Definition Prochlorococcus marinus str. MIT 9515, complete genome.
Accession NC_008817
Length 1,704,176

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The map label for this gene is 123965876

Identifier: 123965876

GI number: 123965876

Start: 572202

End: 572576

Strand: Reverse

Name: 123965876

Synonym: P9515_06411

Alternate gene names: NA

Gene position: 572576-572202 (Counterclockwise)

Preceding gene: 123965877

Following gene: 123965875

Centisome position: 33.6

GC content: 33.87

Gene sequence:

>375_bases
ATGAATGAGTCCAATACAAAAGAAAAGGAAAAAATATATGATGCAGAGGTTATTGAAAGTTCATCTTTGGATGAAAATAT
CATCATAAAAATCCTAATAAAGGCTGGGAGGACAATTGCAAAGCCTGCCTTAGAAGTTTTAGAAATGGCCCTTGATCCTT
TTACTCCAACTCAAGTAAGAGTTTCCTTAATGGCTGCATTAGCTTATTTAATAATGCCTTTTGATCTATTCCCTGACTTT
ATGCCTTTAGTAGGTTTTAGCGATGACTTTGTTGCACTCACTGCAGTCTTAAGTATTTGGAGTAAGTATATGACTCCTTC
AATAAGAATTAGAGCAGAAAGGAAACTTAATAAGTTATTCCCTTTCTTGAAATGA

Upstream 100 bases:

>100_bases
AGTTGTACAAAGAGCCTTGAGAAAGCTTAGAAAAGCCGGAATTCAGAATGGACTTGTAGATAGTGTTAGCTAAAAGCCTT
TAATTTAATAATTTAAAACT

Downstream 100 bases:

>100_bases
ATAAACTATCCCCGCAAGAAGAGAAAGAACTTTTAGATTTTATTAAAGTTTGGTTAAAATCTCACGGATATACCCAAAAA
GATCTAGCTAATGAATTGAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 124; Mature: 124

Protein sequence:

>124_residues
MNESNTKEKEKIYDAEVIESSSLDENIIIKILIKAGRTIAKPALEVLEMALDPFTPTQVRVSLMAALAYLIMPFDLFPDF
MPLVGFSDDFVALTAVLSIWSKYMTPSIRIRAERKLNKLFPFLK

Sequences:

>Translated_124_residues
MNESNTKEKEKIYDAEVIESSSLDENIIIKILIKAGRTIAKPALEVLEMALDPFTPTQVRVSLMAALAYLIMPFDLFPDF
MPLVGFSDDFVALTAVLSIWSKYMTPSIRIRAERKLNKLFPFLK
>Mature_124_residues
MNESNTKEKEKIYDAEVIESSSLDENIIIKILIKAGRTIAKPALEVLEMALDPFTPTQVRVSLMAALAYLIMPFDLFPDF
MPLVGFSDDFVALTAVLSIWSKYMTPSIRIRAERKLNKLFPFLK

Specific function: Unknown

COG id: COG3339

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14086; Mature: 14086

Theoretical pI: Translated: 5.21; Mature: 5.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNESNTKEKEKIYDAEVIESSSLDENIIIKILIKAGRTIAKPALEVLEMALDPFTPTQVR
CCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHH
VSLMAALAYLIMPFDLFPDFMPLVGFSDDFVALTAVLSIWSKYMTPSIRIRAERKLNKLF
HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHC
PFLK
CCCC
>Mature Secondary Structure
MNESNTKEKEKIYDAEVIESSSLDENIIIKILIKAGRTIAKPALEVLEMALDPFTPTQVR
CCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHH
VSLMAALAYLIMPFDLFPDFMPLVGFSDDFVALTAVLSIWSKYMTPSIRIRAERKLNKLF
HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHC
PFLK
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA