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The map label for this gene is crtI [H]

Identifier: 123965609

GI number: 123965609

Start: 346927

End: 348456

Strand: Reverse

Name: crtI [H]

Synonym: P9515_03741

Alternate gene names: 123965609

Gene position: 348456-346927 (Counterclockwise)

Preceding gene: 123965611

Following gene: 123965608

Centisome position: 20.45

GC content: 35.23

Gene sequence:

>1530_bases
ATGAATAAATATGACGTAGTTATTGTAGGTAGTGGTATAGGGGGTTTATGTTGTGGATCTATATTAGCCTTAGCTGGGAA
GAGAGTTTTAATTTGTGAGGCACATTCACAACCCGGTGGCGTTGCTCATAGCTTCAATTTAAAAGGTTATAAATTTGAAT
CAGGCCCTTCATTATGGAGTGGTTTAGGTAGGTGGCCTACTACAAATCCTTTAGGACAAATACTTAGATTAATTGATGAA
AAAGTTGAACTTATTAAATATCAAGGATGGCTAGTAAACGTTCCTGAGGGCAACTTTAACCTAGAAGTAGGCGAAGAGCC
ATTTAAATCAAGAATAAAGCTATTGAGAGGTAATAGATCAGTTGAAGAGTGGGATTCATTGATGTCAGCAATAAAACCCC
TTAGTAAATTAGTTAGTGAGATTCCTCTCCTATCTAGTTCACCTGAAACAATTAATATTTTAGGATTCATAAAGTTAGCA
TCCAAATTCTTACCAAACCTAAATTTATTACCAAAACTTAATGGAGGCTTTGGGGATATTGTCGACAATCATCTTAAAGA
TCCTTTCCTTAGAAATTGGGTAGATCTGCTTAGTTTTTTAATAAGTGGGATGCCAATGCATGATACAAATTCTGCTGCAA
TGGCAACCCTATTTGATGAATGGTTTAAACCTACATCTTATTTAGAATATCCAAAGGGAGGAAGTGAAAGCATCGTAAAG
GCTCTGATTAATGCTTTCAAAAAAAATGGTGGTGAACTAATTGTTTCATCTAAAGTAGAAGCTATAAACTTTAGGAAAAA
TATTGCCTTAGGTGTAACGTTAGAAAATGGTTCCAAATTCACTTCAGACTTTGTCGTACTGAATACCGATATCTGGACTT
CTCGCAAATTAATTCCACAAGAACTCCAAAAAAAATGGAAGCCAAAGGCTAAAAATATAAATAAATGTGGTTCCTTTCTT
CACCTTCATCTAGGTTTTGATGCCTCAGGTTTACAAAATTTACCTATTCATTCAATACATGTTGATGATTGGGGGAGAGG
GATTACTGCAGAAAGAAATGTAGTAGTCTTTTCAATTCCTTCTGTACTAGATAAGAGTATGGCTCCAAAAGGGAAACATG
TTCTTCATGGATACACTCCAGCCAATGAACCATGGGAAATATGGGAGAATTTAAACTCAAATGATTTAACTTACAAAAAG
CTTAAAGAAGAAAGATGCTCAATATTCCTCAAATCTTTGAGAAAAATAATTCCTGATATAGATAACAGAATTGAGATCAA
GTTGCTTGGAACCCCTCTAACACATAAAAAATTTACAAATACTTACTGCGGTAGCTACGGTCCAGCCTTATCGGCAGCTC
AAGGGTTGTTTCCCGGATGTAAAACTCCTATTAAAAATTTGCTTACTTGTGGCGCCAGTACCTTTCCAGGAATAGGCATA
CCGGCAGTTTCAGCAAGTGGAGCATATGCTGCTGAAAAAATTATTGGAAAGAAAGAATATAAAAATCTTCTTAAAATGAT
AGATCTTTAA

Upstream 100 bases:

>100_bases
TACATCTTCTTTCTTGCAGTTGTTTTAAGCATCACTACCACAACAAATACTTTCGTTTAAGCCCTAATTCTTACAATTTC
TAGAGCTTAATTTGTTATCA

Downstream 100 bases:

>100_bases
AACATACGGCAATATTAATTAATTGATCTTTAGTTAAGAAATAAGAAGAAAAAAAGAAATTTTTTTTGAGGATGATATTC
TTTATTTGAATATAATTTTT

Product: phytoene dehydrogenase

Products: NA

Alternate protein names: Phytoene desaturase [H]

Number of amino acids: Translated: 509; Mature: 509

Protein sequence:

>509_residues
MNKYDVVIVGSGIGGLCCGSILALAGKRVLICEAHSQPGGVAHSFNLKGYKFESGPSLWSGLGRWPTTNPLGQILRLIDE
KVELIKYQGWLVNVPEGNFNLEVGEEPFKSRIKLLRGNRSVEEWDSLMSAIKPLSKLVSEIPLLSSSPETINILGFIKLA
SKFLPNLNLLPKLNGGFGDIVDNHLKDPFLRNWVDLLSFLISGMPMHDTNSAAMATLFDEWFKPTSYLEYPKGGSESIVK
ALINAFKKNGGELIVSSKVEAINFRKNIALGVTLENGSKFTSDFVVLNTDIWTSRKLIPQELQKKWKPKAKNINKCGSFL
HLHLGFDASGLQNLPIHSIHVDDWGRGITAERNVVVFSIPSVLDKSMAPKGKHVLHGYTPANEPWEIWENLNSNDLTYKK
LKEERCSIFLKSLRKIIPDIDNRIEIKLLGTPLTHKKFTNTYCGSYGPALSAAQGLFPGCKTPIKNLLTCGASTFPGIGI
PAVSASGAYAAEKIIGKKEYKNLLKMIDL

Sequences:

>Translated_509_residues
MNKYDVVIVGSGIGGLCCGSILALAGKRVLICEAHSQPGGVAHSFNLKGYKFESGPSLWSGLGRWPTTNPLGQILRLIDE
KVELIKYQGWLVNVPEGNFNLEVGEEPFKSRIKLLRGNRSVEEWDSLMSAIKPLSKLVSEIPLLSSSPETINILGFIKLA
SKFLPNLNLLPKLNGGFGDIVDNHLKDPFLRNWVDLLSFLISGMPMHDTNSAAMATLFDEWFKPTSYLEYPKGGSESIVK
ALINAFKKNGGELIVSSKVEAINFRKNIALGVTLENGSKFTSDFVVLNTDIWTSRKLIPQELQKKWKPKAKNINKCGSFL
HLHLGFDASGLQNLPIHSIHVDDWGRGITAERNVVVFSIPSVLDKSMAPKGKHVLHGYTPANEPWEIWENLNSNDLTYKK
LKEERCSIFLKSLRKIIPDIDNRIEIKLLGTPLTHKKFTNTYCGSYGPALSAAQGLFPGCKTPIKNLLTCGASTFPGIGI
PAVSASGAYAAEKIIGKKEYKNLLKMIDL
>Mature_509_residues
MNKYDVVIVGSGIGGLCCGSILALAGKRVLICEAHSQPGGVAHSFNLKGYKFESGPSLWSGLGRWPTTNPLGQILRLIDE
KVELIKYQGWLVNVPEGNFNLEVGEEPFKSRIKLLRGNRSVEEWDSLMSAIKPLSKLVSEIPLLSSSPETINILGFIKLA
SKFLPNLNLLPKLNGGFGDIVDNHLKDPFLRNWVDLLSFLISGMPMHDTNSAAMATLFDEWFKPTSYLEYPKGGSESIVK
ALINAFKKNGGELIVSSKVEAINFRKNIALGVTLENGSKFTSDFVVLNTDIWTSRKLIPQELQKKWKPKAKNINKCGSFL
HLHLGFDASGLQNLPIHSIHVDDWGRGITAERNVVVFSIPSVLDKSMAPKGKHVLHGYTPANEPWEIWENLNSNDLTYKK
LKEERCSIFLKSLRKIIPDIDNRIEIKLLGTPLTHKKFTNTYCGSYGPALSAAQGLFPGCKTPIKNLLTCGASTFPGIGI
PAVSASGAYAAEKIIGKKEYKNLLKMIDL

Specific function: This enzyme converts phytoene into lycopene via the intermediaries of phytofluene, zeta-carotene and neurosporene by the introduction of four double bonds [H]

COG id: COG1233

COG function: function code Q; Phytoene dehydrogenase and related proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the carotenoid/retinoid oxidoreductase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002937
- InterPro:   IPR008150
- InterPro:   IPR014105 [H]

Pfam domain/function: PF01593 Amino_oxidase [H]

EC number: NA

Molecular weight: Translated: 56128; Mature: 56128

Theoretical pI: Translated: 9.62; Mature: 9.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKYDVVIVGSGIGGLCCGSILALAGKRVLICEAHSQPGGVAHSFNLKGYKFESGPSLWS
CCCEEEEEEECCCCHHHHHHHHHHHCCEEEEEECCCCCCCCEEEECCCCEEECCCCHHHH
GLGRWPTTNPLGQILRLIDEKVELIKYQGWLVNVPEGNFNLEVGEEPFKSRIKLLRGNRS
CCCCCCCCCHHHHHHHHHHHHHHHHEECCEEEECCCCCEEEEECCHHHHHHHHHHHCCCC
VEEWDSLMSAIKPLSKLVSEIPLLSSSPETINILGFIKLASKFLPNLNLLPKLNGGFGDI
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHHHHCCCCCCCCCCCCCHHHH
VDNHLKDPFLRNWVDLLSFLISGMPMHDTNSAAMATLFDEWFKPTSYLEYPKGGSESIVK
HHHHCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHH
ALINAFKKNGGELIVSSKVEAINFRKNIALGVTLENGSKFTSDFVVLNTDIWTSRKLIPQ
HHHHHHHCCCCEEEEECCCCEEEECCCEEEEEEECCCCCCCCCEEEEECCCCCCCCCCHH
ELQKKWKPKAKNINKCGSFLHLHLGFDASGLQNLPIHSIHVDDWGRGITAERNVVVFSIP
HHHHHCCCCCCCHHHHCCEEEEEECCCCCCCCCCCEEEEEECCCCCCCCCCCCEEEEECH
SVLDKSMAPKGKHVLHGYTPANEPWEIWENLNSNDLTYKKLKEERCSIFLKSLRKIIPDI
HHHHHHCCCCCCEEEECCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC
DNRIEIKLLGTPLTHKKFTNTYCGSYGPALSAAQGLFPGCKTPIKNLLTCGASTFPGIGI
CCEEEEEEECCCCCCHHHCCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCC
PAVSASGAYAAEKIIGKKEYKNLLKMIDL
CCCCCCCCHHHHHHHCHHHHHHHHHHHCC
>Mature Secondary Structure
MNKYDVVIVGSGIGGLCCGSILALAGKRVLICEAHSQPGGVAHSFNLKGYKFESGPSLWS
CCCEEEEEEECCCCHHHHHHHHHHHCCEEEEEECCCCCCCCEEEECCCCEEECCCCHHHH
GLGRWPTTNPLGQILRLIDEKVELIKYQGWLVNVPEGNFNLEVGEEPFKSRIKLLRGNRS
CCCCCCCCCHHHHHHHHHHHHHHHHEECCEEEECCCCCEEEEECCHHHHHHHHHHHCCCC
VEEWDSLMSAIKPLSKLVSEIPLLSSSPETINILGFIKLASKFLPNLNLLPKLNGGFGDI
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHHHHCCCCCCCCCCCCCHHHH
VDNHLKDPFLRNWVDLLSFLISGMPMHDTNSAAMATLFDEWFKPTSYLEYPKGGSESIVK
HHHHCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHH
ALINAFKKNGGELIVSSKVEAINFRKNIALGVTLENGSKFTSDFVVLNTDIWTSRKLIPQ
HHHHHHHCCCCEEEEECCCCEEEECCCEEEEEEECCCCCCCCCEEEEECCCCCCCCCCHH
ELQKKWKPKAKNINKCGSFLHLHLGFDASGLQNLPIHSIHVDDWGRGITAERNVVVFSIP
HHHHHCCCCCCCHHHHCCEEEEEECCCCCCCCCCCEEEEEECCCCCCCCCCCCEEEEECH
SVLDKSMAPKGKHVLHGYTPANEPWEIWENLNSNDLTYKKLKEERCSIFLKSLRKIIPDI
HHHHHHCCCCCCEEEECCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC
DNRIEIKLLGTPLTHKKFTNTYCGSYGPALSAAQGLFPGCKTPIKNLLTCGASTFPGIGI
CCEEEEEEECCCCCCHHHCCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCC
PAVSASGAYAAEKIIGKKEYKNLLKMIDL
CCCCCCCCHHHHHHHCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7592436 [H]