Definition Prochlorococcus marinus str. MIT 9515, complete genome.
Accession NC_008817
Length 1,704,176

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The map label for this gene is 123965785

Identifier: 123965785

GI number: 123965785

Start: 489838

End: 490437

Strand: Direct

Name: 123965785

Synonym: P9515_05501

Alternate gene names: NA

Gene position: 489838-490437 (Clockwise)

Preceding gene: 123965784

Following gene: 123965786

Centisome position: 28.74

GC content: 27.33

Gene sequence:

>600_bases
ATGATCAAAAATCCTATTCAAGAAGTTACAAATAAATTACAGTACAGAGCAATAGGTATTGTTAAAGGTGTTTACAAGCC
AAATGATGCAGAAAAATTAAATCGAGGAACATTAACCGATAAAGAAGGAAAAATAATCGACACAGTTGTTCTTGGTAAAG
CTTTATCTCTATTAAAAAAATATATCAACTTAGAGAGGAATTATTTTTGGATAGTTTATCCAAGAAACAAAAGTACTAAT
AACCTACATTTACAGGTAGCAGGTATATGGGATCCATATCAATTAAATCAAGTTGATATTAGTGATTCTGAAAAGGATCC
CAACGACTTATTAGATGAATTAAATTTAAACAATAATTATTTTTCTATTAGAGGTGAATTAGTTTATGTAAATACACAAA
AGAAAGAGATTGTTATCAAAATCTGTTCTTCTCCCCGTTCAAAGAGGTCAAAAAATACAACTTTTAAAATAATTATTGAG
GGTGAAATTCCTCTTCAATTTTTGAATAATTTTATAAGCCTTGATGTAACTAGAGATGGAAATACATTACGTATGGTTAA
GTACGAAGTTATTGAAAAAATAAAATCTAAAAAAGTATAG

Upstream 100 bases:

>100_bases
TGATGATGCTTTAGAATTATTTAATAAAATCGAAGAAAAAGAAAATCTTTAATTCGATTAAAATAACGTTCAAAACAAAA
AAATTCAAATACAAACAAAT

Downstream 100 bases:

>100_bases
TATTCCATATGATTAGAAATTTTTTATCTGTGAATTTTTATTATTAAAAATCTATAAAGGGCTATGGAAGAAATATTTAT
TGAATGTTCCCCTGGGGTCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 199; Mature: 199

Protein sequence:

>199_residues
MIKNPIQEVTNKLQYRAIGIVKGVYKPNDAEKLNRGTLTDKEGKIIDTVVLGKALSLLKKYINLERNYFWIVYPRNKSTN
NLHLQVAGIWDPYQLNQVDISDSEKDPNDLLDELNLNNNYFSIRGELVYVNTQKKEIVIKICSSPRSKRSKNTTFKIIIE
GEIPLQFLNNFISLDVTRDGNTLRMVKYEVIEKIKSKKV

Sequences:

>Translated_199_residues
MIKNPIQEVTNKLQYRAIGIVKGVYKPNDAEKLNRGTLTDKEGKIIDTVVLGKALSLLKKYINLERNYFWIVYPRNKSTN
NLHLQVAGIWDPYQLNQVDISDSEKDPNDLLDELNLNNNYFSIRGELVYVNTQKKEIVIKICSSPRSKRSKNTTFKIIIE
GEIPLQFLNNFISLDVTRDGNTLRMVKYEVIEKIKSKKV
>Mature_199_residues
MIKNPIQEVTNKLQYRAIGIVKGVYKPNDAEKLNRGTLTDKEGKIIDTVVLGKALSLLKKYINLERNYFWIVYPRNKSTN
NLHLQVAGIWDPYQLNQVDISDSEKDPNDLLDELNLNNNYFSIRGELVYVNTQKKEIVIKICSSPRSKRSKNTTFKIIIE
GEIPLQFLNNFISLDVTRDGNTLRMVKYEVIEKIKSKKV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23019; Mature: 23019

Theoretical pI: Translated: 9.99; Mature: 9.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKNPIQEVTNKLQYRAIGIVKGVYKPNDAEKLNRGTLTDKEGKIIDTVVLGKALSLLKK
CCCCHHHHHHHHHHHEEEEEEECCCCCCCHHHCCCCCCCCCCCCEEHHHHHHHHHHHHHH
YINLERNYFWIVYPRNKSTNNLHLQVAGIWDPYQLNQVDISDSEKDPNDLLDELNLNNNY
HHCCCCCEEEEEEECCCCCCEEEEEEEECCCCEECCEEECCCCCCCHHHHHHHCCCCCCE
FSIRGELVYVNTQKKEIVIKICSSPRSKRSKNTTFKIIIEGEIPLQFLNNFISLDVTRDG
EEEEEEEEEEECCCCEEEEEEECCCCCCCCCCCEEEEEEECCCCHHHHCCCEEEEEECCC
NTLRMVKYEVIEKIKSKKV
CEEEEHHHHHHHHHHHCCC
>Mature Secondary Structure
MIKNPIQEVTNKLQYRAIGIVKGVYKPNDAEKLNRGTLTDKEGKIIDTVVLGKALSLLKK
CCCCHHHHHHHHHHHEEEEEEECCCCCCCHHHCCCCCCCCCCCCEEHHHHHHHHHHHHHH
YINLERNYFWIVYPRNKSTNNLHLQVAGIWDPYQLNQVDISDSEKDPNDLLDELNLNNNY
HHCCCCCEEEEEEECCCCCCEEEEEEEECCCCEECCEEECCCCCCCHHHHHHHCCCCCCE
FSIRGELVYVNTQKKEIVIKICSSPRSKRSKNTTFKIIIEGEIPLQFLNNFISLDVTRDG
EEEEEEEEEEECCCCEEEEEEECCCCCCCCCCCEEEEEEECCCCHHHHCCCEEEEEECCC
NTLRMVKYEVIEKIKSKKV
CEEEEHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA