Definition Prochlorococcus marinus str. MIT 9515, complete genome.
Accession NC_008817
Length 1,704,176

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The map label for this gene is 123965828

Identifier: 123965828

GI number: 123965828

Start: 530994

End: 531899

Strand: Reverse

Name: 123965828

Synonym: P9515_05931

Alternate gene names: NA

Gene position: 531899-530994 (Counterclockwise)

Preceding gene: 123965829

Following gene: 123965827

Centisome position: 31.21

GC content: 32.67

Gene sequence:

>906_bases
ATGACTCCCAATAAAAAAATCGATTCGATTCAAAATTTTAAAAAATCAGATTGGGAATTGGACTTTTATTCGAGGCCTAT
TATTGAAAAAAACGGTAAAAAAAGATGGGAATTAATTATTTCATCTTCAAAAACCTTCAAAACAGAGGATATATTTCTTT
GGAATAAAATATGCCCCGCAAACGAGGTTAATTCGATATGGCTTACAAAATCATTAAATGAAGCGCTAAACGACGCCGAA
AGAAAGGGTTGGGAGAAACCCTCGAAGATAAGATTTTGGAGAGCATCAATGAAATCCATAATTAAGAAATCTATTGAGAA
TATTGGAATTGAGGCTCTTGTTAGTAGAAGGACATATGAATTATTTGATAGAATTGAATTTCTAGAAAAAGAGGTTTACC
CTCTCGAGAATGGATATGTAAGAGGAGTATTGGCTCCGACTTTCACATCAAGAATTGCTAATGATCCCACTCCTTTGCCT
GAAGCAGTGAGAGGTGATGCATTAACAATTTCAGAAATATCTATAGAGGAATTAAAATCTGCTGAAAATTGGCCTATTGA
ATTTGGAGATATTTTTCCAATCAAAAAGTCTCTTAAAAATGAGAACTTAGTGCCTGGTCTTAGACTTTTTAGTAAAGAAA
GATCACTAGCTCTGGCCGCTTGGTTTAGCAGTTTAGAACCAGTCAAGCTGCATATCGAAAAGAATCAACTCATACTTGAG
GCCTCAGAAGATAATAAATGGTTGGTAACAGATTTATCAGAAAAAGTTGCCAAGGAATTAAATAATAAATTCACTCAAAA
TAAAAATGATTCTTTTGGATATCAGTTTATTTCAATACAATCAACTCCTTTTATTGAAAAATTCGCAGGATTCTGGATTT
TAAGAGATATTGAATTGATTTCATAA

Upstream 100 bases:

>100_bases
TCTCCTGGAGAATTAATCGTTGATAAAGGAAAAGTTATGCTTGAAGCCTCTGAAAGAGCTCTCAAAGCAAAAGCACTTTT
CGATAAAAAAAACTTACAAA

Downstream 100 bases:

>100_bases
TGGAAGGACAATGGATGATAATCAACAAAAATTTCAAGAAAAAGACCTAAAAATAAAAGATAAATCTTTTAAATATTTTT
TATCTCCTATTTTTGTTGAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 301; Mature: 300

Protein sequence:

>301_residues
MTPNKKIDSIQNFKKSDWELDFYSRPIIEKNGKKRWELIISSSKTFKTEDIFLWNKICPANEVNSIWLTKSLNEALNDAE
RKGWEKPSKIRFWRASMKSIIKKSIENIGIEALVSRRTYELFDRIEFLEKEVYPLENGYVRGVLAPTFTSRIANDPTPLP
EAVRGDALTISEISIEELKSAENWPIEFGDIFPIKKSLKNENLVPGLRLFSKERSLALAAWFSSLEPVKLHIEKNQLILE
ASEDNKWLVTDLSEKVAKELNNKFTQNKNDSFGYQFISIQSTPFIEKFAGFWILRDIELIS

Sequences:

>Translated_301_residues
MTPNKKIDSIQNFKKSDWELDFYSRPIIEKNGKKRWELIISSSKTFKTEDIFLWNKICPANEVNSIWLTKSLNEALNDAE
RKGWEKPSKIRFWRASMKSIIKKSIENIGIEALVSRRTYELFDRIEFLEKEVYPLENGYVRGVLAPTFTSRIANDPTPLP
EAVRGDALTISEISIEELKSAENWPIEFGDIFPIKKSLKNENLVPGLRLFSKERSLALAAWFSSLEPVKLHIEKNQLILE
ASEDNKWLVTDLSEKVAKELNNKFTQNKNDSFGYQFISIQSTPFIEKFAGFWILRDIELIS
>Mature_300_residues
TPNKKIDSIQNFKKSDWELDFYSRPIIEKNGKKRWELIISSSKTFKTEDIFLWNKICPANEVNSIWLTKSLNEALNDAER
KGWEKPSKIRFWRASMKSIIKKSIENIGIEALVSRRTYELFDRIEFLEKEVYPLENGYVRGVLAPTFTSRIANDPTPLPE
AVRGDALTISEISIEELKSAENWPIEFGDIFPIKKSLKNENLVPGLRLFSKERSLALAAWFSSLEPVKLHIEKNQLILEA
SEDNKWLVTDLSEKVAKELNNKFTQNKNDSFGYQFISIQSTPFIEKFAGFWILRDIELIS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34929; Mature: 34798

Theoretical pI: Translated: 8.38; Mature: 8.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPNKKIDSIQNFKKSDWELDFYSRPIIEKNGKKRWELIISSSKTFKTEDIFLWNKICPA
CCCCCHHHHHHHHCCCCCEEECCCCCCCCCCCCEEEEEEEECCCCCCCCEEEEEECCCCC
NEVNSIWLTKSLNEALNDAERKGWEKPSKIRFWRASMKSIIKKSIENIGIEALVSRRTYE
CCCCCEEEHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
LFDRIEFLEKEVYPLENGYVRGVLAPTFTSRIANDPTPLPEAVRGDALTISEISIEELKS
HHHHHHHHHHHCCCCCCCEEEEEECHHHHHHHCCCCCCCCHHHCCCCEEEECCCHHHHHC
AENWPIEFGDIFPIKKSLKNENLVPGLRLFSKERSLALAAWFSSLEPVKLHIEKNQLILE
CCCCCEECCCCCHHHHHCCCCCCCCHHHHHHHCCHHHHHHHHCCCCCEEEEEECCEEEEE
ASEDNKWLVTDLSEKVAKELNNKFTQNKNDSFGYQFISIQSTPFIEKFAGFWILRDIELI
ECCCCCEEEEHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCHHHHHHCCCEEEEEEEC
S
C
>Mature Secondary Structure 
TPNKKIDSIQNFKKSDWELDFYSRPIIEKNGKKRWELIISSSKTFKTEDIFLWNKICPA
CCCCHHHHHHHHCCCCCEEECCCCCCCCCCCCEEEEEEEECCCCCCCCEEEEEECCCCC
NEVNSIWLTKSLNEALNDAERKGWEKPSKIRFWRASMKSIIKKSIENIGIEALVSRRTYE
CCCCCEEEHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
LFDRIEFLEKEVYPLENGYVRGVLAPTFTSRIANDPTPLPEAVRGDALTISEISIEELKS
HHHHHHHHHHHCCCCCCCEEEEEECHHHHHHHCCCCCCCCHHHCCCCEEEECCCHHHHHC
AENWPIEFGDIFPIKKSLKNENLVPGLRLFSKERSLALAAWFSSLEPVKLHIEKNQLILE
CCCCCEECCCCCHHHHHCCCCCCCCHHHHHHHCCHHHHHHHHCCCCCEEEEEECCEEEEE
ASEDNKWLVTDLSEKVAKELNNKFTQNKNDSFGYQFISIQSTPFIEKFAGFWILRDIELI
ECCCCCEEEEHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCHHHHHHCCCEEEEEEEC
S
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA