Definition Prochlorococcus marinus str. MIT 9515, complete genome.
Accession NC_008817
Length 1,704,176

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The map label for this gene is yloA [H]

Identifier: 123965765

GI number: 123965765

Start: 473274

End: 474974

Strand: Reverse

Name: yloA [H]

Synonym: P9515_05301

Alternate gene names: 123965765

Gene position: 474974-473274 (Counterclockwise)

Preceding gene: 123965767

Following gene: 123965764

Centisome position: 27.87

GC content: 28.57

Gene sequence:

>1701_bases
ATGGATATTACATCTATAAAATCTGTGTTGCATGAATTATCAGAAGAAATTCTACCCTCAAGGTTTGAAACCGCTCAACA
ACCCGAACCTAATATAATTCAATTCTGTTTAAGAGGAATAAATAGCCAAACTTGGATAGAAGTATCTTGGAGCAGTGATT
CTGCACGAATACTTAAAATAAATAGGCCTGAAAAATTAGGAGCAGAAAGTACACTCTCAAAACAATTGAGATTTGGCTTG
AAATATATGGCTTTAGTAACGATAAAGCAAGATAAATTTGAGAGGGTTATTAAATTTGGATTTGCGAAAAAGCCTGGAGA
TGAGATAAACAAGTACTTAATTTTTGAACTAATGGGTAAACATAGTAATATTTTTTACTTAGATAATAATCAAAAAATAA
TTGCAGTTGGCAAACAAATAAACTCTAATCAATCTAGCTTTCGTACCGTTTCTACAGGCTCTATCTATTCAGAGCCTCCC
AAAAACATGAAAAAGGAGCCCAGTCCAGACGAATCTTATGAAAATTGGAAAGAGTCTATATCTTCAGTTCCAGAAACTCT
TAAATACTGCTTAATAAATACATATCAAGGTGTAAGTCCAATATTAACGAAGCAACTTGAGGCTTTTAGTAATCTAGGTA
GTTCAGAAATAATGAATAAAAATATTGATTTCATAAGTGAAGTCAACTTAAAAAAGATATACCAAAGTTGGAAAATATGG
ATTGATAGGTTTAATAATAACAATTTTAATTTTTCAATTTTTGACAGTTTTTTTTATTCAGTTTGGTTTTTAAAGAGTGA
AATAAATAACATCAATAATATTGATGAAATTAATGGATTAGAAAACTATTATGATTTTTATCTAAAACAAAGAAAAATTG
ACGCCTTAATAAAAAAAATTGACGGAATAATTTTTAAACAAACAAATCTTGAGAAAAAGAATTTTAATTTGCAATCTGAT
CTTTTGATTAACTCCGAAAATTATCAAATATATAAAGAAAAAGCTGACAAAATATTTATGACTCATGAGATACAAAAAAA
AGATATTATCAAAGGCCAAAAGCTTTATAAAAAGTCAAAAAAGCTAAAAAGAGCACAAAATTTAATCAAAGAGAGGATTG
ATATTTATAAAAACAAGCTTGATAGATTAGAGGAATTTAGTGCTCTAGTGGATAACTTAAATTCTTTAAAAAATGAAAAT
CTGACAATTAGAATCAATTTACTGGAAGAAATTAAAGATGAAATTTGTAGAGAGTTTAATGTGAGAACCAGAAATACAAG
ATCGCAAAAAAAAGACTTGTCTAGATTAGAGTCAGCCCCAATAGAAATAAATACTCCTAAAGGCTTAAAAATACAAATAG
GAAGAAATATGAGGCAAAATGATCTAATAAGTTTTAAGTTTTCAAAAAAAGGGGATCTTTGGTTCCATGCACAAGAATCA
CCTGGAAGTCATGTTGTTTTAAAGTCCTCATCTCAAAAACCTTCAGATGAAGATATTCAAATATCCGCAGATTTAGCAGC
TTTATTTAGTAAAGCAAAAATGAATATTAAAGTCCCTATAAGTCTTGTAAATATAAAAGACCTCCAAAAAATAACTAAAG
GCGGTCCTGGCTGTGTTTCGTTCCACAATGTAGAAATTATTTGGGGTAATCCTACAAGAGGAAAAGATTACATTAAAAAA
AATCTTAAAAGACTAATTTAG

Upstream 100 bases:

>100_bases
ATAATGAGTTTTTTTAAATTTTTCATATTAAAATTTTTACAGTAAAGTGGGTTTTGGTGATTAACTACAAGAAATAATGC
AAAAAGGTGTACCTCAGATT

Downstream 100 bases:

>100_bases
CCTATAATTAAAAAAAATTATTTTTTAAATGTTAGATTTTTTACTAGGAACTCACGAATTTTTAGGTAATCATAGCTTTC
CAGAGTTTATTGTAGGGTAT

Product: secreted protein MPB70 precursor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 566; Mature: 566

Protein sequence:

>566_residues
MDITSIKSVLHELSEEILPSRFETAQQPEPNIIQFCLRGINSQTWIEVSWSSDSARILKINRPEKLGAESTLSKQLRFGL
KYMALVTIKQDKFERVIKFGFAKKPGDEINKYLIFELMGKHSNIFYLDNNQKIIAVGKQINSNQSSFRTVSTGSIYSEPP
KNMKKEPSPDESYENWKESISSVPETLKYCLINTYQGVSPILTKQLEAFSNLGSSEIMNKNIDFISEVNLKKIYQSWKIW
IDRFNNNNFNFSIFDSFFYSVWFLKSEINNINNIDEINGLENYYDFYLKQRKIDALIKKIDGIIFKQTNLEKKNFNLQSD
LLINSENYQIYKEKADKIFMTHEIQKKDIIKGQKLYKKSKKLKRAQNLIKERIDIYKNKLDRLEEFSALVDNLNSLKNEN
LTIRINLLEEIKDEICREFNVRTRNTRSQKKDLSRLESAPIEINTPKGLKIQIGRNMRQNDLISFKFSKKGDLWFHAQES
PGSHVVLKSSSQKPSDEDIQISADLAALFSKAKMNIKVPISLVNIKDLQKITKGGPGCVSFHNVEIIWGNPTRGKDYIKK
NLKRLI

Sequences:

>Translated_566_residues
MDITSIKSVLHELSEEILPSRFETAQQPEPNIIQFCLRGINSQTWIEVSWSSDSARILKINRPEKLGAESTLSKQLRFGL
KYMALVTIKQDKFERVIKFGFAKKPGDEINKYLIFELMGKHSNIFYLDNNQKIIAVGKQINSNQSSFRTVSTGSIYSEPP
KNMKKEPSPDESYENWKESISSVPETLKYCLINTYQGVSPILTKQLEAFSNLGSSEIMNKNIDFISEVNLKKIYQSWKIW
IDRFNNNNFNFSIFDSFFYSVWFLKSEINNINNIDEINGLENYYDFYLKQRKIDALIKKIDGIIFKQTNLEKKNFNLQSD
LLINSENYQIYKEKADKIFMTHEIQKKDIIKGQKLYKKSKKLKRAQNLIKERIDIYKNKLDRLEEFSALVDNLNSLKNEN
LTIRINLLEEIKDEICREFNVRTRNTRSQKKDLSRLESAPIEINTPKGLKIQIGRNMRQNDLISFKFSKKGDLWFHAQES
PGSHVVLKSSSQKPSDEDIQISADLAALFSKAKMNIKVPISLVNIKDLQKITKGGPGCVSFHNVEIIWGNPTRGKDYIKK
NLKRLI
>Mature_566_residues
MDITSIKSVLHELSEEILPSRFETAQQPEPNIIQFCLRGINSQTWIEVSWSSDSARILKINRPEKLGAESTLSKQLRFGL
KYMALVTIKQDKFERVIKFGFAKKPGDEINKYLIFELMGKHSNIFYLDNNQKIIAVGKQINSNQSSFRTVSTGSIYSEPP
KNMKKEPSPDESYENWKESISSVPETLKYCLINTYQGVSPILTKQLEAFSNLGSSEIMNKNIDFISEVNLKKIYQSWKIW
IDRFNNNNFNFSIFDSFFYSVWFLKSEINNINNIDEINGLENYYDFYLKQRKIDALIKKIDGIIFKQTNLEKKNFNLQSD
LLINSENYQIYKEKADKIFMTHEIQKKDIIKGQKLYKKSKKLKRAQNLIKERIDIYKNKLDRLEEFSALVDNLNSLKNEN
LTIRINLLEEIKDEICREFNVRTRNTRSQKKDLSRLESAPIEINTPKGLKIQIGRNMRQNDLISFKFSKKGDLWFHAQES
PGSHVVLKSSSQKPSDEDIQISADLAALFSKAKMNIKVPISLVNIKDLQKITKGGPGCVSFHNVEIIWGNPTRGKDYIKK
NLKRLI

Specific function: Unknown

COG id: COG1293

COG function: function code K; Predicted RNA-binding protein homologous to eukaryotic snRNP

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the SDCCAG1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008532
- InterPro:   IPR008616 [H]

Pfam domain/function: PF05670 DUF814; PF05833 FbpA [H]

EC number: NA

Molecular weight: Translated: 65741; Mature: 65741

Theoretical pI: Translated: 10.01; Mature: 10.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDITSIKSVLHELSEEILPSRFETAQQPEPNIIQFCLRGINSQTWIEVSWSSDSARILKI
CCHHHHHHHHHHHHHHHCCHHHHHCCCCCCHHHHHHHHCCCCCEEEEEEECCCCEEEEEE
NRPEKLGAESTLSKQLRFGLKYMALVTIKQDKFERVIKFGFAKKPGDEINKYLIFELMGK
CCCHHCCCHHHHHHHHHHCCCEEEEEEECHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCC
HSNIFYLDNNQKIIAVGKQINSNQSSFRTVSTGSIYSEPPKNMKKEPSPDESYENWKESI
CCCEEEEECCCEEEEECCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHH
SSVPETLKYCLINTYQGVSPILTKQLEAFSNLGSSEIMNKNIDFISEVNLKKIYQSWKIW
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHCCCCCHHHHCCHHHHHHHHHHH
IDRFNNNNFNFSIFDSFFYSVWFLKSEINNINNIDEINGLENYYDFYLKQRKIDALIKKI
HHEECCCCCCEEHHHHHHHHHHHHHHHHCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHH
DGIIFKQTNLEKKNFNLQSDLLINSENYQIYKEKADKIFMTHEIQKKDIIKGQKLYKKSK
CCEEEEECCCCHHCCCCCCCEEECCCCCEEEECCCCEEEEEECCCHHHHHHHHHHHHHHH
KLKRAQNLIKERIDIYKNKLDRLEEFSALVDNLNSLKNENLTIRINLLEEIKDEICREFN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHCC
VRTRNTRSQKKDLSRLESAPIEINTPKGLKIQIGRNMRQNDLISFKFSKKGDLWFHAQES
CCCCCCHHHHHHHHHHHCCCEEEECCCCEEEEECCCCCCCCEEEEEECCCCCEEEEECCC
PGSHVVLKSSSQKPSDEDIQISADLAALFSKAKMNIKVPISLVNIKDLQKITKGGPGCVS
CCCEEEEECCCCCCCCCCEEEEHHHHHHHHHCCCEEEEEEEEECHHHHHHHHCCCCCEEE
FHNVEIIWGNPTRGKDYIKKNLKRLI
EEEEEEEECCCCCCHHHHHHHHHHCC
>Mature Secondary Structure
MDITSIKSVLHELSEEILPSRFETAQQPEPNIIQFCLRGINSQTWIEVSWSSDSARILKI
CCHHHHHHHHHHHHHHHCCHHHHHCCCCCCHHHHHHHHCCCCCEEEEEEECCCCEEEEEE
NRPEKLGAESTLSKQLRFGLKYMALVTIKQDKFERVIKFGFAKKPGDEINKYLIFELMGK
CCCHHCCCHHHHHHHHHHCCCEEEEEEECHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCC
HSNIFYLDNNQKIIAVGKQINSNQSSFRTVSTGSIYSEPPKNMKKEPSPDESYENWKESI
CCCEEEEECCCEEEEECCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHH
SSVPETLKYCLINTYQGVSPILTKQLEAFSNLGSSEIMNKNIDFISEVNLKKIYQSWKIW
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHCCCCCHHHHCCHHHHHHHHHHH
IDRFNNNNFNFSIFDSFFYSVWFLKSEINNINNIDEINGLENYYDFYLKQRKIDALIKKI
HHEECCCCCCEEHHHHHHHHHHHHHHHHCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHH
DGIIFKQTNLEKKNFNLQSDLLINSENYQIYKEKADKIFMTHEIQKKDIIKGQKLYKKSK
CCEEEEECCCCHHCCCCCCCEEECCCCCEEEECCCCEEEEEECCCHHHHHHHHHHHHHHH
KLKRAQNLIKERIDIYKNKLDRLEEFSALVDNLNSLKNENLTIRINLLEEIKDEICREFN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHCC
VRTRNTRSQKKDLSRLESAPIEINTPKGLKIQIGRNMRQNDLISFKFSKKGDLWFHAQES
CCCCCCHHHHHHHHHHHCCCEEEECCCCEEEEECCCCCCCCEEEEEECCCCCEEEEECCC
PGSHVVLKSSSQKPSDEDIQISADLAALFSKAKMNIKVPISLVNIKDLQKITKGGPGCVS
CCCEEEEECCCCCCCCCCEEEEHHHHHHHHHCCCEEEEEEEEECHHHHHHHHCCCCCEEE
FHNVEIIWGNPTRGKDYIKKNLKRLI
EEEEEEEECCCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377; 9534248 [H]