| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
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The map label for this gene is 123965419
Identifier: 123965419
GI number: 123965419
Start: 169476
End: 169952
Strand: Reverse
Name: 123965419
Synonym: P9515_01841
Alternate gene names: NA
Gene position: 169952-169476 (Counterclockwise)
Preceding gene: 123965420
Following gene: 123965418
Centisome position: 9.97
GC content: 27.46
Gene sequence:
>477_bases ATGACATTAGAGATTGAAAGGCGATTTCTTATCAAAAATGATCAATGGAAAGCATTTATTACTCATAAAACTTTTATAGA GCAGGGCTACCTTTCATATGATTTAGAAGATTGGATCATCAGAATTAGATTTAATGGCAAAAACTTTAAAATAGCACTTA AAAAACATATTAAGAATTTTACTAATTACGAATATGAATACTCAATACCAAATAGTGAAGGCGAACAAATCATGGCAACT CTTACGAATACAATTAAAAAAGAAAGATTTTTTTTAAAAATTGACCAAAAAGATTGGATTATAGATTGCTTTAAAGATAG AAATTTTCCTTTGGAAATTGCCGAAATTGAGCTTGCTGAAGAAAAAGAACAAATTATTCTTCCGCCTTTTTTAGCAAAAG AAATTACTGGCCTCAAAATATATACCAATTTAAATCTGACAAAAAATCCTTTTTCAAAATGGGGAAACAAAGATTAA
Upstream 100 bases:
>100_bases AATGATTAAGTTCAATAAAAGCATTTCTTATTACATTACTTTGATCAAAAAGCTTGATTGGAAAGGGAATTTATCTTTAA AAAATAATCAACTCAATTAG
Downstream 100 bases:
>100_bases AAAAAAATATCCAAAAAGTTCACTTTTCTTTTATATTTTTTTTATAGTTTAGCAATAGTTTACTCAACATTAATATGTAT GGTCTTTATGACAGGGATGG
Product: hypothetical protein
Products: NA
Alternate protein names: Adenylate Cyclase Family Protein
Number of amino acids: Translated: 158; Mature: 157
Protein sequence:
>158_residues MTLEIERRFLIKNDQWKAFITHKTFIEQGYLSYDLEDWIIRIRFNGKNFKIALKKHIKNFTNYEYEYSIPNSEGEQIMAT LTNTIKKERFFLKIDQKDWIIDCFKDRNFPLEIAEIELAEEKEQIILPPFLAKEITGLKIYTNLNLTKNPFSKWGNKD
Sequences:
>Translated_158_residues MTLEIERRFLIKNDQWKAFITHKTFIEQGYLSYDLEDWIIRIRFNGKNFKIALKKHIKNFTNYEYEYSIPNSEGEQIMAT LTNTIKKERFFLKIDQKDWIIDCFKDRNFPLEIAEIELAEEKEQIILPPFLAKEITGLKIYTNLNLTKNPFSKWGNKD >Mature_157_residues TLEIERRFLIKNDQWKAFITHKTFIEQGYLSYDLEDWIIRIRFNGKNFKIALKKHIKNFTNYEYEYSIPNSEGEQIMATL TNTIKKERFFLKIDQKDWIIDCFKDRNFPLEIAEIELAEEKEQIILPPFLAKEITGLKIYTNLNLTKNPFSKWGNKD
Specific function: Unknown
COG id: COG2954
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19034; Mature: 18903
Theoretical pI: Translated: 8.40; Mature: 8.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLEIERRFLIKNDQWKAFITHKTFIEQGYLSYDLEDWIIRIRFNGKNFKIALKKHIKNF CEEEECEEEEEECCCEEEEEEEHHHHHCCCEEECCCCEEEEEEECCCCEEEEHHHHHHHH TNYEYEYSIPNSEGEQIMATLTNTIKKERFFLKIDQKDWIIDCFKDRNFPLEIAEIELAE CCCEEEEECCCCCCHHHHHHHHHHHHCCEEEEEECCCCEEEEEECCCCCCEEEEEEEECC EKEQIILPPFLAKEITGLKIYTNLNLTKNPFSKWGNKD CCCEEEECCHHHHHCCCEEEEEECCCCCCCHHHCCCCC >Mature Secondary Structure TLEIERRFLIKNDQWKAFITHKTFIEQGYLSYDLEDWIIRIRFNGKNFKIALKKHIKNF EEEECEEEEEECCCEEEEEEEHHHHHCCCEEECCCCEEEEEEECCCCEEEEHHHHHHHH TNYEYEYSIPNSEGEQIMATLTNTIKKERFFLKIDQKDWIIDCFKDRNFPLEIAEIELAE CCCEEEEECCCCCCHHHHHHHHHHHHCCEEEEEECCCCEEEEEECCCCCCEEEEEEEECC EKEQIILPPFLAKEITGLKIYTNLNLTKNPFSKWGNKD CCCEEEECCHHHHHCCCEEEEEECCCCCCCHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA