| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
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The map label for this gene is 123965831
Identifier: 123965831
GI number: 123965831
Start: 534083
End: 534814
Strand: Direct
Name: 123965831
Synonym: P9515_05961
Alternate gene names: NA
Gene position: 534083-534814 (Clockwise)
Preceding gene: 123965830
Following gene: 123965832
Centisome position: 31.34
GC content: 35.11
Gene sequence:
>732_bases ATGCAAACTCTAGAATCTAATAAAAACATCCAAATAGGCTCATCACCTGAAAGTGATTCAGCTAATCTTCCTGATTTTAC AACAGATGCTTACAAAGATGCATACAGTAGGATTAATGCGATAGTTATTGAGGGTGAACAAGAAGCTTATGACAACTACA TTTCAATTGCGACTCTTTTACCCAATGATTCGGAAGAATTAACAAAATTGGCCAAAATGGAGCTAAAACATAAAAGAGGT TTTACGGCTTGTGGTAAAAATTTGGGAGTAGAAGCAGATATGTCTTTTGCCAAGGAATTCTTTTCAAAACTACACGGTAA TTTTCAGGCAGCGTTAAAGAATGAGAGTTTAACTACTTGTCTTCTAATACAAGCCATTTTAATTGAAGCTTTTGCAATTT CTGCTTATCACGTTTACATAAGGGTTGCTGATCCATTCGCAAAAAAAATTACTCAGGGTGTGGTTAATGATGAATATCTC CATTTGAATTATGGTGAGAAATGGCTCAAAGAAAATCTTAGTACATGCAAAGATGAGTTAATCGCTGCTAACAAAGTTAA TCTTCCTATTATAAAAAAGATGCTTGATCAAGTCGCAGATGATGCGGCTACCTTGGCTATGGATAAAGAAGAGTTGATGG AAGAATTCATGATTGCTTATCAAGACGCACTTCTAGAAATGGGTTTAGATAATAGAGAGATAGCAAGAATGGCAATGGCA GCAATTGTTTAA
Upstream 100 bases:
>100_bases TTAATGAATAAGTTTAAAATTGAAACTATTTCCATCATATATTTATATTTTCATTATAATTGTGTAAAATCATCGCAAAT TGATCAAAAGCTTTTCTGAA
Downstream 100 bases:
>100_bases ATAATTAAGAATTTACATATATACTTCATAGTTATTTTTTATTTCTTTTAAGTAAATAGCTCTATGCTATTGTTCATAAG AATAAATAGTTTTACTTAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 243; Mature: 243
Protein sequence:
>243_residues MQTLESNKNIQIGSSPESDSANLPDFTTDAYKDAYSRINAIVIEGEQEAYDNYISIATLLPNDSEELTKLAKMELKHKRG FTACGKNLGVEADMSFAKEFFSKLHGNFQAALKNESLTTCLLIQAILIEAFAISAYHVYIRVADPFAKKITQGVVNDEYL HLNYGEKWLKENLSTCKDELIAANKVNLPIIKKMLDQVADDAATLAMDKEELMEEFMIAYQDALLEMGLDNREIARMAMA AIV
Sequences:
>Translated_243_residues MQTLESNKNIQIGSSPESDSANLPDFTTDAYKDAYSRINAIVIEGEQEAYDNYISIATLLPNDSEELTKLAKMELKHKRG FTACGKNLGVEADMSFAKEFFSKLHGNFQAALKNESLTTCLLIQAILIEAFAISAYHVYIRVADPFAKKITQGVVNDEYL HLNYGEKWLKENLSTCKDELIAANKVNLPIIKKMLDQVADDAATLAMDKEELMEEFMIAYQDALLEMGLDNREIARMAMA AIV >Mature_243_residues MQTLESNKNIQIGSSPESDSANLPDFTTDAYKDAYSRINAIVIEGEQEAYDNYISIATLLPNDSEELTKLAKMELKHKRG FTACGKNLGVEADMSFAKEFFSKLHGNFQAALKNESLTTCLLIQAILIEAFAISAYHVYIRVADPFAKKITQGVVNDEYL HLNYGEKWLKENLSTCKDELIAANKVNLPIIKKMLDQVADDAATLAMDKEELMEEFMIAYQDALLEMGLDNREIARMAMA AIV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27162; Mature: 27162
Theoretical pI: Translated: 4.47; Mature: 4.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQTLESNKNIQIGSSPESDSANLPDFTTDAYKDAYSRINAIVIEGEQEAYDNYISIATLL CCCCCCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHCEEEEECCHHHHHCCEEEEEEC PNDSEELTKLAKMELKHKRGFTACGKNLGVEADMSFAKEFFSKLHGNFQAALKNESLTTC CCCHHHHHHHHHHHHHHHCCCHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHHCCCCHHHH LLIQAILIEAFAISAYHVYIRVADPFAKKITQGVVNDEYLHLNYGEKWLKENLSTCKDEL HHHHHHHHHHHHHHEEEEEEEECCHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHH IAANKVNLPIIKKMLDQVADDAATLAMDKEELMEEFMIAYQDALLEMGLDNREIARMAMA HHCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH AIV HCC >Mature Secondary Structure MQTLESNKNIQIGSSPESDSANLPDFTTDAYKDAYSRINAIVIEGEQEAYDNYISIATLL CCCCCCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHCEEEEECCHHHHHCCEEEEEEC PNDSEELTKLAKMELKHKRGFTACGKNLGVEADMSFAKEFFSKLHGNFQAALKNESLTTC CCCHHHHHHHHHHHHHHHCCCHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHHCCCCHHHH LLIQAILIEAFAISAYHVYIRVADPFAKKITQGVVNDEYLHLNYGEKWLKENLSTCKDEL HHHHHHHHHHHHHHEEEEEEEECCHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHH IAANKVNLPIIKKMLDQVADDAATLAMDKEELMEEFMIAYQDALLEMGLDNREIARMAMA HHCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH AIV HCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA