| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
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The map label for this gene is 123965873
Identifier: 123965873
GI number: 123965873
Start: 570956
End: 571306
Strand: Reverse
Name: 123965873
Synonym: P9515_06381
Alternate gene names: NA
Gene position: 571306-570956 (Counterclockwise)
Preceding gene: 123965875
Following gene: 123965869
Centisome position: 33.52
GC content: 39.03
Gene sequence:
>351_bases ATGCTCACTGGTAGCGATCTTCTAGCTAAAGTTAAAGAACTTGGTGATGTTAGCAAGTCAGATCTTGTTCGTGCCTGTGG ATATGTTTCCACAAAAAAGAATGGAACAGAACGTCTAAATTTCACCGCCTTTTACGAAGCACTGCTTGAAGCAAAAGGTA TTAACCTAGGTGATGCTGGAGTTGCAGGAATAGGAAAGGGTGGTAGAAAATTAAGTTACATAGCAACAGTCCAAGGTAAT GGAAATCTTTTAATTGGGAAAGCATATACAGCACTCTTAGACTTGAAAGCAGGAGATGAGTTTGAAATTAAGCTGGGGAG AAAGCAAATAAGATTATTACCAGCTGACTAA
Upstream 100 bases:
>100_bases TTATTAAAAGATAACTAATTTAATAAATACATAATTAATAATTGCACAAATTACACACTAATTGCTATGTTAATTAAGAA TAACTTTGTATTAATTTATT
Downstream 100 bases:
>100_bases TTAAGATAAAGAATTGGTTTAACTATAAAAAAATAAATACTCCCCTATTACGCTAATGATTTTGAATCATATAAGTTTAT AAAAAAAATTTTTTTCTTAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 116; Mature: 116
Protein sequence:
>116_residues MLTGSDLLAKVKELGDVSKSDLVRACGYVSTKKNGTERLNFTAFYEALLEAKGINLGDAGVAGIGKGGRKLSYIATVQGN GNLLIGKAYTALLDLKAGDEFEIKLGRKQIRLLPAD
Sequences:
>Translated_116_residues MLTGSDLLAKVKELGDVSKSDLVRACGYVSTKKNGTERLNFTAFYEALLEAKGINLGDAGVAGIGKGGRKLSYIATVQGN GNLLIGKAYTALLDLKAGDEFEIKLGRKQIRLLPAD >Mature_116_residues MLTGSDLLAKVKELGDVSKSDLVRACGYVSTKKNGTERLNFTAFYEALLEAKGINLGDAGVAGIGKGGRKLSYIATVQGN GNLLIGKAYTALLDLKAGDEFEIKLGRKQIRLLPAD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12288; Mature: 12288
Theoretical pI: Translated: 9.73; Mature: 9.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTGSDLLAKVKELGDVSKSDLVRACGYVSTKKNGTERLNFTAFYEALLEAKGINLGDAG CCCCHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCEEHHHHHHHHHHHHCCCCCCCCC VAGIGKGGRKLSYIATVQGNGNLLIGKAYTALLDLKAGDEFEIKLGRKQIRLLPAD CCCCCCCCCEEEEEEEEECCCCEEEEEHEEEEEECCCCCEEEEEECCEEEEEECCC >Mature Secondary Structure MLTGSDLLAKVKELGDVSKSDLVRACGYVSTKKNGTERLNFTAFYEALLEAKGINLGDAG CCCCHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCEEHHHHHHHHHHHHCCCCCCCCC VAGIGKGGRKLSYIATVQGNGNLLIGKAYTALLDLKAGDEFEIKLGRKQIRLLPAD CCCCCCCCCEEEEEEEEECCCCEEEEEHEEEEEECCCCCEEEEEECCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA