| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
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The map label for this gene is chlL
Identifier: 123965842
GI number: 123965842
Start: 542990
End: 543877
Strand: Reverse
Name: chlL
Synonym: P9515_06071
Alternate gene names: 123965842
Gene position: 543877-542990 (Counterclockwise)
Preceding gene: 123965843
Following gene: 123965838
Centisome position: 31.91
GC content: 37.27
Gene sequence:
>888_bases ATGACAAGTACTATAAATAAACATCTTGATGGAGAAGGCAGCGTTCAGGTCAAGCAAGACCCAAAAGTGAATATTGAAGA AGGAGCATTAGTAATCGCTGTTTATGGCAAAGGAGGTATTGGCAAGTCAACAACATCATCCAACCTTTCCGCAGCATTCT CGAAATTAGGTAAAAAAGTTCTACAAATAGGGTGCGATCCCAAGCACGACAGTACTTTTACTCTGACTCACAAAATGGTA CCAACTGTTATTGATATTTTGGAGGAAGTCGATTTTCATAGCGAGGAGTTAAGACCAACAGACTTTATGTTTGAAGGTTT TAATGGAGTAATGTGCGTAGAGAGTGGCGGTCCCCCAGCTGGTACAGGTTGCGGAGGTTATGTAACAGGACAAACAGTAA AACTTTTAAAAGAGCATCATTTATTAGAAGATACCGATGTAGTTATTTTTGATGTCTTAGGTGATGTTGTTTGCGGAGGT TTTGCAGCCCCCCTACAACATGCTAATTACTGTCTAATTGTTACTGCAAACGACTTTGATTCAATATTTGCGATGAATAG AATTGTTTCTGCAATTAAAGCCAAAGCAAAGAACTATAAAGTCAGATTAGGTGGCGTAGTCGCCAATAGATCCAAAGATA CAGATCAAATTGATAAGTTCAATGATAGAACTGGTTTAAAAACCATGGCTCACTTTAAAGATGTAGATGCTATTAGAAGA TCAAGGCTCAAAAAGTGTACTATTTTTGAAATGGAACCAACTGAAGATGTAATAGAGGTACAAAATGAATATTTATCACT CGCTAAAAATATGTTAGAAAATGTAGAACCACTTGAGGGCACCCCACTGAAAGATAGAGAAATCTTTGATTTATTGGGAT TCGACTAA
Upstream 100 bases:
>100_bases GTATCTTTAATCATAATAAATAACTATTTGTTGAGAAATACATTTCAAGAACCATATACCTGCAAGAATATATATATTAA AGCGTTAATTTCAGTTAAAA
Downstream 100 bases:
>100_bases CTACCCTAATTCAAACCAACTAATTTTCTAGTTAATTCATAAGTTTGTTTTGAAATGTCAGAATCTATTATTCTTTTTGA CAATTTTTGAGAAAAGGCTT
Product: protochlorophyllide reductase iron-sulfur ATP-binding protein
Products: NA
Alternate protein names: DPOR subunit L; LI-POR subunit L
Number of amino acids: Translated: 295; Mature: 294
Protein sequence:
>295_residues MTSTINKHLDGEGSVQVKQDPKVNIEEGALVIAVYGKGGIGKSTTSSNLSAAFSKLGKKVLQIGCDPKHDSTFTLTHKMV PTVIDILEEVDFHSEELRPTDFMFEGFNGVMCVESGGPPAGTGCGGYVTGQTVKLLKEHHLLEDTDVVIFDVLGDVVCGG FAAPLQHANYCLIVTANDFDSIFAMNRIVSAIKAKAKNYKVRLGGVVANRSKDTDQIDKFNDRTGLKTMAHFKDVDAIRR SRLKKCTIFEMEPTEDVIEVQNEYLSLAKNMLENVEPLEGTPLKDREIFDLLGFD
Sequences:
>Translated_295_residues MTSTINKHLDGEGSVQVKQDPKVNIEEGALVIAVYGKGGIGKSTTSSNLSAAFSKLGKKVLQIGCDPKHDSTFTLTHKMV PTVIDILEEVDFHSEELRPTDFMFEGFNGVMCVESGGPPAGTGCGGYVTGQTVKLLKEHHLLEDTDVVIFDVLGDVVCGG FAAPLQHANYCLIVTANDFDSIFAMNRIVSAIKAKAKNYKVRLGGVVANRSKDTDQIDKFNDRTGLKTMAHFKDVDAIRR SRLKKCTIFEMEPTEDVIEVQNEYLSLAKNMLENVEPLEGTPLKDREIFDLLGFD >Mature_294_residues TSTINKHLDGEGSVQVKQDPKVNIEEGALVIAVYGKGGIGKSTTSSNLSAAFSKLGKKVLQIGCDPKHDSTFTLTHKMVP TVIDILEEVDFHSEELRPTDFMFEGFNGVMCVESGGPPAGTGCGGYVTGQTVKLLKEHHLLEDTDVVIFDVLGDVVCGGF AAPLQHANYCLIVTANDFDSIFAMNRIVSAIKAKAKNYKVRLGGVVANRSKDTDQIDKFNDRTGLKTMAHFKDVDAIRRS RLKKCTIFEMEPTEDVIEVQNEYLSLAKNMLENVEPLEGTPLKDREIFDLLGFD
Specific function: Uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent
COG id: COG1348
COG function: function code P; Nitrogenase subunit NifH (ATPase)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the NifH/BchL/ChlL family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): CHLL_PROM5 (A2BVK5)
Other databases:
- EMBL: CP000552 - RefSeq: YP_001010923.1 - STRING: A2BVK5 - GeneID: 4719741 - GenomeReviews: CP000552_GR - KEGG: pmc:P9515_06071 - eggNOG: COG1348 - HOGENOM: HBG488165 - OMA: IPTIIDT - ProtClustDB: PRK13185 - BioCyc: PMAR167542:P9515ORF_0642-MONOMER - HAMAP: MF_00355 - InterPro: IPR000392 - InterPro: IPR005971 - PIRSF: PIRSF000363 - PRINTS: PR00091 - TIGRFAMs: TIGR01281
Pfam domain/function: PF00142 Fer4_NifH
EC number: 1.18.-.-
Molecular weight: Translated: 32319; Mature: 32188
Theoretical pI: Translated: 5.23; Mature: 5.23
Prosite motif: PS00746 NIFH_FRXC_1; PS00692 NIFH_FRXC_2; PS51026 NIFH_FRXC_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSTINKHLDGEGSVQVKQDPKVNIEEGALVIAVYGKGGIGKSTTSSNLSAAFSKLGKKV CCCCCCCCCCCCCCEEECCCCCCEECCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHH LQIGCDPKHDSTFTLTHKMVPTVIDILEEVDFHSEELRPTDFMFEGFNGVMCVESGGPPA HHHCCCCCCCCEEEEHHHHHHHHHHHHHHCCCCHHHCCCCHHEECCCCCEEEEECCCCCC GTGCGGYVTGQTVKLLKEHHLLEDTDVVIFDVLGDVVCGGFAAPLQHANYCLIVTANDFD CCCCCCCCCHHHHHHHHHHCCCCCCCEEHHHHHHHHHHCCHHHHHCCCCEEEEEECCCHH SIFAMNRIVSAIKAKAKNYKVRLGGVVANRSKDTDQIDKFNDRTGLKTMAHFKDVDAIRR HHHHHHHHHHHHHHHHCCEEEEEEEEEECCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHH SRLKKCTIFEMEPTEDVIEVQNEYLSLAKNMLENVEPLEGTPLKDREIFDLLGFD HHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCC >Mature Secondary Structure TSTINKHLDGEGSVQVKQDPKVNIEEGALVIAVYGKGGIGKSTTSSNLSAAFSKLGKKV CCCCCCCCCCCCCEEECCCCCCEECCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHH LQIGCDPKHDSTFTLTHKMVPTVIDILEEVDFHSEELRPTDFMFEGFNGVMCVESGGPPA HHHCCCCCCCCEEEEHHHHHHHHHHHHHHCCCCHHHCCCCHHEECCCCCEEEEECCCCCC GTGCGGYVTGQTVKLLKEHHLLEDTDVVIFDVLGDVVCGGFAAPLQHANYCLIVTANDFD CCCCCCCCCHHHHHHHHHHCCCCCCCEEHHHHHHHHHHCCHHHHHCCCCEEEEEECCCHH SIFAMNRIVSAIKAKAKNYKVRLGGVVANRSKDTDQIDKFNDRTGLKTMAHFKDVDAIRR HHHHHHHHHHHHHHHHCCEEEEEEEEEECCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHH SRLKKCTIFEMEPTEDVIEVQNEYLSLAKNMLENVEPLEGTPLKDREIFDLLGFD HHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA