Definition Prochlorococcus marinus str. MIT 9515, complete genome.
Accession NC_008817
Length 1,704,176

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The map label for this gene is 123965832

Identifier: 123965832

GI number: 123965832

Start: 534924

End: 535964

Strand: Direct

Name: 123965832

Synonym: P9515_05971

Alternate gene names: NA

Gene position: 534924-535964 (Clockwise)

Preceding gene: 123965831

Following gene: 123965833

Centisome position: 31.39

GC content: 35.93

Gene sequence:

>1041_bases
ATGTTTGGGCTTATTGGTCATTCAACTAGTTTTGAGGATGCAAAAAGAAAAGCTTCATTATTGGGCTTTGACCATATTGC
TGATGGAGATTTGGATGTGTGGTGCACAGCTCCACCTCAATTAGTTGAAAATGTTGAGGTGAAAAGTGCTACAGGAATAT
CAATTGAAGGTTCTTACATTGATTCATGTTTTGTTCCTGAAATGCTTTCTAGATTTAAAACAGCACGAAGAAAAGTTTTG
AATGCTATGGAATTAGCTCAAAAAAAAGGCATTAATATCACTGCTTTAGGAGGTTTCACTTCTATTATCTTTGAGAATTT
TAATCTCCTTCAACATAAGCAGATTAGGAATACCTCTTTAGAGTGGGAAAGATTCACAACTGGTAATACTCATACTGCTT
GGGTTATTTGCCGACAGTTAGAGATAAATGCTCCTAAGGTAGGGATCGAACTTAAAAAAGCAACTGTTGCTGTTGTTGGT
GCTACAGGTGATATAGGCAGTGCTGTTTGTCGATGGTTAATTAATAAAACAGGTATTGGGGAACTTCTTTTGGTAGCAAG
ACAAAAGGAACCTTTGGATAATTTACAGAAGGAATTAGATGGAGGAACTATCAAAAGTTTGGATGAGGCATTACCCGAGG
CAGATATTGTTGTATGGGTAGCAAGTATGCCAAAGACCATGGAAATTAATACAAATAATCTTAAACAACCATGTTTAATG
ATTGATGGAGGATATCCAAAGAATCTCGATGAAAAATTCCAAGGTAATAATATACATGTTGTTAAAGGAGGTATTGTGAA
ATTCTTCAATGATATAGGCTGGAATATGATGGAATTAGCGGAAATGCAAAATCCCCAGAGAGAAATGTTTGCCTGTTTTG
CAGAGGCTATGATTTTAGAATTTGAAAAATGTCATACTAACTTTAGTTGGGGAAGAAACAATATATCCCTTGAAAAGATG
GAGTTCATTGGAGCTGCTTCTGTGAAACACGGATTCTCTGCTATTGGCCTTGATAAACATCCAAAAGTATTAGCAGTTTG
A

Upstream 100 bases:

>100_bases
AATTTACATATATACTTCATAGTTATTTTTTATTTCTTTTAAGTAAATAGCTCTATGCTATTGTTCATAAGAATAAATAG
TTTTACTTAATAAATTATCC

Downstream 100 bases:

>100_bases
ACCATGCCAAGACGTTATCTTCTAGATTTTGAAAAACCTCTTGTGGAGCTTGAGAAGCAAATCGAGCAAATTAGAGAATT
AGCTAGAGATTCAGAAGTAG

Product: dehydrogenase

Products: NA

Alternate protein names: Dehydrogenase; Acyl-ACP Reductase; Aminotransferase Class-III; Dehydrogenase Like; Shikimate / Quinate 5-Dehydrogenase Domain Protein; Dehydrogenase Like Protein

Number of amino acids: Translated: 346; Mature: 346

Protein sequence:

>346_residues
MFGLIGHSTSFEDAKRKASLLGFDHIADGDLDVWCTAPPQLVENVEVKSATGISIEGSYIDSCFVPEMLSRFKTARRKVL
NAMELAQKKGINITALGGFTSIIFENFNLLQHKQIRNTSLEWERFTTGNTHTAWVICRQLEINAPKVGIELKKATVAVVG
ATGDIGSAVCRWLINKTGIGELLLVARQKEPLDNLQKELDGGTIKSLDEALPEADIVVWVASMPKTMEINTNNLKQPCLM
IDGGYPKNLDEKFQGNNIHVVKGGIVKFFNDIGWNMMELAEMQNPQREMFACFAEAMILEFEKCHTNFSWGRNNISLEKM
EFIGAASVKHGFSAIGLDKHPKVLAV

Sequences:

>Translated_346_residues
MFGLIGHSTSFEDAKRKASLLGFDHIADGDLDVWCTAPPQLVENVEVKSATGISIEGSYIDSCFVPEMLSRFKTARRKVL
NAMELAQKKGINITALGGFTSIIFENFNLLQHKQIRNTSLEWERFTTGNTHTAWVICRQLEINAPKVGIELKKATVAVVG
ATGDIGSAVCRWLINKTGIGELLLVARQKEPLDNLQKELDGGTIKSLDEALPEADIVVWVASMPKTMEINTNNLKQPCLM
IDGGYPKNLDEKFQGNNIHVVKGGIVKFFNDIGWNMMELAEMQNPQREMFACFAEAMILEFEKCHTNFSWGRNNISLEKM
EFIGAASVKHGFSAIGLDKHPKVLAV
>Mature_346_residues
MFGLIGHSTSFEDAKRKASLLGFDHIADGDLDVWCTAPPQLVENVEVKSATGISIEGSYIDSCFVPEMLSRFKTARRKVL
NAMELAQKKGINITALGGFTSIIFENFNLLQHKQIRNTSLEWERFTTGNTHTAWVICRQLEINAPKVGIELKKATVAVVG
ATGDIGSAVCRWLINKTGIGELLLVARQKEPLDNLQKELDGGTIKSLDEALPEADIVVWVASMPKTMEINTNNLKQPCLM
IDGGYPKNLDEKFQGNNIHVVKGGIVKFFNDIGWNMMELAEMQNPQREMFACFAEAMILEFEKCHTNFSWGRNNISLEKM
EFIGAASVKHGFSAIGLDKHPKVLAV

Specific function: Unknown

COG id: COG5322

COG function: function code R; Predicted dehydrogenase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38374; Mature: 38374

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFGLIGHSTSFEDAKRKASLLGFDHIADGDLDVWCTAPPQLVENVEVKSATGISIEGSYI
CCCCCCCCCCHHHHHHHHHHHCCHHCCCCCEEEEECCCHHHHHCCCCCCCCCCEEECCCC
DSCFVPEMLSRFKTARRKVLNAMELAQKKGINITALGGFTSIIFENFNLLQHKQIRNTSL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECHHHHHHHHCCCHHHHHHHHCCCC
EWERFTTGNTHTAWVICRQLEINAPKVGIELKKATVAVVGATGDIGSAVCRWLINKTGIG
CEEEECCCCCEEEEEEEEEEECCCCCCCEEEEEEEEEEEECCCCHHHHHHHHHHCCCCCC
ELLLVARQKEPLDNLQKELDGGTIKSLDEALPEADIVVWVASMPKTMEINTNNLKQPCLM
CEEEEECCCCHHHHHHHHHCCCHHHHHHHHCCCCCEEEEEECCCCEEEECCCCCCCCEEE
IDGGYPKNLDEKFQGNNIHVVKGGIVKFFNDIGWNMMELAEMQNPQREMFACFAEAMILE
EECCCCCCCHHHCCCCCEEEEECHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHH
FEKCHTNFSWGRNNISLEKMEFIGAASVKHGFSAIGLDKHPKVLAV
HHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCEECCCCCCCCEEEC
>Mature Secondary Structure
MFGLIGHSTSFEDAKRKASLLGFDHIADGDLDVWCTAPPQLVENVEVKSATGISIEGSYI
CCCCCCCCCCHHHHHHHHHHHCCHHCCCCCEEEEECCCHHHHHCCCCCCCCCCEEECCCC
DSCFVPEMLSRFKTARRKVLNAMELAQKKGINITALGGFTSIIFENFNLLQHKQIRNTSL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECHHHHHHHHCCCHHHHHHHHCCCC
EWERFTTGNTHTAWVICRQLEINAPKVGIELKKATVAVVGATGDIGSAVCRWLINKTGIG
CEEEECCCCCEEEEEEEEEEECCCCCCCEEEEEEEEEEEECCCCHHHHHHHHHHCCCCCC
ELLLVARQKEPLDNLQKELDGGTIKSLDEALPEADIVVWVASMPKTMEINTNNLKQPCLM
CEEEEECCCCHHHHHHHHHCCCHHHHHHHHCCCCCEEEEEECCCCEEEECCCCCCCCEEE
IDGGYPKNLDEKFQGNNIHVVKGGIVKFFNDIGWNMMELAEMQNPQREMFACFAEAMILE
EECCCCCCCHHHCCCCCEEEEECHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHH
FEKCHTNFSWGRNNISLEKMEFIGAASVKHGFSAIGLDKHPKVLAV
HHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCEECCCCCCCCEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA