Definition Prochlorococcus marinus str. MIT 9515, complete genome.
Accession NC_008817
Length 1,704,176

Click here to switch to the map view.

The map label for this gene is 123965748

Identifier: 123965748

GI number: 123965748

Start: 460567

End: 460971

Strand: Direct

Name: 123965748

Synonym: P9515_05131

Alternate gene names: NA

Gene position: 460567-460971 (Clockwise)

Preceding gene: 123965747

Following gene: 123965750

Centisome position: 27.03

GC content: 23.46

Gene sequence:

>405_bases
ATGTTCTTAAAAGATCATTTAAAAGATTCTTATCAAAAAGCATCTTTTGATAAAAATAATTTAAAGATAGAAAATATAAT
TAATAGATGGGTACATAGGTTTGATATTGAATCTTTGAATGAGCTAATAGCTTCAAATCAAGATCAAATTAAATTATTAG
AGGAAGATAAGCTAGTTTCAAATCAAGATCAAACAAGATCGGAATTATTAGAAATTGTTCAAAACGAAATAGAGGTAAAA
TTTAAATCTAATAAAGAAAACAAATATAAAGAAAATAAAATTAATAATAAAGATATTTATGGTTGTTATAAAAACAAGAG
TGAAGATAACAAATTAAAGGAATTACCGCTGCCTAAAATAAATAATCTCAGAAAATGGATTAACAACGGTAAAAAAGCCA
GCTAG

Upstream 100 bases:

>100_bases
TTAACTTGTAAGAGTTGTATCTCAATTTTATTTTCCCTAACAATTTTTTCCTTAATCATTATCAGACCACTTTTAAATAG
AAAATTAAATTAGTAAATTT

Downstream 100 bases:

>100_bases
CCTACATCATACCAGGCATACCCATGCCTCCCATGCCAGGCATACCCATGCCGCCCATGCCAGGCATACCCATGCCGCCC
ATACCAGGCATACCCATGCC

Product: glycoprotein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 134; Mature: 134

Protein sequence:

>134_residues
MFLKDHLKDSYQKASFDKNNLKIENIINRWVHRFDIESLNELIASNQDQIKLLEEDKLVSNQDQTRSELLEIVQNEIEVK
FKSNKENKYKENKINNKDIYGCYKNKSEDNKLKELPLPKINNLRKWINNGKKAS

Sequences:

>Translated_134_residues
MFLKDHLKDSYQKASFDKNNLKIENIINRWVHRFDIESLNELIASNQDQIKLLEEDKLVSNQDQTRSELLEIVQNEIEVK
FKSNKENKYKENKINNKDIYGCYKNKSEDNKLKELPLPKINNLRKWINNGKKAS
>Mature_134_residues
MFLKDHLKDSYQKASFDKNNLKIENIINRWVHRFDIESLNELIASNQDQIKLLEEDKLVSNQDQTRSELLEIVQNEIEVK
FKSNKENKYKENKINNKDIYGCYKNKSEDNKLKELPLPKINNLRKWINNGKKAS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15981; Mature: 15981

Theoretical pI: Translated: 9.58; Mature: 9.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFLKDHLKDSYQKASFDKNNLKIENIINRWVHRFDIESLNELIASNQDQIKLLEEDKLVS
CCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHCCCHHHHHHHHHHHCC
NQDQTRSELLEIVQNEIEVKFKSNKENKYKENKINNKDIYGCYKNKSEDNKLKELPLPKI
CCCHHHHHHHHHHHHHHHEEECCCCCCHHHHHCCCCCCEEECCCCCCCCCHHHHCCCCCH
NNLRKWINNGKKAS
HHHHHHHCCCCCCC
>Mature Secondary Structure
MFLKDHLKDSYQKASFDKNNLKIENIINRWVHRFDIESLNELIASNQDQIKLLEEDKLVS
CCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHCCCHHHHHHHHHHHCC
NQDQTRSELLEIVQNEIEVKFKSNKENKYKENKINNKDIYGCYKNKSEDNKLKELPLPKI
CCCHHHHHHHHHHHHHHHEEECCCCCCHHHHHCCCCCCEEECCCCCCCCCHHHHCCCCCH
NNLRKWINNGKKAS
HHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA