENLVFRAAQKVWES ADVSPFALEARVKLAVPPARGLGSSATAIVAGLIGANAIMNSPLPKEKLLELAIDIEGHPDNVVPSLLGGLCLTARSSSQ RWRIIRCDWHDSIKAVIAIPAIRLSTSEARRVMPKNIPISDAVTNMGALTLLLNGLKTGNDELIKEGMFDKLHEPYRWKL IKGGLEVKEAALQAGALGCAISGAGPSILALCKSNNGKVVSQAMVKAWENLGIASRAPFLNVQTKGSQFKTISGK >Mature_314_residues SIPNLGKKIIVTVPSTTANLGPGFDCLGAALDLYNEFIFTRIEGDGDRFDLIMESTDGNHLRGGPENLVFRAAQKVWESA DVSPFALEARVKLAVPPARGLGSSATAIVAGLIGANAIMNSPLPKEKLLELAIDIEGHPDNVVPSLLGGLCLTARSSSQR WRIIRCDWHDSIKAVIAIPAIRLSTSEARRVMPKNIPISDAVTNMGALTLLLNGLKTGNDELIKEGMFDKLHEPYRWKLI KGGLEVKEAALQAGALGCAISGAGPSILALCKSNNGKVVSQAMVKAWENLGIASRAPFLNVQTKGSQFKTISGK
Specific function: Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate [H]
COG id: COG0083
COG function: function code E; Homoserine kinase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GHMP kinase family. Homoserine kinase subfamily [H]
Homologues:
Organism=Escherichia coli, GI1786184, Length=276, Percent_Identity=30.7971014492754, Blast_Score=109, Evalue=2e-25, Organism=Saccharomyces cerevisiae, GI6321814, Length=334, Percent_Identity=30.8383233532934, Blast_Score=142, Evalue=6e-35,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006204 - InterPro: IPR013750 - InterPro: IPR006203 - InterPro: IPR000870 - InterPro: IPR020568 - InterPro: IPR014721 [H]
Pfam domain/function: PF08544 GHMP_kinases_C; PF00288 GHMP_kinases_N [H]
EC number: =2.7.1.39 [H]
Molecular weight: Translated: 33544; Mature: 33413
Theoretical pI: Translated: 9.01; Mature: 9.01
Prosite motif: PS00627 GHMP_KINASES_ATP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIPNLGKKIIVTVPSTTANLGPGFDCLGAALDLYNEFIFTRIEGDGDRFDLIMESTDGN CCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHEEEEECCCCCEEEEEEECCCCC HLRGGPENLVFRAAQKVWESADVSPFALEARVKLAVPPARGLGSSATAIVAGLIGANAIM CCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHH NSPLPKEKLLELAIDIEGHPDNVVPSLLGGLCLTARSSSQRWRIIRCDWHDSIKAVIAIP CCCCCHHHHEEEEEECCCCCCCHHHHHHHHHEEEECCCCCCEEEEEECCCCCCEEEEEEC AIRLSTSEARRVMPKNIPISDAVTNMGALTLLLNGLKTGNDELIKEGMFDKLHEPYRWKL EEEECCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCEEEEE IKGGLEVKEAALQAGALGCAISGAGPSILALCKSNNGKVVSQAMVKAWENLGIASRAPFL EECCCHHHHHHHHHCCCEEEEECCCCEEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCEE NVQTKGSQFKTISGK EEEECCCEEEECCCC >Mature Secondary Structure SIPNLGKKIIVTVPSTTANLGPGFDCLGAALDLYNEFIFTRIEGDGDRFDLIMESTDGN CCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHEEEEECCCCCEEEEEEECCCCC HLRGGPENLVFRAAQKVWESADVSPFALEARVKLAVPPARGLGSSATAIVAGLIGANAIM CCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHH NSPLPKEKLLELAIDIEGHPDNVVPSLLGGLCLTARSSSQRWRIIRCDWHDSIKAVIAIP CCCCCHHHHEEEEEECCCCCCCHHHHHHHHHEEEECCCCCCEEEEEECCCCCCEEEEEEC AIRLSTSEARRVMPKNIPISDAVTNMGALTLLLNGLKTGNDELIKEGMFDKLHEPYRWKL EEEECCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCEEEEE IKGGLEVKEAALQAGALGCAISGAGPSILALCKSNNGKVVSQAMVKAWENLGIASRAPFL EECCCHHHHHHHHHCCCEEEEECCCCEEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCEE NVQTKGSQFKTISGK EEEECCCEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA