| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
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The map label for this gene is 123965832
Identifier: 123965832
GI number: 123965832
Start: 534924
End: 535964
Strand: Direct
Name: 123965832
Synonym: P9515_05971
Alternate gene names: NA
Gene position: 534924-535964 (Clockwise)
Preceding gene: 123965831
Following gene: 123965833
Centisome position: 31.39
GC content: 35.93
Gene sequence:
>1041_bases ATGTTTGGGCTTATTGGTCATTCAACTAGTTTTGAGGATGCAAAAAGAAAAGCTTCATTATTGGGCTTTGACCATATTGC TGATGGAGATTTGGATGTGTGGTGCACAGCTCCACCTCAATTAGTTGAAAATGTTGAGGTGAAAAGTGCTACAGGAATAT CAATTGAAGGTTCTTACATTGATTCATGTTTTGTTCCTGAAATGCTTTCTAGATTTAAAACAGCACGAAGAAAAGTTTTG AATGCTATGGAATTAGCTCAAAAAAAAGGCATTAATATCACTGCTTTAGGAGGTTTCACTTCTATTATCTTTGAGAATTT TAATCTCCTTCAACATAAGCAGATTAGGAATACCTCTTTAGAGTGGGAAAGATTCACAACTGGTAATACTCATACTGCTT GGGTTATTTGCCGACAGTTAGAGATAAATGCTCCTAAGGTAGGGATCGAACTTAAAAAAGCAACTGTTGCTGTTGTTGGT GCTACAGGTGATATAGGCAGTGCTGTTTGTCGATGGTTAATTAATAAAACAGGTATTGGGGAACTTCTTTTGGTAGCAAG ACAAAAGGAACCTTTGGATAATTTACAGAAGGAATTAGATGGAGGAACTATCAAAAGTTTGGATGAGGCATTACCCGAGG CAGATATTGTTGTATGGGTAGCAAGTATGCCAAAGACCATGGAAATTAATACAAATAATCTTAAACAACCATGTTTAATG ATTGATGGAGGATATCCAAAGAATCTCGATGAAAAATTCCAAGGTAATAATATACATGTTGTTAAAGGAGGTATTGTGAA ATTCTTCAATGATATAGGCTGGAATATGATGGAATTAGCGGAAATGCAAAATCCCCAGAGAGAAATGTTTGCCTGTTTTG CAGAGGCTATGATTTTAGAATTTGAAAAATGTCATACTAACTTTAGTTGGGGAAGAAACAATATATCCCTTGAAAAGATG GAGTTCATTGGAGCTGCTTCTGTGAAACACGGATTCTCTGCTATTGGCCTTGATAAACATCCAAAAGTATTAGCAGTTTG A
Upstream 100 bases:
>100_bases AATTTACATATATACTTCATAGTTATTTTTTATTTCTTTTAAGTAAATAGCTCTATGCTATTGTTCATAAGAATAAATAG TTTTACTTAATAAATTATCC
Downstream 100 bases:
>100_bases ACCATGCCAAGACGTTATCTTCTAGATTTTGAAAAACCTCTTGTGGAGCTTGAGAAGCAAATCGAGCAAATTAGAGAATT AGCTAGAGATTCAGAAGTAG
Product: dehydrogenase
Products: NA
Alternate protein names: Dehydrogenase; Acyl-ACP Reductase; Aminotransferase Class-III; Dehydrogenase Like; Shikimate / Quinate 5-Dehydrogenase Domain Protein; Dehydrogenase Like Protein
Number of amino acids: Translated: 346; Mature: 346
Protein sequence:
>346_residues MFGLIGHSTSFEDAKRKASLLGFDHIADGDLDVWCTAPPQLVENVEVKSATGISIEGSYIDSCFVPEMLSRFKTARRKVL NAMELAQKKGINITALGGFTSIIFENFNLLQHKQIRNTSLEWERFTTGNTHTAWVICRQLEINAPKVGIELKKATVAVVG ATGDIGSAVCRWLINKTGIGELLLVARQKEPLDNLQKELDGGTIKSLDEALPEADIVVWVASMPKTMEINTNNLKQPCLM IDGGYPKNLDEKFQGNNIHVVKGGIVKFFNDIGWNMMELAEMQNPQREMFACFAEAMILEFEKCHTNFSWGRNNISLEKM EFIGAASVKHGFSAIGLDKHPKVLAV
Sequences:
>Translated_346_residues MFGLIGHSTSFEDAKRKASLLGFDHIADGDLDVWCTAPPQLVENVEVKSATGISIEGSYIDSCFVPEMLSRFKTARRKVL NAMELAQKKGINITALGGFTSIIFENFNLLQHKQIRNTSLEWERFTTGNTHTAWVICRQLEINAPKVGIELKKATVAVVG ATGDIGSAVCRWLINKTGIGELLLVARQKEPLDNLQKELDGGTIKSLDEALPEADIVVWVASMPKTMEINTNNLKQPCLM IDGGYPKNLDEKFQGNNIHVVKGGIVKFFNDIGWNMMELAEMQNPQREMFACFAEAMILEFEKCHTNFSWGRNNISLEKM EFIGAASVKHGFSAIGLDKHPKVLAV >Mature_346_residues MFGLIGHSTSFEDAKRKASLLGFDHIADGDLDVWCTAPPQLVENVEVKSATGISIEGSYIDSCFVPEMLSRFKTARRKVL NAMELAQKKGINITALGGFTSIIFENFNLLQHKQIRNTSLEWERFTTGNTHTAWVICRQLEINAPKVGIELKKATVAVVG ATGDIGSAVCRWLINKTGIGELLLVARQKEPLDNLQKELDGGTIKSLDEALPEADIVVWVASMPKTMEINTNNLKQPCLM IDGGYPKNLDEKFQGNNIHVVKGGIVKFFNDIGWNMMELAEMQNPQREMFACFAEAMILEFEKCHTNFSWGRNNISLEKM EFIGAASVKHGFSAIGLDKHPKVLAV
Specific function: Unknown
COG id: COG5322
COG function: function code R; Predicted dehydrogenase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38374; Mature: 38374
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFGLIGHSTSFEDAKRKASLLGFDHIADGDLDVWCTAPPQLVENVEVKSATGISIEGSYI CCCCCCCCCCHHHHHHHHHHHCCHHCCCCCEEEEECCCHHHHHCCCCCCCCCCEEECCCC DSCFVPEMLSRFKTARRKVLNAMELAQKKGINITALGGFTSIIFENFNLLQHKQIRNTSL CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECHHHHHHHHCCCHHHHHHHHCCCC EWERFTTGNTHTAWVICRQLEINAPKVGIELKKATVAVVGATGDIGSAVCRWLINKTGIG CEEEECCCCCEEEEEEEEEEECCCCCCCEEEEEEEEEEEECCCCHHHHHHHHHHCCCCCC ELLLVARQKEPLDNLQKELDGGTIKSLDEALPEADIVVWVASMPKTMEINTNNLKQPCLM CEEEEECCCCHHHHHHHHHCCCHHHHHHHHCCCCCEEEEEECCCCEEEECCCCCCCCEEE IDGGYPKNLDEKFQGNNIHVVKGGIVKFFNDIGWNMMELAEMQNPQREMFACFAEAMILE EECCCCCCCHHHCCCCCEEEEECHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHH FEKCHTNFSWGRNNISLEKMEFIGAASVKHGFSAIGLDKHPKVLAV HHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCEECCCCCCCCEEEC >Mature Secondary Structure MFGLIGHSTSFEDAKRKASLLGFDHIADGDLDVWCTAPPQLVENVEVKSATGISIEGSYI CCCCCCCCCCHHHHHHHHHHHCCHHCCCCCEEEEECCCHHHHHCCCCCCCCCCEEECCCC DSCFVPEMLSRFKTARRKVLNAMELAQKKGINITALGGFTSIIFENFNLLQHKQIRNTSL CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECHHHHHHHHCCCHHHHHHHHCCCC EWERFTTGNTHTAWVICRQLEINAPKVGIELKKATVAVVGATGDIGSAVCRWLINKTGIG CEEEECCCCCEEEEEEEEEEECCCCCCCEEEEEEEEEEEECCCCHHHHHHHHHHCCCCCC ELLLVARQKEPLDNLQKELDGGTIKSLDEALPEADIVVWVASMPKTMEINTNNLKQPCLM CEEEEECCCCHHHHHHHHHCCCHHHHHHHHCCCCCEEEEEECCCCEEEECCCCCCCCEEE IDGGYPKNLDEKFQGNNIHVVKGGIVKFFNDIGWNMMELAEMQNPQREMFACFAEAMILE EECCCCCCCHHHCCCCCEEEEECHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHH FEKCHTNFSWGRNNISLEKMEFIGAASVKHGFSAIGLDKHPKVLAV HHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCEECCCCCCCCEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA