| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
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The map label for this gene is 123965735
Identifier: 123965735
GI number: 123965735
Start: 448230
End: 448880
Strand: Direct
Name: 123965735
Synonym: P9515_05001
Alternate gene names: NA
Gene position: 448230-448880 (Clockwise)
Preceding gene: 123965734
Following gene: 123965736
Centisome position: 26.3
GC content: 31.03
Gene sequence:
>651_bases GTGAAAAATCATATGAAATTTTTAAGAAAAAATGACGCACTTAATATTGTTGAACCTTCCTATTTAGCTTCTCTTTCTTC TTTACTTTGGGTCGCTTTATATTATTTACCTATAGGTGGAGCATTGTTGAGATTAGTATTACCACTCCCTATGATCTTGT TGCACTTGAGAAGAGGAACTAGTACTGCCTTGGAAGGCCTCATAATACAATTTCTTTTGTTATTAATACTTATGGGTCCA ATTAGAGGGACTTTATTTTTATTCCCATATGGAATATTAGCCTTTTGGCTCGGATGGTCTTGGTTCAAGCAAAAAAACTG GTGGCTTAGTTGGAGTGTAGGTTTTATTCTAGGGACATTAGGTTTTTTTATAAGAGTATTTGCATTATCAACGTTAGTTG GTGATAATCTTTGGATAATAATAACAAGAGCAAGTTATGGACTTTTAGACAAATTTATAGAATTATTTAATTTACCCTTT TCACCTTCGATCAGAATTATACAATTAGTCGCACTACTATTAATAATTTTTCAAGAAATGGTTTATGTCTTAACTATACA TATTCTTTCATATTCTCTTTTCCCTAGATTAAATTCAAATATTCCTGATCCTCCAAAAATAATGAATGGATTTGTTGATT TAGGTCTTTGA
Upstream 100 bases:
>100_bases TAAGTAACATTTTAAGAAATTCTGATGTAAATTTCGAAATAGAAAAGATAGAACGTTTTCTTGACTCAAAAAACGAAAGT ATAAAAAGGGATTAAATAGC
Downstream 100 bases:
>100_bases TATAAGATTAAATAATGCAGAAAACGTATTTAGGAATAAAGTTATTTGGTAGTAAAATTAATCAAAAATTATGTTCTGAA AGAGTAGAAACTCTTAAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 216; Mature: 216
Protein sequence:
>216_residues MKNHMKFLRKNDALNIVEPSYLASLSSLLWVALYYLPIGGALLRLVLPLPMILLHLRRGTSTALEGLIIQFLLLLILMGP IRGTLFLFPYGILAFWLGWSWFKQKNWWLSWSVGFILGTLGFFIRVFALSTLVGDNLWIIITRASYGLLDKFIELFNLPF SPSIRIIQLVALLLIIFQEMVYVLTIHILSYSLFPRLNSNIPDPPKIMNGFVDLGL
Sequences:
>Translated_216_residues MKNHMKFLRKNDALNIVEPSYLASLSSLLWVALYYLPIGGALLRLVLPLPMILLHLRRGTSTALEGLIIQFLLLLILMGP IRGTLFLFPYGILAFWLGWSWFKQKNWWLSWSVGFILGTLGFFIRVFALSTLVGDNLWIIITRASYGLLDKFIELFNLPF SPSIRIIQLVALLLIIFQEMVYVLTIHILSYSLFPRLNSNIPDPPKIMNGFVDLGL >Mature_216_residues MKNHMKFLRKNDALNIVEPSYLASLSSLLWVALYYLPIGGALLRLVLPLPMILLHLRRGTSTALEGLIIQFLLLLILMGP IRGTLFLFPYGILAFWLGWSWFKQKNWWLSWSVGFILGTLGFFIRVFALSTLVGDNLWIIITRASYGLLDKFIELFNLPF SPSIRIIQLVALLLIIFQEMVYVLTIHILSYSLFPRLNSNIPDPPKIMNGFVDLGL
Specific function: Unknown
COG id: COG4241
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24725; Mature: 24725
Theoretical pI: Translated: 10.30; Mature: 10.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNHMKFLRKNDALNIVEPSYLASLSSLLWVALYYLPIGGALLRLVLPLPMILLHLRRGT CCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC STALEGLIIQFLLLLILMGPIRGTLFLFPYGILAFWLGWSWFKQKNWWLSWSVGFILGTL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHH GFFIRVFALSTLVGDNLWIIITRASYGLLDKFIELFNLPFSPSIRIIQLVALLLIIFQEM HHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH VYVLTIHILSYSLFPRLNSNIPDPPKIMNGFVDLGL HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCC >Mature Secondary Structure MKNHMKFLRKNDALNIVEPSYLASLSSLLWVALYYLPIGGALLRLVLPLPMILLHLRRGT CCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC STALEGLIIQFLLLLILMGPIRGTLFLFPYGILAFWLGWSWFKQKNWWLSWSVGFILGTL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHH GFFIRVFALSTLVGDNLWIIITRASYGLLDKFIELFNLPFSPSIRIIQLVALLLIIFQEM HHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH VYVLTIHILSYSLFPRLNSNIPDPPKIMNGFVDLGL HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA