| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
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The map label for this gene is 123965876
Identifier: 123965876
GI number: 123965876
Start: 572202
End: 572576
Strand: Reverse
Name: 123965876
Synonym: P9515_06411
Alternate gene names: NA
Gene position: 572576-572202 (Counterclockwise)
Preceding gene: 123965877
Following gene: 123965875
Centisome position: 33.6
GC content: 33.87
Gene sequence:
>375_bases ATGAATGAGTCCAATACAAAAGAAAAGGAAAAAATATATGATGCAGAGGTTATTGAAAGTTCATCTTTGGATGAAAATAT CATCATAAAAATCCTAATAAAGGCTGGGAGGACAATTGCAAAGCCTGCCTTAGAAGTTTTAGAAATGGCCCTTGATCCTT TTACTCCAACTCAAGTAAGAGTTTCCTTAATGGCTGCATTAGCTTATTTAATAATGCCTTTTGATCTATTCCCTGACTTT ATGCCTTTAGTAGGTTTTAGCGATGACTTTGTTGCACTCACTGCAGTCTTAAGTATTTGGAGTAAGTATATGACTCCTTC AATAAGAATTAGAGCAGAAAGGAAACTTAATAAGTTATTCCCTTTCTTGAAATGA
Upstream 100 bases:
>100_bases AGTTGTACAAAGAGCCTTGAGAAAGCTTAGAAAAGCCGGAATTCAGAATGGACTTGTAGATAGTGTTAGCTAAAAGCCTT TAATTTAATAATTTAAAACT
Downstream 100 bases:
>100_bases ATAAACTATCCCCGCAAGAAGAGAAAGAACTTTTAGATTTTATTAAAGTTTGGTTAAAATCTCACGGATATACCCAAAAA GATCTAGCTAATGAATTGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 124; Mature: 124
Protein sequence:
>124_residues MNESNTKEKEKIYDAEVIESSSLDENIIIKILIKAGRTIAKPALEVLEMALDPFTPTQVRVSLMAALAYLIMPFDLFPDF MPLVGFSDDFVALTAVLSIWSKYMTPSIRIRAERKLNKLFPFLK
Sequences:
>Translated_124_residues MNESNTKEKEKIYDAEVIESSSLDENIIIKILIKAGRTIAKPALEVLEMALDPFTPTQVRVSLMAALAYLIMPFDLFPDF MPLVGFSDDFVALTAVLSIWSKYMTPSIRIRAERKLNKLFPFLK >Mature_124_residues MNESNTKEKEKIYDAEVIESSSLDENIIIKILIKAGRTIAKPALEVLEMALDPFTPTQVRVSLMAALAYLIMPFDLFPDF MPLVGFSDDFVALTAVLSIWSKYMTPSIRIRAERKLNKLFPFLK
Specific function: Unknown
COG id: COG3339
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14086; Mature: 14086
Theoretical pI: Translated: 5.21; Mature: 5.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNESNTKEKEKIYDAEVIESSSLDENIIIKILIKAGRTIAKPALEVLEMALDPFTPTQVR CCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHH VSLMAALAYLIMPFDLFPDFMPLVGFSDDFVALTAVLSIWSKYMTPSIRIRAERKLNKLF HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHC PFLK CCCC >Mature Secondary Structure MNESNTKEKEKIYDAEVIESSSLDENIIIKILIKAGRTIAKPALEVLEMALDPFTPTQVR CCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHH VSLMAALAYLIMPFDLFPDFMPLVGFSDDFVALTAVLSIWSKYMTPSIRIRAERKLNKLF HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHC PFLK CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA