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The map label for this gene is ldcA [C]

Identifier: 123965753

GI number: 123965753

Start: 464561

End: 465433

Strand: Reverse

Name: ldcA [C]

Synonym: P9515_05181

Alternate gene names: 123965753

Gene position: 465433-464561 (Counterclockwise)

Preceding gene: 123965754

Following gene: 123965751

Centisome position: 27.31

GC content: 31.04

Gene sequence:

>873_bases
ATGTTAACTAAATTAAAAAAAGGCGATGAAATCAACATTTTAGCGCCTGCTTCTTTTATCGATAAAGAAGAAAATTTTAC
AAAAGGCATAAATATTTTAAAAACATGGGATTTAAAAATTGCTATCAACGGTAACCTCTCAAAAAAATTTGGTTATTTTG
CTGGAGATGATCAAACTAGATTTGAAGAACTCAAAAAAGCACAAAATAGTAAGCTTATCATTTTCGCTAAAGGAGGCTGG
GGATCCGCAAGACTTTTAGAAAAAAATCCAAACTGGGGTGATGGCTTGATGATGGGATTCTCTGATACATGTTCATTATT
GTTATCAAAATATAAACAAGGATCCTTTGGCTCGATTCATGGCCCTATGATCACTACTCTTTTTAAAGAACCTGAATGGA
GTTTAAGGAGACTAAGAAATTTACTTTTTGAGGGGTATGTTGAGGATATTAAGGGGATCCCTTTACAGAAAGGAAAAGCA
ACTGGAGAAATTATTGTATCTAACCTAACTATTGTTTCTTTTTTAATTGGTACTAATCACTTTCCGGAATTAAAAGGAAA
AATAATAATTTTTGAGGATATTAATGAAGATATTTATAAAATTGATCGAATGTTAACTTATTTGAGAATGACAAAAAAAT
TAAACGAAATTGCAGGAATTGGATTCGGAAGTTTTTCAGATGATCTATATACCCCTGAGTGGAAAGAATTACTCAAAAGC
TTAATTTTTGAGAGATTTCAAGAATTTGATATTCCCATTCTTTTTGATCTCCCAATTGGACATATATCTGGGAATGCATG
CATTCCTCTTGGTTGTAAAGCTACATTAAATGGAAATAATGGAATACTTAGTATTTCTATTCCTTGTTACTAA

Upstream 100 bases:

>100_bases
TCATTCCATTAAAAAAATTGGTAATCATTTCAAAAACCAAACAATATATGGTGGATTAATTTTGTTGGGAATCATAATCT
CCTCATAAATTATTAAACTA

Downstream 100 bases:

>100_bases
TAATCTTTTAAAAATAGTTTCGCTATTTGCAAATCTAATGGAGATGTGATTTTTATGTTCGAAGAATTCCCTTCAATAAT
TCTCACTTGCCAATTCAACA

Product: putative carboxypeptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 290; Mature: 290

Protein sequence:

>290_residues
MLTKLKKGDEINILAPASFIDKEENFTKGINILKTWDLKIAINGNLSKKFGYFAGDDQTRFEELKKAQNSKLIIFAKGGW
GSARLLEKNPNWGDGLMMGFSDTCSLLLSKYKQGSFGSIHGPMITTLFKEPEWSLRRLRNLLFEGYVEDIKGIPLQKGKA
TGEIIVSNLTIVSFLIGTNHFPELKGKIIIFEDINEDIYKIDRMLTYLRMTKKLNEIAGIGFGSFSDDLYTPEWKELLKS
LIFERFQEFDIPILFDLPIGHISGNACIPLGCKATLNGNNGILSISIPCY

Sequences:

>Translated_290_residues
MLTKLKKGDEINILAPASFIDKEENFTKGINILKTWDLKIAINGNLSKKFGYFAGDDQTRFEELKKAQNSKLIIFAKGGW
GSARLLEKNPNWGDGLMMGFSDTCSLLLSKYKQGSFGSIHGPMITTLFKEPEWSLRRLRNLLFEGYVEDIKGIPLQKGKA
TGEIIVSNLTIVSFLIGTNHFPELKGKIIIFEDINEDIYKIDRMLTYLRMTKKLNEIAGIGFGSFSDDLYTPEWKELLKS
LIFERFQEFDIPILFDLPIGHISGNACIPLGCKATLNGNNGILSISIPCY
>Mature_290_residues
MLTKLKKGDEINILAPASFIDKEENFTKGINILKTWDLKIAINGNLSKKFGYFAGDDQTRFEELKKAQNSKLIIFAKGGW
GSARLLEKNPNWGDGLMMGFSDTCSLLLSKYKQGSFGSIHGPMITTLFKEPEWSLRRLRNLLFEGYVEDIKGIPLQKGKA
TGEIIVSNLTIVSFLIGTNHFPELKGKIIIFEDINEDIYKIDRMLTYLRMTKKLNEIAGIGFGSFSDDLYTPEWKELLKS
LIFERFQEFDIPILFDLPIGHISGNACIPLGCKATLNGNNGILSISIPCY

Specific function: L,D-carboxypeptidase [C]

COG id: COG1619

COG function: function code V; Uncharacterized proteins, homologs of microcin C7 resistance protein MccF

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase S66 family [H]

Homologues:

Organism=Escherichia coli, GI1787441, Length=291, Percent_Identity=25.4295532646048, Blast_Score=79, Evalue=3e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003507 [H]

Pfam domain/function: PF02016 Peptidase_S66 [H]

EC number: NA

Molecular weight: Translated: 32633; Mature: 32633

Theoretical pI: Translated: 8.29; Mature: 8.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTKLKKGDEINILAPASFIDKEENFTKGINILKTWDLKIAINGNLSKKFGYFAGDDQTR
CCCCCCCCCEEEEEECHHHHCCCCCHHHCCCEEEEEEEEEEECCCCCHHCCCCCCCCHHH
FEELKKAQNSKLIIFAKGGWGSARLLEKNPNWGDGLMMGFSDTCSLLLSKYKQGSFGSIH
HHHHHHHCCCEEEEEEECCCCCCEEEECCCCCCCCEEECHHHHHHHHHHHHCCCCCCCCC
GPMITTLFKEPEWSLRRLRNLLFEGYVEDIKGIPLQKGKATGEIIVSNLTIVSFLIGTNH
CHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEHHHHHHHHHHCCCC
FPELKGKIIIFEDINEDIYKIDRMLTYLRMTKKLNEIAGIGFGSFSDDLYTPEWKELLKS
CCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHH
LIFERFQEFDIPILFDLPIGHISGNACIPLGCKATLNGNNGILSISIPCY
HHHHHHHHCCCCEEEECCCCEECCCEEEEECCEEEECCCCCEEEEECCCC
>Mature Secondary Structure
MLTKLKKGDEINILAPASFIDKEENFTKGINILKTWDLKIAINGNLSKKFGYFAGDDQTR
CCCCCCCCCEEEEEECHHHHCCCCCHHHCCCEEEEEEEEEEECCCCCHHCCCCCCCCHHH
FEELKKAQNSKLIIFAKGGWGSARLLEKNPNWGDGLMMGFSDTCSLLLSKYKQGSFGSIH
HHHHHHHCCCEEEEEEECCCCCCEEEECCCCCCCCEEECHHHHHHHHHHHHCCCCCCCCC
GPMITTLFKEPEWSLRRLRNLLFEGYVEDIKGIPLQKGKATGEIIVSNLTIVSFLIGTNH
CHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEHHHHHHHHHHCCCC
FPELKGKIIIFEDINEDIYKIDRMLTYLRMTKKLNEIAGIGFGSFSDDLYTPEWKELLKS
CCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHH
LIFERFQEFDIPILFDLPIGHISGNACIPLGCKATLNGNNGILSISIPCY
HHHHHHHHCCCCEEEECCCCEECCCEEEEECCEEEECCCCCEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]