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The map label for this gene is yfiH [C]

Identifier: 123965827

GI number: 123965827

Start: 530201

End: 530983

Strand: Reverse

Name: yfiH [C]

Synonym: P9515_05921

Alternate gene names: 123965827

Gene position: 530983-530201 (Counterclockwise)

Preceding gene: 123965828

Following gene: 123965823

Centisome position: 31.16

GC content: 26.69

Gene sequence:

>783_bases
ATGGATGATAATCAACAAAAATTTCAAGAAAAAGACCTAAAAATAAAAGATAAATCTTTTAAATATTTTTTATCTCCTAT
TTTTGTTGAAAATAATTTTAAACATGGGTTTTTTACAAAAACAAGTTCTGAAACCAATCTATCAGTCTTATCAAAACAGC
TTAATGAAAATAATAAGGATTGCATTTTAAATCAAATTCATAGCAATCAAATTGTATTTGGATCTGAGACCCAAGGAAGC
GAAATTGAAGAAGCAGATGGTATTTTTAGCGACAAACACAACCAAACTTTATGGATTTATACAGCAGACTGTATGCCAAT
TTTGTTTGCTGACAAAAGCAAAAGACAGGTTGGGGCAATACATTGTGGAAGAAAAGGTTTAGAAAACAAAATAATAAAAA
ATATTATCGATAAATTTTATAATAATGGTTGTTCAAATGAAGATTTAATTGTGGCAATAGGACCATCAATATCAAAAAAA
TATTATTTGGTAGATAATAAAACCCTAGAAAATTTTTATAGATATGTTCCTCATAATGAATCAATTTCCTTGATAGATAA
TTTGCCTACTTTATTTAAGTTAAAAAAATTAGTTAATAATAAAAATAAAGTTTTAAATGCATTAGATCTAAAAAAATATG
CTCATCTTCAACTTATTAACGAAAAGATCCCAAAAAAGAATATTGATATCTCCGACTTATGCACCTACGAATCAAATTAT
GACTTTCATTCTTGGAGAAGATCTAAGACCTATTCACGTCAATGGAGTTTCATAAGTCCTTAG

Upstream 100 bases:

>100_bases
GGATATCAGTTTATTTCAATACAATCAACTCCTTTTATTGAAAAATTCGCAGGATTCTGGATTTTAAGAGATATTGAATT
GATTTCATAATGGAAGGACA

Downstream 100 bases:

>100_bases
AAAACTTTAATTTTGACAGTTCTCTTTTAATAAATCTTTTGCAAATAACAATTCTGACATTTCCTTAGTTTCATTAATAT
CAAAAACCCTTGCTAATAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 260; Mature: 260

Protein sequence:

>260_residues
MDDNQQKFQEKDLKIKDKSFKYFLSPIFVENNFKHGFFTKTSSETNLSVLSKQLNENNKDCILNQIHSNQIVFGSETQGS
EIEEADGIFSDKHNQTLWIYTADCMPILFADKSKRQVGAIHCGRKGLENKIIKNIIDKFYNNGCSNEDLIVAIGPSISKK
YYLVDNKTLENFYRYVPHNESISLIDNLPTLFKLKKLVNNKNKVLNALDLKKYAHLQLINEKIPKKNIDISDLCTYESNY
DFHSWRRSKTYSRQWSFISP

Sequences:

>Translated_260_residues
MDDNQQKFQEKDLKIKDKSFKYFLSPIFVENNFKHGFFTKTSSETNLSVLSKQLNENNKDCILNQIHSNQIVFGSETQGS
EIEEADGIFSDKHNQTLWIYTADCMPILFADKSKRQVGAIHCGRKGLENKIIKNIIDKFYNNGCSNEDLIVAIGPSISKK
YYLVDNKTLENFYRYVPHNESISLIDNLPTLFKLKKLVNNKNKVLNALDLKKYAHLQLINEKIPKKNIDISDLCTYESNY
DFHSWRRSKTYSRQWSFISP
>Mature_260_residues
MDDNQQKFQEKDLKIKDKSFKYFLSPIFVENNFKHGFFTKTSSETNLSVLSKQLNENNKDCILNQIHSNQIVFGSETQGS
EIEEADGIFSDKHNQTLWIYTADCMPILFADKSKRQVGAIHCGRKGLENKIIKNIIDKFYNNGCSNEDLIVAIGPSISKK
YYLVDNKTLENFYRYVPHNESISLIDNLPTLFKLKKLVNNKNKVLNALDLKKYAHLQLINEKIPKKNIDISDLCTYESNY
DFHSWRRSKTYSRQWSFISP

Specific function: Unknown

COG id: COG1496

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0124 family [H]

Homologues:

Organism=Escherichia coli, GI1788945, Length=216, Percent_Identity=27.7777777777778, Blast_Score=80, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003730
- InterPro:   IPR011324 [H]

Pfam domain/function: PF02578 Cu-oxidase_4 [H]

EC number: NA

Molecular weight: Translated: 30284; Mature: 30284

Theoretical pI: Translated: 9.04; Mature: 9.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDDNQQKFQEKDLKIKDKSFKYFLSPIFVENNFKHGFFTKTSSETNLSVLSKQLNENNKD
CCCCHHHHHHHCCEEECCCHHEECCEEEEECCCCCCEEECCCCCCHHHHHHHHHCCCCCC
CILNQIHSNQIVFGSETQGSEIEEADGIFSDKHNQTLWIYTADCMPILFADKSKRQVGAI
HHHEECCCCEEEECCCCCCCCCHHHCCCCCCCCCCEEEEEECCCEEEEEECCCCCCCCEE
HCGRKGLENKIIKNIIDKFYNNGCSNEDLIVAIGPSISKKYYLVDNKTLENFYRYVPHNE
CCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCEEEEECCCHHHHHHHHCCCCC
SISLIDNLPTLFKLKKLVNNKNKVLNALDLKKYAHLQLINEKIPKKNIDISDLCTYESNY
CCHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCC
DFHSWRRSKTYSRQWSFISP
CHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MDDNQQKFQEKDLKIKDKSFKYFLSPIFVENNFKHGFFTKTSSETNLSVLSKQLNENNKD
CCCCHHHHHHHCCEEECCCHHEECCEEEEECCCCCCEEECCCCCCHHHHHHHHHCCCCCC
CILNQIHSNQIVFGSETQGSEIEEADGIFSDKHNQTLWIYTADCMPILFADKSKRQVGAI
HHHEECCCCEEEECCCCCCCCCHHHCCCCCCCCCCEEEEEECCCEEEEEECCCCCCCCEE
HCGRKGLENKIIKNIIDKFYNNGCSNEDLIVAIGPSISKKYYLVDNKTLENFYRYVPHNE
CCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCEEEEECCCHHHHHHHHCCCCC
SISLIDNLPTLFKLKKLVNNKNKVLNALDLKKYAHLQLINEKIPKKNIDISDLCTYESNY
CCHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCC
DFHSWRRSKTYSRQWSFISP
CHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]