| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
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The map label for this gene is 123965506
Identifier: 123965506
GI number: 123965506
Start: 252370
End: 252705
Strand: Reverse
Name: 123965506
Synonym: P9515_02711
Alternate gene names: NA
Gene position: 252705-252370 (Counterclockwise)
Preceding gene: 123965507
Following gene: 123965503
Centisome position: 14.83
GC content: 27.68
Gene sequence:
>336_bases GTGGGAGGAATTCTGGTTTTTCTAATTATGGCAGAAATTGATTTAATAAGAAATTTAGAAAAAATTAGTTTTATGATCCC TAATAGACTTTTAAAACTACAGGGATATCTTTTAAGAGAATACTCTAAAGAATTTCTAGAAATAATTATTTATAAAGGCT TTAGTAGCTCTACAACCCACCAAATTGAAATAGATTCAGAAAAACAAGTTATAGAATTTGACCATTTCTTTACAAAGTTC ATTTTATATGAGGCACCTTTAACCCAAGGATCAGAAGTTATAGTAAGAGAAAATACTGACTCTCTTTTTTTCCTTAACCA AAGAAATTGGAATTAA
Upstream 100 bases:
>100_bases GCTAGCTTTTCTCAACCGATTGCAAAATTCTTAGGATTGTTTGCTTTATTAATATATATTTTAGGTTTACTCCAATGGGC AATAATTAAACTACCTAAAA
Downstream 100 bases:
>100_bases ACTAACTATTTAACTGGTAATAATATTTGCACATCTCTTGCATAATTTGGTATCTTCAATGCCCATCACAGTGTTACTTT GATAATGCCAACATCTATCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 111; Mature: 110
Protein sequence:
>111_residues MGGILVFLIMAEIDLIRNLEKISFMIPNRLLKLQGYLLREYSKEFLEIIIYKGFSSSTTHQIEIDSEKQVIEFDHFFTKF ILYEAPLTQGSEVIVRENTDSLFFLNQRNWN
Sequences:
>Translated_111_residues MGGILVFLIMAEIDLIRNLEKISFMIPNRLLKLQGYLLREYSKEFLEIIIYKGFSSSTTHQIEIDSEKQVIEFDHFFTKF ILYEAPLTQGSEVIVRENTDSLFFLNQRNWN >Mature_110_residues GGILVFLIMAEIDLIRNLEKISFMIPNRLLKLQGYLLREYSKEFLEIIIYKGFSSSTTHQIEIDSEKQVIEFDHFFTKFI LYEAPLTQGSEVIVRENTDSLFFLNQRNWN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13141; Mature: 13010
Theoretical pI: Translated: 4.87; Mature: 4.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGGILVFLIMAEIDLIRNLEKISFMIPNRLLKLQGYLLREYSKEFLEIIIYKGFSSSTTH CCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCEE QIEIDSEKQVIEFDHFFTKFILYEAPLTQGSEVIVRENTDSLFFLNQRNWN EEEECCCCCEEHHHHHHHHHHHHCCCCCCCCEEEEEECCCCEEEEECCCCC >Mature Secondary Structure GGILVFLIMAEIDLIRNLEKISFMIPNRLLKLQGYLLREYSKEFLEIIIYKGFSSSTTH CHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCEE QIEIDSEKQVIEFDHFFTKFILYEAPLTQGSEVIVRENTDSLFFLNQRNWN EEEECCCCCEEHHHHHHHHHHHHCCCCCCCCEEEEEECCCCEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA