| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
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The map label for this gene is yidD [C]
Identifier: 123965707
GI number: 123965707
Start: 421322
End: 421513
Strand: Direct
Name: yidD [C]
Synonym: P9515_04721
Alternate gene names: 123965707
Gene position: 421322-421513 (Clockwise)
Preceding gene: 123965702
Following gene: 123965708
Centisome position: 24.72
GC content: 40.62
Gene sequence:
>192_bases ATGATTTCCTTCTATCAAAAATGGTTTTCGCCTTTTTTTGGACCAAGATGCAGATTTATACCAAGTTGTAGTTCTTATGG ATACGAGGCTATTACAAGGCACGGCCCTTGGAGAGGTGGATGGTTGACCCTAAGAAGATTAAGTAAATGTCATCCGTTAA CTCCATGCGGTTGTGATCCTGTTCCTGATTAA
Upstream 100 bases:
>100_bases TTGATTAAATTCAACTAAACTAATTACTACTGAACTGTTATTTTACATCATTAAAGTGATTAAAAGCGTCAACAAACTAA TTACATCTATACTTCTTTTA
Downstream 100 bases:
>100_bases ATGAATGAAAATATTTATTTTTGTTAGGCAGGGATGCTGCCTTTGTGATTCATTAAAAAACAAACTGGCAAAAATAAATC TTGATGAGTTATTCCCTAAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 63; Mature: 63
Protein sequence:
>63_residues MISFYQKWFSPFFGPRCRFIPSCSSYGYEAITRHGPWRGGWLTLRRLSKCHPLTPCGCDPVPD
Sequences:
>Translated_63_residues MISFYQKWFSPFFGPRCRFIPSCSSYGYEAITRHGPWRGGWLTLRRLSKCHPLTPCGCDPVPD >Mature_63_residues MISFYQKWFSPFFGPRCRFIPSCSSYGYEAITRHGPWRGGWLTLRRLSKCHPLTPCGCDPVPD
Specific function: Unknown
COG id: COG0759
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0161 family [H]
Homologues:
Organism=Escherichia coli, GI87082322, Length=62, Percent_Identity=58.0645161290323, Blast_Score=81, Evalue=2e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002696 - ProDom: PD004225 [H]
Pfam domain/function: PF01809 DUF37 [H]
EC number: NA
Molecular weight: Translated: 7312; Mature: 7312
Theoretical pI: Translated: 9.08; Mature: 9.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
7.9 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 9.5 %Cys+Met (Translated Protein) 7.9 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 9.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MISFYQKWFSPFFGPRCRFIPSCSSYGYEAITRHGPWRGGWLTLRRLSKCHPLTPCGCDP CCCHHHHHCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCC VPD CCC >Mature Secondary Structure MISFYQKWFSPFFGPRCRFIPSCSSYGYEAITRHGPWRGGWLTLRRLSKCHPLTPCGCDP CCCHHHHHCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCC VPD CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA